Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G278200.1 | Wheat | plastid | 91.4 | 91.4 |
| TraesCS5B01G270600.1 | Wheat | plastid | 89.59 | 89.59 |
| HORVU5Hr1G074030.1 | Barley | cytosol, mitochondrion | 83.26 | 78.63 |
| TraesCS5A01G270000.1 | Wheat | plastid | 66.52 | 67.74 |
| TraesCS5A01G269900.1 | Wheat | plastid | 55.66 | 63.73 |
| OQU89709 | Sorghum | plastid | 49.77 | 48.25 |
| Zm00001d020967_P001 | Maize | plastid | 47.96 | 45.3 |
| Os09t0492900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 34.84 | 42.08 |
| TraesCS5A01G379900.1 | Wheat | plastid | 28.51 | 37.72 |
| TraesCS6A01G168500.1 | Wheat | mitochondrion | 30.32 | 36.02 |
| TraesCS7A01G394600.1 | Wheat | plastid | 31.22 | 35.2 |
| TraesCS5A01G404200.1 | Wheat | cytosol | 27.6 | 34.66 |
| TraesCS5A01G404100.1 | Wheat | cytosol | 27.6 | 34.66 |
| TraesCS7A01G394700.1 | Wheat | mitochondrion, plastid | 31.22 | 34.5 |
| TraesCS6A01G168600.1 | Wheat | plastid | 30.32 | 33.84 |
| TraesCS5A01G404000.1 | Wheat | cytosol | 26.24 | 32.4 |
| TraesCS1A01G436300.1 | Wheat | mitochondrion | 26.24 | 30.53 |
| TraesCS2A01G266100.1 | Wheat | cytosol | 22.62 | 30.3 |
| TraesCS1A01G436400.1 | Wheat | plastid | 25.79 | 30.16 |
| PGSC0003DMT400064780 | Potato | extracellular | 20.81 | 29.68 |
| Solyc01g109250.2.1 | Tomato | extracellular | 19.91 | 29.33 |
| TraesCS2A01G266000.1 | Wheat | plastid | 24.89 | 28.65 |
| TraesCS5A01G403900.1 | Wheat | plastid | 27.15 | 25.75 |
| KRH24527 | Soybean | cytosol | 16.29 | 25.17 |
| KRH29531 | Soybean | cytosol | 16.29 | 25.0 |
| KRH76905 | Soybean | plastid | 16.29 | 24.66 |
| KRH28563 | Soybean | plastid | 15.84 | 23.81 |
| VIT_03s0063g01950.t01 | Wine grape | plastid | 19.46 | 21.83 |
| Os09t0493000-01 | Rice | plastid | 11.76 | 12.94 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G270100.1 | EnsemblPlantsGene:TraesCS5A01G270100 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF15 | PFAM:PF14009 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:480507905..480508712
Molecular Weight (calculated)
22965.2 Da
IEP (calculated)
10.782
GRAVY (calculated)
-0.260
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSCASRLPA SAAAAGSGRA VATKTAKVIR LDGSMAQYAA PVTAREALVD AAGASSFLCS SDELRFDAPA RALAADEALQ PGWLYFVLPL SMLRRPLSGQ
101: EMTALAVRAS SALAVASGIS SPTRGKNGAA VAGANAKRRK VAARVAPLAD DDDVAERDGG WDQHLAYDKY GGVRKRVLAA GDETAGKARK GNGYGGRRSS
201: RHRRRRAGAH RLSAILEADD F
101: EMTALAVRAS SALAVASGIS SPTRGKNGAA VAGANAKRRK VAARVAPLAD DDDVAERDGG WDQHLAYDKY GGVRKRVLAA GDETAGKARK GNGYGGRRSS
201: RHRRRRAGAH RLSAILEADD F
001: MGACASRESL RSDSAKLILL DGTLQEFSSP VKVWQILQKN PTSFVCNSDE MDFDDAVSAV AGNEELRSGQ LYFVLPLTWL NHPLRAEEMA ALAVKASSAL
101: TKSGGVGWVS GDDDVTTSEK TYQKKNIAGV KTNGGGGRGC GKGKRRFTAN LSTIAE
101: TKSGGVGWVS GDDDVTTSEK TYQKKNIAGV KTNGGGGRGC GKGKRRFTAN LSTIAE
Arabidopsis Description
Uncharacterized protein At5g66580 [Source:UniProtKB/TrEMBL;Acc:Q9FJY2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.