CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G53450.1	KRG89812	AT2G41090.1	17360592
AT5G53450.1	KRG94975	AT2G41090.1	17360592
AT5G53450.1	KRH18664	AT2G41090.1	17360592
AT5G53450.1	KRG89812	AT2G41100.1	17360592
AT5G53450.1	KRG94975	AT2G41100.1	17360592
AT5G53450.1	KRH18664	AT2G41100.1	17360592
AT5G53450.1	KRH31638	AT4G14640.1	17360592
AT5G53450.1	KRH69070	AT4G14640.1	17360592
AT5G53450.1	KRG89812	AT5G21274.1	17360592
AT5G53450.1	KRG94975	AT5G21274.1	17360592
AT5G53450.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53484	Soybean	plastid	94.5	94.5
VIT_16s0098g00330.t01	Wine grape	plastid	69.99	70.3
CDY14380	Canola	plastid	65.08	65.77
CDY35656	Canola	plastid	64.93	65.71
Bra003055.1-P	Field mustard	plastid	64.49	65.17
AT5G53450.1	Thale cress	plastid	64.78	65.07
Solyc03g083420.2.1	Tomato	cytosol, plastid	61.66	61.94
PGSC0003DMT400023542	Potato	cytosol	60.33	60.6
GSMUA_Achr3P25130_001	Banana	plastid	58.25	58.77
Os01t0655500-01	Rice	plastid	54.53	56.46
EES01191	Sorghum	plastid	54.09	56.26
TraesCS3A01G237400.1	Wheat	plastid	53.79	55.78
TraesCS3D01G237800.1	Wheat	plastid	53.79	55.78
HORVU3Hr1G059130.8	Barley	plastid	53.79	55.61
Zm00001d044018_P001	Maize	plastid	21.25	54.79
TraesCS3B01G266000.1	Wheat	plastid	39.67	51.54
Zm00001d044017_P001	Maize	cytosol	34.47	40.0

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100809306	MapMan:35.1	EMBL:ACUP02002766	EnsemblPlantsGene:GLYMA_04G236600	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004693	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006468
GO:GO:0007049	GO:GO:0007346	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010468
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	UniProt:K7KLY1	ProteinID:KRH64462.1
ProteinID:KRH64463.1	EnsemblPlants:KRH64464	ProteinID:KRH64464	ProteinID:KRH64464.1	ProteinID:KRH64465.1	InterPro:Kinase-like_dom_sf
InterPro:PAP/fibrillin_dom	PFAM:PF04755	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF335	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	UniParc:UPI000233A371	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:-:50502908..50508787

Molecular Weight (calculated)

75924.5 Da

IEP (calculated)

10.404

GRAVY (calculated)

-0.224

Length

673 amino acids

Sequence
(BLAST)

001: MALCRTGPNP IPGSYSAQNL STKLIVPAPL RFTRQFSNLV RRKRKGVCCS SLRNAASASS KESLEDAPTT LSVCLEEETD HVIQFKMSDF KILDTVSVGL
101: GGRPDEVIFE GMVKDSGSSL CNTRVVLRQL SSAQAQRRGK RAIEVLKKLV RRKLLYHSYS MQVHGYISLP ASDASGSFIL VHGYHGSFSL RHWLQQSDWL
201: PTLEATLALD EESVRKVGED FTGGPAVSRQ LRLVRILMRD LLIGVNYLHS HGLAHTELRL ENVHISPIDR HIKVGILGNA ADFYKDGSNG SSLDNLDRRQ
301: MMIAFDMRCM GFIMAKMVMR ELMDPLIFAK FKSFLTKGYD PSCLREFILE ILGRSSPYGN AGLQILDRNW GAGWHLLSLL LATKPSQRIS CLDALRHPFL
401: CGPRWRVVPS MDIIRWGLGS TAMRIREKYI YRQPQQSRLA HFIDLMEMLN PHPQPRNWLE LLPGKWRLLY STGKHVGLTL RQPPLRVLVS DVHLTVTRES
501: KLKDNLSFGS DIGFSVMIGQ DWPHDKAGKS GRLQVNSLFT LRSGRRLYLK QDKTTEKFFF GPSSNVEALA QKFKGKKWRK IVPFKEFPSS LPAAKLASGD
601: IDVRMNLDDP LNRNVDTARN VLQELRTQIP PEIFDLSRLV CGTYVDSRML VLRGVNGSAL LFTRSFVDRN GSS

Best Arabidopsis Sequence Match ( AT5G53450.1 )
(BLAST)

001: MALCGVCSTP NLPNLQVFRS VRNSSIGYKR NHSLWQLRSS SFRAKSVIFH CSSSLRQSPS NVEEIDDNPS VSLEDESAHV MQFKWSDFRI LDRVSIGHGG
101: RADELVFEAI VQVPDSPLFN QGVVLRKLNT TRAQRRGRRA IEVFKKLVRR RLLYHSYSMQ VHGYITNNLS DDQYSFTLVH GCHGSFSIRH WLQQSDWIPT
201: LEATLALDEE SFRRVGDDTT GGPAVSRQLR LIRTLMRDIL IGVNYLHSHG LAHTELRLEN VHISPVDRHI KVGILGNAAD FNGDVPSTSN AYSTMDRRQM
301: MIAFDMRCVG FMMAKMVLQE LMDPLIFAKL KSFLAKGNDP SSLREFFVTT LNTNSESGNT GVQILDRNWG AGWHLLSLLI ATRPSERISC LDALKHPFLC
401: GPRWRVAPSM DIIRWGLGST AVKISEEYIY RMPQRQRLAH FIGLMEMLNP YPKPNCWLEL LPGRWRLLYS TGKHIGLTLR QPSTRALIGN VHLTITRASE
501: SINNTSLSFT SDIRFTAITS KDWPHNKIGA AGKLQTLSQF RLIAGKRLYL KEEKKNIGKF SMGEPDAEEG LAEKLETEKW KKVVPFKEFP SSLPVAKLVS
601: GEIEVTMNMN DHIDSPGSVI GEVRKQIPPE MFDLSKLVCG TYIDSRLLVL RCVNGSALLF TRSSLDHKSM

Arabidopsis Description

PAP14Probable plastid-lipid-associated protein 14, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LV04]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.