Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G266000.1 | Wheat | plastid | 44.66 | 50.0 |
| Os01t0655500-01 | Rice | plastid | 52.76 | 47.08 |
| TraesCS3D01G237800.1 | Wheat | plastid | 49.31 | 44.07 |
| HORVU3Hr1G059130.8 | Barley | plastid | 49.31 | 43.93 |
| TraesCS3A01G237400.1 | Wheat | plastid | 48.97 | 43.76 |
| VIT_16s0098g00330.t01 | Wine grape | plastid | 42.59 | 36.87 |
| Solyc03g083420.2.1 | Tomato | cytosol, plastid | 42.41 | 36.72 |
| GSMUA_Achr3P25130_001 | Banana | plastid | 41.9 | 36.43 |
| PGSC0003DMT400023542 | Potato | cytosol | 41.9 | 36.27 |
| KRH64464 | Soybean | plastid | 40.0 | 34.47 |
| KRH53484 | Soybean | plastid | 39.66 | 34.18 |
| Bra003055.1-P | Field mustard | plastid | 39.14 | 34.08 |
| CDY14380 | Canola | plastid | 39.14 | 34.08 |
| CDY35656 | Canola | plastid | 38.97 | 33.98 |
| AT5G53450.1 | Thale cress | plastid | 38.45 | 33.28 |
| Zm00001d044018_P001 | Maize | plastid | 5.86 | 13.03 |
Protein Annotations
| EnsemblPlants:Zm00001d044017_P001 | EnsemblPlants:Zm00001d044017_T001 | EnsemblPlantsGene:Zm00001d044017 | InterPro:PAP/fibrillin_dom | ncoils:Coil | PANTHER:PTHR31161 |
| PANTHER:PTHR31161:SF6 | PFAM:PF04755 | ProteinID:ONM39683.1 | SEG:seg | UniParc:UPI000843EE16 | UniProt:A0A1D6NH00 |
| MapMan:35.1 | : | : | : | : | : |
Description
Probable plastid-lipid-associated protein 14 chloroplastic
Coordinates
chr3:-:216717307..216725476
Molecular Weight (calculated)
65686.6 Da
IEP (calculated)
7.286
GRAVY (calculated)
-0.159
Length
580 amino acids
Sequence
(BLAST)
(BLAST)
001: MRESARAVQS EKEVLESSFN KLKMESEMCK QEMEATLQCQ LKELEALQSR KVELEAKVGS LEADLSKAVA RNHELELEVG KLEAEMAVTK EEVEKLQAWF
101: AEQDQKQFVV AAEVARLQSE IDQSAKANKA AVVAHEAELE MLKVNVDMVL EITRQRQLAA ENELELSRVK QDFESLRTYV STLVGILGNA ADFQDNDLSS
201: STIASNNDRR KMMIAFDMRC VGFIMAKMVL RELMDPSTFF KFKSFLTKML DRQWGAGWNL LALLLATKPE ERISCVDALR HPFLCGPKWR INPSANLIRW
301: GLGSTAVRMA EDYIYGRHQR RRLSYFVELM EVLNPSLRTQ NWLHLLPGRW RLLYCTGRHI GLTLRQPSPR VLISAVYLTV SSESVDQVFS LTSDVGFRIM
401: PEPNWPHDKS GSEGVLSVTA SARIAAGRIY INEHDSKEDM VTSSMRYLHG NKWRKFSQIK ELPSSLPAVN IAMDEIHVSI SCTSTMTVNS AQKALKEIRT
501: QTPPEMFDLS KIVCGTYIDA RLMILRGVNG STANCNPVSL KKDFFLQALH WWRSDVFLIQ GATVGLSMYL LLSFDLVVVV
101: AEQDQKQFVV AAEVARLQSE IDQSAKANKA AVVAHEAELE MLKVNVDMVL EITRQRQLAA ENELELSRVK QDFESLRTYV STLVGILGNA ADFQDNDLSS
201: STIASNNDRR KMMIAFDMRC VGFIMAKMVL RELMDPSTFF KFKSFLTKML DRQWGAGWNL LALLLATKPE ERISCVDALR HPFLCGPKWR INPSANLIRW
301: GLGSTAVRMA EDYIYGRHQR RRLSYFVELM EVLNPSLRTQ NWLHLLPGRW RLLYCTGRHI GLTLRQPSPR VLISAVYLTV SSESVDQVFS LTSDVGFRIM
401: PEPNWPHDKS GSEGVLSVTA SARIAAGRIY INEHDSKEDM VTSSMRYLHG NKWRKFSQIK ELPSSLPAVN IAMDEIHVSI SCTSTMTVNS AQKALKEIRT
501: QTPPEMFDLS KIVCGTYIDA RLMILRGVNG STANCNPVSL KKDFFLQALH WWRSDVFLIQ GATVGLSMYL LLSFDLVVVV
001: MALCGVCSTP NLPNLQVFRS VRNSSIGYKR NHSLWQLRSS SFRAKSVIFH CSSSLRQSPS NVEEIDDNPS VSLEDESAHV MQFKWSDFRI LDRVSIGHGG
101: RADELVFEAI VQVPDSPLFN QGVVLRKLNT TRAQRRGRRA IEVFKKLVRR RLLYHSYSMQ VHGYITNNLS DDQYSFTLVH GCHGSFSIRH WLQQSDWIPT
201: LEATLALDEE SFRRVGDDTT GGPAVSRQLR LIRTLMRDIL IGVNYLHSHG LAHTELRLEN VHISPVDRHI KVGILGNAAD FNGDVPSTSN AYSTMDRRQM
301: MIAFDMRCVG FMMAKMVLQE LMDPLIFAKL KSFLAKGNDP SSLREFFVTT LNTNSESGNT GVQILDRNWG AGWHLLSLLI ATRPSERISC LDALKHPFLC
401: GPRWRVAPSM DIIRWGLGST AVKISEEYIY RMPQRQRLAH FIGLMEMLNP YPKPNCWLEL LPGRWRLLYS TGKHIGLTLR QPSTRALIGN VHLTITRASE
501: SINNTSLSFT SDIRFTAITS KDWPHNKIGA AGKLQTLSQF RLIAGKRLYL KEEKKNIGKF SMGEPDAEEG LAEKLETEKW KKVVPFKEFP SSLPVAKLVS
601: GEIEVTMNMN DHIDSPGSVI GEVRKQIPPE MFDLSKLVCG TYIDSRLLVL RCVNGSALLF TRSSLDHKSM
101: RADELVFEAI VQVPDSPLFN QGVVLRKLNT TRAQRRGRRA IEVFKKLVRR RLLYHSYSMQ VHGYITNNLS DDQYSFTLVH GCHGSFSIRH WLQQSDWIPT
201: LEATLALDEE SFRRVGDDTT GGPAVSRQLR LIRTLMRDIL IGVNYLHSHG LAHTELRLEN VHISPVDRHI KVGILGNAAD FNGDVPSTSN AYSTMDRRQM
301: MIAFDMRCVG FMMAKMVLQE LMDPLIFAKL KSFLAKGNDP SSLREFFVTT LNTNSESGNT GVQILDRNWG AGWHLLSLLI ATRPSERISC LDALKHPFLC
401: GPRWRVAPSM DIIRWGLGST AVKISEEYIY RMPQRQRLAH FIGLMEMLNP YPKPNCWLEL LPGRWRLLYS TGKHIGLTLR QPSTRALIGN VHLTITRASE
501: SINNTSLSFT SDIRFTAITS KDWPHNKIGA AGKLQTLSQF RLIAGKRLYL KEEKKNIGKF SMGEPDAEEG LAEKLETEKW KKVVPFKEFP SSLPVAKLVS
601: GEIEVTMNMN DHIDSPGSVI GEVRKQIPPE MFDLSKLVCG TYIDSRLLVL RCVNGSALLF TRSSLDHKSM
Arabidopsis Description
PAP14Probable plastid-lipid-associated protein 14, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LV04]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.