Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G237400.1 | Wheat | plastid | 98.0 | 98.0 |
| TraesCS3B01G266000.1 | Wheat | plastid | 77.35 | 96.91 |
| HORVU3Hr1G059130.8 | Barley | plastid | 95.53 | 95.24 |
| Zm00001d044018_P001 | Maize | plastid | 34.36 | 85.44 |
| EES01191 | Sorghum | plastid | 80.59 | 80.83 |
| Os01t0655500-01 | Rice | plastid | 80.12 | 80.0 |
| GSMUA_Achr3P25130_001 | Banana | plastid | 64.25 | 62.52 |
| VIT_16s0098g00330.t01 | Wine grape | plastid | 59.78 | 57.91 |
| CDY14380 | Canola | plastid | 55.62 | 54.2 |
| CDY35656 | Canola | plastid | 55.32 | 53.98 |
| Bra003055.1-P | Field mustard | plastid | 55.32 | 53.9 |
| KRH64464 | Soybean | plastid | 55.78 | 53.79 |
| KRH53484 | Soybean | plastid | 55.78 | 53.79 |
| PGSC0003DMT400023542 | Potato | cytosol | 55.47 | 53.73 |
| Solyc03g083420.2.1 | Tomato | cytosol, plastid | 55.32 | 53.58 |
| AT5G53450.1 | Thale cress | plastid | 53.77 | 52.09 |
| Zm00001d044017_P001 | Maize | cytosol | 44.07 | 49.31 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:50.2.7 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf |
| PFAM:PF00069 | PFscan:PS50011 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF335 | InterPro:Prot_kinase_dom | SMART:SM00220 |
| SUPFAM:SSF56112 | EnsemblPlantsGene:TraesCS3D01G237800 | EnsemblPlants:TraesCS3D01G237800.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3D:+:329439701..329447823
Molecular Weight (calculated)
71750.6 Da
IEP (calculated)
9.507
GRAVY (calculated)
-0.206
Length
649 amino acids
Sequence
(BLAST)
(BLAST)
001: MALAAAAVAA ARPSPTGLPR PLCRASAHPC RPRRFRLEAS LSASTPAPAP ATADEGAAAG PCPVVRFDMA DFTVADRVSV GLHGRSDEMI FEATVRDPSS
101: ELYGSTVVLR QLTSSQAKRR GRRALEVLKK LAHRQMMYHS YAMQVHGYVT PSKAMEEGDS PLVLVHGYHG SYSLRHWLQL SDWLPTLEAT LALDEEQVRR
201: VGDDSVGGPA VTRQLRLIRI LMRDLLIGVN YLHSHGMAHT ELRLENVHVS PVDKHVKVGI LGNAVDFHDN DPSSSAVASN NERRKMMIAF DMRCVGFIMA
301: KMVLRELMDS STFQKFKSFL NKGNDPSCLR EFLLPILSQN SPSGNIGLQM LDRHWGAGWN LLALLLATKS DKRISCVDAL RHPFLCGPKW RISPTVNVVR
401: WGLGSTAVRL AEDYIYGHHQ RRRLAYFIEL MEVLNPNSST ENWLRLLPGR WCLLYCTGRH IGLTLRQPTP RVLISDAFLT FAEAPESVDP ILSLTSDIGF
501: KIMPESDWPH DKSGTEGNLS VTTSARITPG RIYTNAEDGK ESSSRITSSR YLGGKWGKAA KMKQLPASLP TASVNVDEND VDVSMSCGST LKVKSARKVL
601: QEVRTQTPPE MFDLSKIVCG TYIDSRLMVL RGVNGSALLF VRSNRTSDP
101: ELYGSTVVLR QLTSSQAKRR GRRALEVLKK LAHRQMMYHS YAMQVHGYVT PSKAMEEGDS PLVLVHGYHG SYSLRHWLQL SDWLPTLEAT LALDEEQVRR
201: VGDDSVGGPA VTRQLRLIRI LMRDLLIGVN YLHSHGMAHT ELRLENVHVS PVDKHVKVGI LGNAVDFHDN DPSSSAVASN NERRKMMIAF DMRCVGFIMA
301: KMVLRELMDS STFQKFKSFL NKGNDPSCLR EFLLPILSQN SPSGNIGLQM LDRHWGAGWN LLALLLATKS DKRISCVDAL RHPFLCGPKW RISPTVNVVR
401: WGLGSTAVRL AEDYIYGHHQ RRRLAYFIEL MEVLNPNSST ENWLRLLPGR WCLLYCTGRH IGLTLRQPTP RVLISDAFLT FAEAPESVDP ILSLTSDIGF
501: KIMPESDWPH DKSGTEGNLS VTTSARITPG RIYTNAEDGK ESSSRITSSR YLGGKWGKAA KMKQLPASLP TASVNVDEND VDVSMSCGST LKVKSARKVL
601: QEVRTQTPPE MFDLSKIVCG TYIDSRLMVL RGVNGSALLF VRSNRTSDP
001: MALCGVCSTP NLPNLQVFRS VRNSSIGYKR NHSLWQLRSS SFRAKSVIFH CSSSLRQSPS NVEEIDDNPS VSLEDESAHV MQFKWSDFRI LDRVSIGHGG
101: RADELVFEAI VQVPDSPLFN QGVVLRKLNT TRAQRRGRRA IEVFKKLVRR RLLYHSYSMQ VHGYITNNLS DDQYSFTLVH GCHGSFSIRH WLQQSDWIPT
201: LEATLALDEE SFRRVGDDTT GGPAVSRQLR LIRTLMRDIL IGVNYLHSHG LAHTELRLEN VHISPVDRHI KVGILGNAAD FNGDVPSTSN AYSTMDRRQM
301: MIAFDMRCVG FMMAKMVLQE LMDPLIFAKL KSFLAKGNDP SSLREFFVTT LNTNSESGNT GVQILDRNWG AGWHLLSLLI ATRPSERISC LDALKHPFLC
401: GPRWRVAPSM DIIRWGLGST AVKISEEYIY RMPQRQRLAH FIGLMEMLNP YPKPNCWLEL LPGRWRLLYS TGKHIGLTLR QPSTRALIGN VHLTITRASE
501: SINNTSLSFT SDIRFTAITS KDWPHNKIGA AGKLQTLSQF RLIAGKRLYL KEEKKNIGKF SMGEPDAEEG LAEKLETEKW KKVVPFKEFP SSLPVAKLVS
601: GEIEVTMNMN DHIDSPGSVI GEVRKQIPPE MFDLSKLVCG TYIDSRLLVL RCVNGSALLF TRSSLDHKSM
101: RADELVFEAI VQVPDSPLFN QGVVLRKLNT TRAQRRGRRA IEVFKKLVRR RLLYHSYSMQ VHGYITNNLS DDQYSFTLVH GCHGSFSIRH WLQQSDWIPT
201: LEATLALDEE SFRRVGDDTT GGPAVSRQLR LIRTLMRDIL IGVNYLHSHG LAHTELRLEN VHISPVDRHI KVGILGNAAD FNGDVPSTSN AYSTMDRRQM
301: MIAFDMRCVG FMMAKMVLQE LMDPLIFAKL KSFLAKGNDP SSLREFFVTT LNTNSESGNT GVQILDRNWG AGWHLLSLLI ATRPSERISC LDALKHPFLC
401: GPRWRVAPSM DIIRWGLGST AVKISEEYIY RMPQRQRLAH FIGLMEMLNP YPKPNCWLEL LPGRWRLLYS TGKHIGLTLR QPSTRALIGN VHLTITRASE
501: SINNTSLSFT SDIRFTAITS KDWPHNKIGA AGKLQTLSQF RLIAGKRLYL KEEKKNIGKF SMGEPDAEEG LAEKLETEKW KKVVPFKEFP SSLPVAKLVS
601: GEIEVTMNMN DHIDSPGSVI GEVRKQIPPE MFDLSKLVCG TYIDSRLLVL RCVNGSALLF TRSSLDHKSM
Arabidopsis Description
PAP14Probable plastid-lipid-associated protein 14, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LV04]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.