Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER96983 | Sorghum | cytosol | 72.25 | 70.69 |
| Zm00001d020967_P001 | Maize | plastid | 40.53 | 39.32 |
| Zm00001d046687_P001 | Maize | plastid | 29.52 | 32.06 |
| Zm00001d013311_P001 | Maize | plastid | 22.47 | 31.88 |
| Zm00001d033943_P001 | Maize | plastid | 21.59 | 29.52 |
| Zm00001d036787_P001 | Maize | plastid | 28.19 | 29.49 |
| Zm00001d034190_P001 | Maize | cytosol | 23.35 | 29.12 |
| Zm00001d013178_P001 | Maize | cytosol | 22.91 | 27.96 |
| Zm00001d015867_P001 | Maize | plastid | 25.99 | 27.57 |
| Zm00001d018717_P001 | Maize | cytosol | 22.47 | 26.29 |
| Solyc01g109250.2.1 | Tomato | extracellular | 17.18 | 26.0 |
| PGSC0003DMT400064780 | Potato | extracellular | 17.62 | 25.81 |
| KRH24527 | Soybean | cytosol | 15.42 | 24.48 |
| KRH29531 | Soybean | cytosol | 15.42 | 24.31 |
| Zm00001d007974_P001 | Maize | nucleus | 19.82 | 23.32 |
| KRH76905 | Soybean | plastid | 13.66 | 21.23 |
| KRH28563 | Soybean | plastid | 13.66 | 21.09 |
| VIT_03s0063g01950.t01 | Wine grape | plastid | 16.3 | 18.78 |
Protein Annotations
| EnsemblPlants:Zm00001d020968_P001 | EnsemblPlants:Zm00001d020968_T001 | EnsemblPlantsGene:Zm00001d020968 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF15 |
| PFAM:PF14009 | ProteinID:ONM55965.1 | SEG:seg | UniParc:UPI000843A6A7 | UniProt:A0A1D6I7C4 | MapMan:35.2 |
Description
TMV response-related protein
Coordinates
chr7:+:138172661..138173344
Molecular Weight (calculated)
23084.3 Da
IEP (calculated)
7.041
GRAVY (calculated)
0.106
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTAAESVHA LTAKVVDLDG SVAQFAPPVT AQEALAATAS GAQPSSSSRF LCCSDALDFD APISALAAHD ALHPGQLYFA LPASMLGRPL SAQGMAALAV
101: KACAALGTAP VGSVPSSSSS LDRSEARAAS SWPQRWQSTG RVAPLVVVRA DAHGEWKTYP VHGGYKAARV GGGGGGGDQT VGKTKNGVGY KGIARDLAPI
201: QRLSVIVEGA ELVSDPFIEQ YSVVLVN
101: KACAALGTAP VGSVPSSSSS LDRSEARAAS SWPQRWQSTG RVAPLVVVRA DAHGEWKTYP VHGGYKAARV GGGGGGGDQT VGKTKNGVGY KGIARDLAPI
201: QRLSVIVEGA ELVSDPFIEQ YSVVLVN
001: MGACASRESL RSDSAKLILL DGTLQEFSSP VKVWQILQKN PTSFVCNSDE MDFDDAVSAV AGNEELRSGQ LYFVLPLTWL NHPLRAEEMA ALAVKASSAL
101: TKSGGVGWVS GDDDVTTSEK TYQKKNIAGV KTNGGGGRGC GKGKRRFTAN LSTIAE
101: TKSGGVGWVS GDDDVTTSEK TYQKKNIAGV KTNGGGGRGC GKGKRRFTAN LSTIAE
Arabidopsis Description
Uncharacterized protein At5g66580 [Source:UniProtKB/TrEMBL;Acc:Q9FJY2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.