Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER95817 | Sorghum | nucleus | 70.62 | 70.62 |
| TraesCS2B01G276000.1 | Wheat | cytosol, nucleus, plastid | 57.73 | 59.57 |
| TraesCS2D01G257700.1 | Wheat | mitochondrion, nucleus, plastid | 56.7 | 58.51 |
| TraesCS2A01G266100.1 | Wheat | cytosol | 49.48 | 58.18 |
| HORVU2Hr1G061800.1 | Barley | plastid | 56.19 | 57.37 |
| TraesCS2A01G266000.1 | Wheat | plastid | 55.67 | 56.25 |
| TraesCS2B01G276100.1 | Wheat | cytosol, extracellular, plastid | 54.12 | 55.85 |
| TraesCS1A01G436300.1 | Wheat | mitochondrion | 54.12 | 55.26 |
| TraesCS2D01G257800.1 | Wheat | plastid | 54.64 | 55.21 |
| Os07t0123100-00 | Rice | extracellular | 58.25 | 55.12 |
| TraesCS1A01G436400.1 | Wheat | plastid | 53.61 | 55.03 |
| TraesCS1D01G444700.1 | Wheat | cytosol, extracellular, peroxisome, plastid | 52.58 | 54.84 |
| HORVU1Hr1G094330.1 | Barley | cytosol | 52.58 | 54.55 |
| Zm00001d007974_P001 | Maize | nucleus | 54.12 | 54.4 |
| TraesCS1B01G471500.1 | Wheat | mitochondrion | 51.03 | 53.51 |
| TraesCS1D01G444800.1 | Wheat | cytosol, plastid | 51.03 | 53.23 |
| Zm00001d034190_P001 | Maize | cytosol | 47.42 | 50.55 |
| Zm00001d013178_P001 | Maize | cytosol | 45.88 | 47.85 |
| Zm00001d013311_P001 | Maize | plastid | 36.08 | 43.75 |
| Zm00001d033943_P001 | Maize | plastid | 35.57 | 41.57 |
| GSMUA_Achr2P08730_001 | Banana | cytosol | 30.93 | 36.14 |
| GSMUA_Achr7P27420_001 | Banana | cytosol | 30.41 | 35.76 |
| CDY45243 | Canola | cytosol | 24.23 | 33.57 |
| CDY28982 | Canola | nucleus | 26.29 | 32.69 |
| CDX77946 | Canola | cytosol | 24.74 | 32.43 |
| CDX81387 | Canola | cytosol | 25.77 | 32.26 |
| Bra012084.1-P | Field mustard | cytosol | 23.2 | 32.14 |
| Bra031814.1-P | Field mustard | cytosol | 24.74 | 31.79 |
| CDY55087 | Canola | cytosol | 24.74 | 31.79 |
| Bra036862.1-P | Field mustard | cytosol | 24.23 | 31.76 |
| Solyc02g089990.1.1 | Tomato | nucleus | 26.29 | 31.68 |
| AT3G50800.1 | Thale cress | cytosol, nucleus, plastid | 24.74 | 31.58 |
| PGSC0003DMT400026013 | Potato | cytosol, nucleus, plastid | 26.29 | 31.48 |
| CDX73789 | Canola | cytosol | 24.74 | 31.37 |
| Bra037163.1-P | Field mustard | cytosol | 24.74 | 30.97 |
| CDY18612 | Canola | cytosol | 24.74 | 30.97 |
| Bra012887.1-P | Field mustard | cytosol, nucleus, plastid | 24.74 | 30.77 |
| CDX90684 | Canola | cytosol, nucleus, plastid | 24.74 | 30.77 |
| VIT_00s0207g00140.t01 | Wine grape | cytosol | 25.77 | 30.67 |
| Bra017789.1-P | Field mustard | nucleus | 26.8 | 30.41 |
| CDX72612 | Canola | nucleus | 26.8 | 30.41 |
| PGSC0003DMT400059007 | Potato | cytosol, nucleus, plastid | 22.68 | 30.34 |
| AT5G66580.1 | Thale cress | cytosol | 24.23 | 30.13 |
| CDY39665 | Canola | cytosol | 25.26 | 30.06 |
| VIT_00s0207g00180.t01 | Wine grape | cytosol | 25.26 | 30.06 |
| Bra032151.1-P | Field mustard | cytosol | 25.26 | 30.06 |
| CDY42708 | Canola | nucleus | 26.29 | 29.82 |
| Solyc03g044860.1.1 | Tomato | cytosol | 22.16 | 29.45 |
| CDX89594 | Canola | cytosol | 24.74 | 29.45 |
| AT2G23690.1 | Thale cress | cytosol | 24.74 | 29.45 |
| CDY28078 | Canola | cytosol | 24.23 | 29.38 |
| AT4G37240.1 | Thale cress | cytosol, nucleus, plastid | 25.26 | 29.17 |
| KRH76906 | Soybean | cytosol | 23.71 | 28.93 |
| KRH28562 | Soybean | cytosol | 24.23 | 28.83 |
| CDX76853 | Canola | cytosol | 24.23 | 28.66 |
| KRH08345 | Soybean | cytosol | 25.26 | 28.66 |
| KRH69989 | Soybean | cytosol | 24.23 | 28.48 |
| PGSC0003DMT400007187 | Potato | cytosol | 22.16 | 28.29 |
| Solyc02g065430.1.1 | Tomato | cytosol | 22.16 | 28.29 |
| CDY46066 | Canola | cytosol | 23.71 | 28.22 |
| CDY22462 | Canola | cytosol, nucleus, plastid | 24.74 | 27.75 |
| Bra039208.1-P | Field mustard | cytosol | 19.59 | 27.34 |
| VIT_03s0063g01940.t01 | Wine grape | cytosol | 24.23 | 27.01 |
| CDX69254 | Canola | cytosol | 24.74 | 26.97 |
| CDX75606 | Canola | nucleus | 24.23 | 26.86 |
| Bra011715.1-P | Field mustard | nucleus | 24.23 | 26.86 |
| Bra010578.1-P | Field mustard | cytosol, nucleus, plastid | 20.62 | 26.67 |
| CDY24764 | Canola | cytosol, nucleus, plastid | 23.71 | 26.59 |
| Zm00001d020967_P001 | Maize | plastid | 31.44 | 26.07 |
| Zm00001d046687_P001 | Maize | plastid | 27.32 | 25.36 |
| Zm00001d036787_P001 | Maize | plastid | 26.8 | 23.96 |
| Zm00001d015867_P001 | Maize | plastid | 25.77 | 23.36 |
| Zm00001d020968_P001 | Maize | plastid | 26.29 | 22.47 |
Protein Annotations
| EMBL:EU952890 | EnsemblPlants:Zm00001d018717_P001 | EnsemblPlants:Zm00001d018717_T001 | EnsemblPlantsGene:Zm00001d018717 | EntrezGene:100274805 | InterPro:DUF4228_plant |
| PANTHER:PTHR33052 | PANTHER:PTHR33052:SF62 | PFAM:PF14009 | ProteinID:ONM51165.1 | SEG:seg | UniParc:UPI000182B4CE |
| UniProt:B6SJH5 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr7:+:3068238..3068822
Molecular Weight (calculated)
19993.8 Da
IEP (calculated)
8.334
GRAVY (calculated)
-0.129
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLCVSLGGT AGAEAARAAA PSCKCGTALV LMPSGDMREY PFPATTAARV LEDASAAADG GDGWLLCDAD GMGFEGPAPP AVPHAEPLRA GQLYFVLPAA
101: ARRRGLRREE VAALAVRASA ALSSRASASA SAAPGRRRRG AVVAPLVFAP PPEDEEEERE QQKSTALAAP PVRRPARPGR RLVRFASDLT AIPE
101: ARRRGLRREE VAALAVRASA ALSSRASASA SAAPGRRRRG AVVAPLVFAP PPEDEEEERE QQKSTALAAP PVRRPARPGR RLVRFASDLT AIPE
001: MGICVSFRRE DSNSSPTVKI VTVNGDLREY NVPVIASQVL EAESAAAYSS SSSSRPSSYF ICDSDSLYYD DFIPAIKSEE PLQADQIYFV LPISKRQSRL
101: TASDMAALAV KASVAIQNSV KKESRRRKKV RISPVMMLTG SNDSVNGNGS ETTVKKGRPF VSKTAPVKAS SGINRSGSVR NLRRYTSKRA KLAVRSFRLK
201: LSTIYEGSVV
101: TASDMAALAV KASVAIQNSV KKESRRRKKV RISPVMMLTG SNDSVNGNGS ETTVKKGRPF VSKTAPVKAS SGINRSGSVR NLRRYTSKRA KLAVRSFRLK
201: LSTIYEGSVV
Arabidopsis Description
At1g21010 [Source:UniProtKB/TrEMBL;Acc:Q7XJ58]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.