Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d020967_P001 | Maize | plastid | 72.81 | 70.94 |
| HORVU5Hr1G074010.1 | Barley | plastid | 47.37 | 58.7 |
| TraesCS5A01G269900.1 | Wheat | plastid | 47.81 | 56.48 |
| TraesCS5B01G270300.1 | Wheat | plastid | 47.81 | 56.19 |
| TraesCS5D01G278000.1 | Wheat | plastid | 47.37 | 55.96 |
| TraesCS5D01G278100.1 | Wheat | plastid | 47.81 | 50.23 |
| TraesCS5A01G270100.1 | Wheat | plastid | 48.25 | 49.77 |
| TraesCS5B01G270500.1 | Wheat | plastid | 46.93 | 49.54 |
| TraesCS5A01G270000.1 | Wheat | plastid | 46.93 | 49.31 |
| TraesCS5D01G278200.1 | Wheat | plastid | 46.49 | 47.96 |
| TraesCS5B01G270600.1 | Wheat | plastid | 46.05 | 47.51 |
| HORVU5Hr1G074030.1 | Barley | cytosol, mitochondrion | 48.25 | 47.01 |
| EER96983 | Sorghum | cytosol | 46.05 | 45.26 |
| HORVU5Hr1G074020.1 | Barley | nucleus | 46.93 | 44.4 |
| Os09t0492900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 32.02 | 39.89 |
| KXG37596 | Sorghum | cytosol, nucleus, plastid | 28.95 | 39.52 |
| EER93387 | Sorghum | cytosol | 29.39 | 35.64 |
| EES06442 | Sorghum | plastid | 31.58 | 35.29 |
| EER88673 | Sorghum | plastid | 34.21 | 33.91 |
| OQU84553 | Sorghum | plastid | 28.07 | 31.53 |
| EER95817 | Sorghum | nucleus | 25.88 | 30.41 |
| KRH24527 | Soybean | cytosol | 18.86 | 30.07 |
| Solyc01g109250.2.1 | Tomato | extracellular | 19.3 | 29.33 |
| KRH29531 | Soybean | cytosol | 17.98 | 28.47 |
| PGSC0003DMT400064780 | Potato | extracellular | 18.86 | 27.74 |
| KRH76905 | Soybean | plastid | 16.23 | 25.34 |
| KRH28563 | Soybean | plastid | 15.35 | 23.81 |
| VIT_03s0063g01950.t01 | Wine grape | plastid | 17.11 | 19.8 |
| Os09t0493000-01 | Rice | plastid | 10.09 | 11.44 |
Protein Annotations
| EnsemblPlants:OQU89709 | EnsemblPlantsGene:SORBI_3002G250900 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF15 | PFAM:PF14009 |
| ProteinID:OQU89709 | ProteinID:OQU89709.1 | RefSeq:XP_002460461.1 | SEG:seg | UniParc:UPI0001A837B2 | UniProt:A0A1W0W5M5 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:63803062..63803858
Molecular Weight (calculated)
23297.5 Da
IEP (calculated)
11.340
GRAVY (calculated)
-0.428
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MGACVSFSRS PPASSAPEPE ASQSQRTAAT VKVVNLDGSM AQLAAGPVTA REALAAPAPA PGDDGGRHRA SSSPPPPPRV FLCSADELGF DAPPRALAAG
101: EALQPGQLYF VLPASALRRP LSANDMAALA VRAATALAAA GGLSPRRDKQ GGATQASKRR RRSTARVAPL LVAVSSKEGT PDGDGARKND DGERTVGKTR
201: KRAAGYRTGG SRRRAVVQRL SAIAEDGE
101: EALQPGQLYF VLPASALRRP LSANDMAALA VRAATALAAA GGLSPRRDKQ GGATQASKRR RRSTARVAPL LVAVSSKEGT PDGDGARKND DGERTVGKTR
201: KRAAGYRTGG SRRRAVVQRL SAIAEDGE
001: MGICVSFRRE DSNSSPTVKI VTVNGDLREY NVPVIASQVL EAESAAAYSS SSSSRPSSYF ICDSDSLYYD DFIPAIKSEE PLQADQIYFV LPISKRQSRL
101: TASDMAALAV KASVAIQNSV KKESRRRKKV RISPVMMLTG SNDSVNGNGS ETTVKKGRPF VSKTAPVKAS SGINRSGSVR NLRRYTSKRA KLAVRSFRLK
201: LSTIYEGSVV
101: TASDMAALAV KASVAIQNSV KKESRRRKKV RISPVMMLTG SNDSVNGNGS ETTVKKGRPF VSKTAPVKAS SGINRSGSVR NLRRYTSKRA KLAVRSFRLK
201: LSTIYEGSVV
Arabidopsis Description
At1g21010 [Source:UniProtKB/TrEMBL;Acc:Q7XJ58]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.