Factsheet for Solyc03g083420.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g008950.2.1
Solyc03g005240.1.1
Solyc06g053930.2.1
Solyc10g077010.1.1
Solyc10g081170.1.1
Solyc11g072240.1.1
Solyc12g099990.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G53450.1	Solyc01g008950.2.1	AT2G41090.1	17360592
AT5G53450.1	Solyc10g077010.1.1	AT2G41090.1	17360592
AT5G53450.1	Solyc10g081170.1.1	AT2G41090.1	17360592
AT5G53450.1	Solyc11g072240.1.1	AT2G41090.1	17360592
AT5G53450.1	Solyc12g099990.1.1	AT2G41090.1	17360592
AT5G53450.1	Solyc01g008950.2.1	AT2G41100.1	17360592
AT5G53450.1	Solyc10g077010.1.1	AT2G41100.1	17360592
AT5G53450.1	Solyc10g081170.1.1	AT2G41100.1	17360592
AT5G53450.1	Solyc11g072240.1.1	AT2G41100.1	17360592
AT5G53450.1	Solyc12g099990.1.1	AT2G41100.1	17360592
AT5G53450.1	Solyc03g005240.1.1	AT4G14640.1	17360592
AT5G53450.1	Solyc06g053930.2.1	AT4G14640.1	17360592
AT5G53450.1	Solyc01g008950.2.1	AT5G21274.1	17360592
AT5G53450.1	Solyc10g077010.1.1	AT5G21274.1	17360592
AT5G53450.1	Solyc10g081170.1.1	AT5G21274.1	17360592
AT5G53450.1	Solyc11g072240.1.1	AT5G21274.1	17360592
AT5G53450.1	Solyc12g099990.1.1	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400023542	Potato	cytosol	95.52	95.52
VIT_16s0098g00330.t01	Wine grape	plastid	66.12	66.12
CDY14380	Canola	plastid	61.94	62.31
CDY35656	Canola	plastid	61.49	61.95
Bra003055.1-P	Field mustard	plastid	61.49	61.86
KRH64464	Soybean	plastid	61.94	61.66
KRH53484	Soybean	plastid	61.94	61.66
AT5G53450.1	Thale cress	plastid	60.9	60.9
Os01t0655500-01	Rice	plastid	55.97	57.69
GSMUA_Achr3P25130_001	Banana	plastid	57.31	57.57
EES01191	Sorghum	plastid	55.22	57.19
TraesCS3A01G237400.1	Wheat	plastid	53.88	55.62
TraesCS3D01G237800.1	Wheat	plastid	53.58	55.32
HORVU3Hr1G059130.8	Barley	plastid	53.73	55.3
Zm00001d044018_P001	Maize	plastid	20.3	52.11
TraesCS3B01G266000.1	Wheat	plastid	38.96	50.39
Zm00001d044017_P001	Maize	cytosol	36.72	42.41

Protein Annotations

Gene3D:1.10.510.10	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004693	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049	GO:GO:0007346	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010468	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	UniProt:K4BIB8	InterPro:Kinase-like_dom_sf	InterPro:PAP/fibrillin_dom	PFAM:PF04755	PFscan:PS50011
PANTHER:PTHR24056	PANTHER:PTHR24056:SF335	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	EnsemblPlantsGene:Solyc03g083420.2
EnsemblPlants:Solyc03g083420.2.1	UniParc:UPI0002768B0C	SEG:seg	:	:	:

Description

Probable plastid-lipid-associated protein 14, chloroplastic [Source:Projected from Arabidopsis thaliana (AT5G53450) UniProtKB/Swiss-Prot;Acc:Q9LV04]

Coordinates

chr3:+:53289999..53297011

Molecular Weight (calculated)

75860.3 Da

IEP (calculated)

10.119

GRAVY (calculated)

-0.214

Length

670 amino acids

Sequence
(BLAST)

001: MAAIGVYSTP KMEYVEGRCI SSIHSSTSLK LWPMIGRTGF PIRRKRLEVN CSLPNTMSPL ESEEDAATLS SSDSLEDEFS HVTKFKMSDF KIRNRVSIGL
101: GGRGDEIVFE AMVNDPHSPL YKTRVVLRQL ISPRAKRRGH RAIEVLKRLG RRKLMYHSYS MQVHGYICSS MIDENSSFTL VHGHHGSASL RHWLQRSDWL
201: PTLEATLSLD QESVRRVGDD TIGGPAISRQ LRLIRILMRD LLIGVNYVHS HGLAHTELRL ENLHISAVDK HIKVGILGNA SDFNEADPAD NTSYDNMDRR
301: RMMIAFDMRC VGFIMAKMVL RELMDPTIFA KFKAFLTKGN DPSCLREFLL HAVKRNSSVG NFGIQILDRN WGAGWHLLSV LLAPKPLDRI SCLNALRHPF
401: LCGPKWRVNP SIDLIRWSLG STTVRIAEEY IYGQQQRSRL AHFVELMEML NPYPKPKHWL GLLPGKWRLL YCTGRHIGLT LRQPSVRVLI GEVYLTMSKV
501: SQPKTTFSAA SHISFTVMAG RDWAHDKSGV GGELQVNSFF RLRAGRRLYL EEETISSKFP SATQDAQASV LKRLSSKKWR KAIPIYEIPS SLSVAKLVSD
601: EIDVMMSLNK PLNGNMEVAQ KAIQEVRTQI PPEMFDLSKI VCGTYLDSRL LVLRSVNGSA LFFHRCTNDS

Best Arabidopsis Sequence Match ( AT5G53450.1 )
(BLAST)

001: MALCGVCSTP NLPNLQVFRS VRNSSIGYKR NHSLWQLRSS SFRAKSVIFH CSSSLRQSPS NVEEIDDNPS VSLEDESAHV MQFKWSDFRI LDRVSIGHGG
101: RADELVFEAI VQVPDSPLFN QGVVLRKLNT TRAQRRGRRA IEVFKKLVRR RLLYHSYSMQ VHGYITNNLS DDQYSFTLVH GCHGSFSIRH WLQQSDWIPT
201: LEATLALDEE SFRRVGDDTT GGPAVSRQLR LIRTLMRDIL IGVNYLHSHG LAHTELRLEN VHISPVDRHI KVGILGNAAD FNGDVPSTSN AYSTMDRRQM
301: MIAFDMRCVG FMMAKMVLQE LMDPLIFAKL KSFLAKGNDP SSLREFFVTT LNTNSESGNT GVQILDRNWG AGWHLLSLLI ATRPSERISC LDALKHPFLC
401: GPRWRVAPSM DIIRWGLGST AVKISEEYIY RMPQRQRLAH FIGLMEMLNP YPKPNCWLEL LPGRWRLLYS TGKHIGLTLR QPSTRALIGN VHLTITRASE
501: SINNTSLSFT SDIRFTAITS KDWPHNKIGA AGKLQTLSQF RLIAGKRLYL KEEKKNIGKF SMGEPDAEEG LAEKLETEKW KKVVPFKEFP SSLPVAKLVS
601: GEIEVTMNMN DHIDSPGSVI GEVRKQIPPE MFDLSKLVCG TYIDSRLLVL RCVNGSALLF TRSSLDHKSM

Arabidopsis Description

PAP14Probable plastid-lipid-associated protein 14, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LV04]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.