Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 1
- plasma membrane 1
- extracellular 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g109250.2.1 | Tomato | extracellular | 88.39 | 91.33 |
| VIT_03s0063g01950.t01 | Wine grape | plastid | 45.81 | 36.04 |
| KRH24527 | Soybean | cytosol | 30.97 | 33.57 |
| KRH29531 | Soybean | cytosol | 29.68 | 31.94 |
| PGSC0003DMT400007187 | Potato | cytosol | 30.97 | 31.58 |
| KRH28563 | Soybean | plastid | 29.68 | 31.29 |
| PGSC0003DMT400059007 | Potato | cytosol, nucleus, plastid | 28.39 | 30.34 |
| PGSC0003DMT400026013 | Potato | cytosol, nucleus, plastid | 31.61 | 30.25 |
| KRH76905 | Soybean | plastid | 28.39 | 30.14 |
| HORVU5Hr1G074010.1 | Barley | plastid | 29.03 | 24.46 |
| TraesCS5D01G278000.1 | Wheat | plastid | 29.03 | 23.32 |
| TraesCS5B01G270300.1 | Wheat | plastid | 29.03 | 23.2 |
| PGSC0003DMT400025724 | Potato | cytosol, plastid | 29.03 | 22.96 |
| TraesCS5A01G269900.1 | Wheat | plastid | 28.39 | 22.8 |
| TraesCS5A01G270100.1 | Wheat | plastid | 29.68 | 20.81 |
| Os09t0492900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 24.52 | 20.77 |
| TraesCS5B01G270600.1 | Wheat | plastid | 29.03 | 20.36 |
| TraesCS5D01G278200.1 | Wheat | plastid | 29.03 | 20.36 |
| HORVU5Hr1G074030.1 | Barley | cytosol, mitochondrion | 29.68 | 19.66 |
| TraesCS5A01G270000.1 | Wheat | plastid | 27.1 | 19.35 |
| TraesCS5D01G278100.1 | Wheat | plastid | 27.1 | 19.35 |
| OQU89709 | Sorghum | plastid | 27.74 | 18.86 |
| HORVU5Hr1G074020.1 | Barley | nucleus | 29.03 | 18.67 |
| EER96983 | Sorghum | cytosol | 27.74 | 18.53 |
| TraesCS5B01G270500.1 | Wheat | plastid | 25.81 | 18.52 |
| Zm00001d020967_P001 | Maize | plastid | 27.74 | 18.38 |
| Zm00001d020968_P001 | Maize | plastid | 25.81 | 17.62 |
| Os09t0493000-01 | Rice | plastid | 1.94 | 1.49 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400064780 | EnsemblPlantsGene:PGSC0003DMG400025163 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF21 | PFAM:PF14009 |
| PGSC:PGSC0003DMG400025163 | UniParc:UPI0002952CB5 | UniProt:M1CCW7 | MapMan:35.2 | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400025163]
Coordinates
chr1:+:85542156..85543175
Molecular Weight (calculated)
17205.3 Da
IEP (calculated)
8.207
GRAVY (calculated)
0.041
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MGICTSSPLM TKQNGSIMNL PVTKVAMVIQ MNGKLQEFRQ PITAGEILIQ NPDNFLCSSE AMNVNSLVPQ LAKDEILQLG QLYFFLPVSK LQTPLSLQDM
101: CVLAVKASTA LNDYCNIVTG SSGILTRKFK KMHNCHTKDL NLRPEVFESP LPLQY
101: CVLAVKASTA LNDYCNIVTG SSGILTRKFK KMHNCHTKDL NLRPEVFESP LPLQY
001: MGICSSSEST QVATAKLILQ DGRMMEFANP VKVGYVLLKY PMCFICNSDD MDFDDAVAAI SADEELQLGQ IYFALPLCWL RQPLKAEEMA ALAVKASSAL
101: MRGGGGGCRR KCVEPIVSDK LRMRVGSGDD TVGSGSGRRK VRNGDGGGSV SSSRRRKCYA AELSTIDE
101: MRGGGGGCRR KCVEPIVSDK LRMRVGSGDD TVGSGSGRRK VRNGDGGGSV SSSRRRKCYA AELSTIDE
Arabidopsis Description
HTH-type transcriptional regulator [Source:UniProtKB/TrEMBL;Acc:Q8LE56]
SUBAcon: [cytosol,nucleus,plastid]
SUBAcon: [cytosol,nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.