Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- plastid 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G270300.1 | Wheat | plastid | 91.71 | 91.24 |
| TraesCS5A01G269900.1 | Wheat | plastid | 90.16 | 90.16 |
| HORVU5Hr1G074010.1 | Barley | plastid | 80.83 | 84.78 |
| TraesCS5D01G278100.1 | Wheat | plastid | 60.62 | 53.92 |
| TraesCS5D01G278200.1 | Wheat | plastid | 61.14 | 53.39 |
| OQU89709 | Sorghum | plastid | 55.96 | 47.37 |
| Zm00001d020967_P001 | Maize | plastid | 55.96 | 46.15 |
| TraesCS6D01G158200.1 | Wheat | plastid | 22.8 | 41.12 |
| Os09t0492900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 36.79 | 38.8 |
| TraesCS5D01G389400.1 | Wheat | plastid | 31.09 | 35.5 |
| TraesCS5D01G414200.1 | Wheat | cytosol | 32.12 | 35.23 |
| TraesCS5D01G414300.1 | Wheat | cytosol | 31.09 | 34.09 |
| TraesCS5D01G414000.1 | Wheat | cytosol | 31.61 | 34.08 |
| TraesCS5D01G414100.1 | Wheat | cytosol | 31.09 | 33.52 |
| TraesCS6D01G158000.1 | Wheat | plastid | 31.61 | 31.94 |
| TraesCS6D01G157600.1 | Wheat | plastid | 31.09 | 31.58 |
| TraesCS6D01G157700.1 | Wheat | plastid | 31.61 | 31.12 |
| TraesCS6D01G158100.1 | Wheat | plastid | 28.5 | 29.73 |
| TraesCS7D01G390200.1 | Wheat | mitochondrion, plastid | 30.05 | 29.59 |
| TraesCS1D01G444800.1 | Wheat | cytosol, plastid | 28.5 | 29.57 |
| Solyc01g109250.2.1 | Tomato | extracellular | 22.8 | 29.33 |
| TraesCS7D01G390000.1 | Wheat | plastid | 29.53 | 29.08 |
| PGSC0003DMT400064780 | Potato | extracellular | 23.32 | 29.03 |
| TraesCS1D01G444700.1 | Wheat | cytosol, extracellular, peroxisome, plastid | 27.46 | 28.49 |
| KRH24527 | Soybean | cytosol | 20.73 | 27.97 |
| KRH29531 | Soybean | cytosol | 20.73 | 27.78 |
| TraesCS2D01G257700.1 | Wheat | mitochondrion, nucleus, plastid | 26.94 | 27.66 |
| TraesCS2D01G257800.1 | Wheat | plastid | 26.42 | 26.56 |
| TraesCS7D01G390100.1 | Wheat | plastid | 31.09 | 25.1 |
| VIT_03s0063g01950.t01 | Wine grape | plastid | 23.83 | 23.35 |
| KRH76905 | Soybean | plastid | 16.58 | 21.92 |
| KRH28563 | Soybean | plastid | 16.58 | 21.77 |
| Os09t0493000-01 | Rice | plastid | 12.44 | 11.94 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G278000.1 | EnsemblPlantsGene:TraesCS5D01G278000 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF15 | PFAM:PF14009 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr5D:+:379965258..379966027
Molecular Weight (calculated)
19532.0 Da
IEP (calculated)
8.228
GRAVY (calculated)
-0.134
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSCVSRSTA SPLEGSGRAV ATAKVVGQDG SLAQFAAPVT AGEALGDAAR APSFMCSADE LRFDAPARAL AAEEALQPGW LYFALPMSML RRPLSGQEMA
101: ALAVKASSAL AVADGKGRKA ARVAPLVVAE ESAGTEDGGW SHHAYGKGDA LKTVHGGGET VGKTRKRAGG SYGSGTSRPA SVQRLSSILE ADD
101: ALAVKASSAL AVADGKGRKA ARVAPLVVAE ESAGTEDGGW SHHAYGKGDA LKTVHGGGET VGKTRKRAGG SYGSGTSRPA SVQRLSSILE ADD
001: MGICSSSEST QVATAKLILQ DGRMMEFANP VKVGYVLLKY PMCFICNSDD MDFDDAVAAI SADEELQLGQ IYFALPLCWL RQPLKAEEMA ALAVKASSAL
101: MRGGGGGCRR KCVEPIVSDK LRMRVGSGDD TVGSGSGRRK VRNGDGGGSV SSSRRRKCYA AELSTIDE
101: MRGGGGGCRR KCVEPIVSDK LRMRVGSGDD TVGSGSGRRK VRNGDGGGSV SSSRRRKCYA AELSTIDE
Arabidopsis Description
HTH-type transcriptional regulator [Source:UniProtKB/TrEMBL;Acc:Q8LE56]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.