Subcellular Localization
min:
: max
Winner_takes_all: cytosol, mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G270100.1 | Wheat | plastid | 78.63 | 83.26 |
| TraesCS5B01G270600.1 | Wheat | plastid | 77.78 | 82.35 |
| TraesCS5D01G278200.1 | Wheat | plastid | 76.92 | 81.45 |
| HORVU5Hr1G074010.1 | Barley | plastid | 53.42 | 67.93 |
| HORVU5Hr1G074020.1 | Barley | nucleus | 61.54 | 59.75 |
| OQU89709 | Sorghum | plastid | 47.01 | 48.25 |
| Zm00001d020967_P001 | Maize | plastid | 45.3 | 45.3 |
| Os09t0492900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 31.62 | 40.44 |
| HORVU5Hr1G098280.1 | Barley | cytosol | 24.79 | 32.95 |
| HORVU5Hr1G098290.1 | Barley | cytosol | 24.79 | 32.95 |
| HORVU5Hr1G093900.1 | Barley | plastid | 24.36 | 32.57 |
| HORVU6Hr1G034380.1 | Barley | plastid | 26.5 | 32.46 |
| HORVU1Hr1G094330.1 | Barley | cytosol | 24.36 | 30.48 |
| Solyc01g109250.2.1 | Tomato | extracellular | 19.23 | 30.0 |
| HORVU6Hr1G034360.1 | Barley | mitochondrion, plastid | 22.22 | 29.71 |
| PGSC0003DMT400064780 | Potato | extracellular | 19.66 | 29.68 |
| HORVU7Hr1G093050.1 | Barley | mitochondrion, plastid | 26.07 | 28.77 |
| HORVU5Hr1G098260.1 | Barley | cytosol, mitochondrion | 26.07 | 28.5 |
| HORVU7Hr1G093080.1 | Barley | plastid | 25.64 | 28.44 |
| HORVU2Hr1G061800.1 | Barley | plastid | 23.08 | 28.42 |
| KRH24527 | Soybean | cytosol | 15.38 | 25.17 |
| KRH29531 | Soybean | cytosol | 15.38 | 25.0 |
| HORVU6Hr1G034350.1 | Barley | cytosol | 21.37 | 23.81 |
| KRH76905 | Soybean | plastid | 14.53 | 23.29 |
| KRH28563 | Soybean | plastid | 14.1 | 22.45 |
| VIT_03s0063g01950.t01 | Wine grape | plastid | 17.52 | 20.81 |
| HORVU2Hr1G061850.1 | Barley | extracellular, plastid | 14.1 | 16.67 |
| Os09t0493000-01 | Rice | plastid | 12.39 | 14.43 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G074030.1 | EnsemblPlantsGene:HORVU5Hr1G074030 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF15 | PFAM:PF14009 |
| SEG:seg | UniParc:UPI000B46C800 | UniProt:A0A287RSY9 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr5H:+:541860583..541861614
Molecular Weight (calculated)
24903.6 Da
IEP (calculated)
10.996
GRAVY (calculated)
-0.434
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: QPIHFALAHR GTRIPYQHVV TGEEMGSCAS RSPAAGYGRA AATKTAKVIG LDGSMAQYAA PVTAREALLD AARASSFLCS SDELRLDAPA RALAADEALQ
101: PGWLYFVLPV SMLRRPLSGQ EMTALAVRAS SALAVASGIA SPTRGKNGKR RKVAARVAPL ADDEDVAERG GGWGQRRAYG KYGGMRKSVQ AAGDETVRKA
201: REGDGYGGRR NGRHRRRRRA GAQRLSAILE ADDF
101: PGWLYFVLPV SMLRRPLSGQ EMTALAVRAS SALAVASGIA SPTRGKNGKR RKVAARVAPL ADDEDVAERG GGWGQRRAYG KYGGMRKSVQ AAGDETVRKA
201: REGDGYGGRR NGRHRRRRRA GAQRLSAILE ADDF
001: MGACASRESL RSDSAKLILL DGTLQEFSSP VKVWQILQKN PTSFVCNSDE MDFDDAVSAV AGNEELRSGQ LYFVLPLTWL NHPLRAEEMA ALAVKASSAL
101: TKSGGVGWVS GDDDVTTSEK TYQKKNIAGV KTNGGGGRGC GKGKRRFTAN LSTIAE
101: TKSGGVGWVS GDDDVTTSEK TYQKKNIAGV KTNGGGGRGC GKGKRRFTAN LSTIAE
Arabidopsis Description
Uncharacterized protein At5g66580 [Source:UniProtKB/TrEMBL;Acc:Q9FJY2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.