Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G269900.1 | Wheat | plastid | 95.36 | 95.85 |
| TraesCS5D01G278000.1 | Wheat | plastid | 91.24 | 91.71 |
| HORVU5Hr1G074010.1 | Barley | plastid | 80.93 | 85.33 |
| TraesCS5B01G270600.1 | Wheat | plastid | 63.4 | 55.66 |
| TraesCS5B01G270500.1 | Wheat | plastid | 61.86 | 55.56 |
| OQU89709 | Sorghum | plastid | 56.19 | 47.81 |
| Zm00001d020967_P001 | Maize | plastid | 54.64 | 45.3 |
| Os09t0492900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 37.11 | 39.34 |
| TraesCS5B01G383500.1 | Wheat | plastid | 30.93 | 34.88 |
| TraesCS5B01G408800.1 | Wheat | cytosol | 30.93 | 34.09 |
| TraesCS5B01G409000.1 | Wheat | cytosol | 29.38 | 33.33 |
| TraesCS6B01G196500.1 | Wheat | plastid | 32.47 | 33.16 |
| TraesCS5B01G408700.1 | Wheat | cytosol | 30.93 | 32.61 |
| TraesCS7B01G296700.1 | Wheat | plastid | 30.93 | 31.25 |
| TraesCS6B01G196600.1 | Wheat | plastid | 31.44 | 31.12 |
| Solyc01g109250.2.1 | Tomato | extracellular | 22.68 | 29.33 |
| TraesCS7B01G296600.1 | Wheat | plastid | 29.38 | 29.23 |
| PGSC0003DMT400064780 | Potato | extracellular | 23.2 | 29.03 |
| TraesCS1B01G471500.1 | Wheat | mitochondrion | 26.8 | 28.11 |
| KRH24527 | Soybean | cytosol | 20.62 | 27.97 |
| KRH29531 | Soybean | cytosol | 20.62 | 27.78 |
| TraesCS2B01G276000.1 | Wheat | cytosol, nucleus, plastid | 26.8 | 27.66 |
| TraesCS2B01G276100.1 | Wheat | cytosol, extracellular, plastid | 25.77 | 26.6 |
| VIT_03s0063g01950.t01 | Wine grape | plastid | 24.23 | 23.86 |
| KRH28563 | Soybean | plastid | 17.53 | 23.13 |
| KRH76905 | Soybean | plastid | 17.01 | 22.6 |
| Os09t0493000-01 | Rice | plastid | 12.89 | 12.44 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G270300.1 | EnsemblPlantsGene:TraesCS5B01G270300 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF15 | PFAM:PF14009 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr5B:+:455760765..455761529
Molecular Weight (calculated)
19668.2 Da
IEP (calculated)
9.199
GRAVY (calculated)
-0.122
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSCVSRSTA SVEGSGRAVA TAKVVGPDGS LAQFAAPVMA GEALGDAARA SSFLCSADEL RFDAPARALA AEEALQPGWL YFALPMSMLR RPLSGQEMAA
101: LAVKASSALA VASGKGRKAA RVAPLVLADD EGTGTEDGGW SRHAYGKSDA LKTVHGGGET VGKTRKRAAG GSYGSRTSRP AGVQRLSSIL EADD
101: LAVKASSALA VASGKGRKAA RVAPLVLADD EGTGTEDGGW SRHAYGKSDA LKTVHGGGET VGKTRKRAAG GSYGSRTSRP AGVQRLSSIL EADD
001: MGACASRESR RTETAKLILP DGTLQEFSTP VKVWQILQKN PTSFVCNSDD MDFDDAVLAV PGSEDLRPGE LYFVLPLTWL NHPLRADEMA ALAVKASSAL
101: AKSGGGGLSY NDEDVGECRV RRVKRNGCGG RGCGGGGKGR RKFTAELSSI AE
101: AKSGGGGLSY NDEDVGECRV RRVKRNGCGG RGCGGGGKGR RKFTAELSSI AE
Arabidopsis Description
Uncharacterized protein At3g50800 [Source:UniProtKB/TrEMBL;Acc:Q9SVL8]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.