Factsheet for TraesCS7D01G390200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G390000.1	Wheat	plastid	92.35	92.35
TraesCS7B01G296700.1	Wheat	plastid	87.76	89.58
TraesCS7D01G390100.1	Wheat	plastid	87.24	71.55
TraesCS6D01G158200.1	Wheat	plastid	31.63	57.94
Zm00001d046687_P001	Maize	plastid	61.73	57.89
TraesCS6D01G158000.1	Wheat	plastid	52.55	53.93
TraesCS6D01G158100.1	Wheat	plastid	49.49	52.43
EER88673	Sorghum	plastid	60.71	51.74
Zm00001d036787_P001	Maize	plastid	57.14	51.61
TraesCS6D01G157600.1	Wheat	plastid	50.0	51.58
TraesCS6D01G157700.1	Wheat	plastid	51.53	51.53
GSMUA_Achr9P12270_001	Banana	cytosol	32.65	34.78
TraesCS2D01G257700.1	Wheat	mitochondrion, nucleus, plastid	30.61	31.91
TraesCS5D01G414300.1	Wheat	cytosol	28.57	31.82
TraesCS5D01G389400.1	Wheat	plastid	27.04	31.36
TraesCS5D01G414200.1	Wheat	cytosol	28.06	31.25
TraesCS2D01G257800.1	Wheat	plastid	30.1	30.73
TraesCS1D01G444800.1	Wheat	cytosol, plastid	28.57	30.11
TraesCS5D01G278000.1	Wheat	plastid	29.59	30.05
TraesCS5D01G414100.1	Wheat	cytosol	27.04	29.61
TraesCS1D01G444700.1	Wheat	cytosol, extracellular, peroxisome, plastid	27.55	29.03
VIT_18s0122g00300.t01	Wine grape	plastid	28.06	28.8
TraesCS5D01G414000.1	Wheat	cytosol	26.02	28.49
PGSC0003DMT400025724	Potato	cytosol, plastid	28.06	28.06
TraesCS5D01G278200.1	Wheat	plastid	31.63	28.05
CDX85960	Canola	cytosol	29.59	27.88
Solyc04g082960.1.1	Tomato	cytosol	26.53	27.81
Bra003714.1-P	Field mustard	cytosol	29.59	27.62
CDX68092	Canola	cytosol, plastid	29.59	27.62
TraesCS5D01G278100.1	Wheat	plastid	30.1	27.19
AT1G76600.1	Thale cress	nucleus	29.59	26.85
CDY45978	Canola	nucleus	28.06	25.94
Bra008267.1-P	Field mustard	nucleus	28.06	25.94
CDY20399	Canola	nucleus, plastid	28.06	25.82
AT1G21010.1	Thale cress	cytosol	27.55	25.71
CDY33663	Canola	cytosol	26.53	25.12
CDY06423	Canola	cytosol	20.41	24.84
Bra025866.1-P	Field mustard	cytosol	26.53	24.53
CDX96609	Canola	cytosol	26.02	24.29
Bra016439.1-P	Field mustard	cytosol	26.02	24.29
CDY01339	Canola	nucleus	25.0	23.67
CDY00357	Canola	nucleus	23.98	22.71
Bra012264.1-P	Field mustard	cytosol	23.98	22.71
CDY04592	Canola	plastid	26.53	21.58
CDY29485	Canola	plastid	26.53	21.49

Protein Annotations

EnsemblPlants:TraesCS7D01G390200.1	EnsemblPlantsGene:TraesCS7D01G390200	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF11	PFAM:PF14009
SEG:seg	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:505589148..505589738

Molecular Weight (calculated)

20193.9 Da

IEP (calculated)

9.562

GRAVY (calculated)

-0.162

Length

196 amino acids

Sequence
(BLAST)

001: MGSGLSRNHR SSVAPQQQPS SARVIAADGS LTEFATSSPV SVSDVLAAGN AGGSFFLCNS DALYFDEDVP ALGGGELLRP GQIYFVLPAA MLGRPLSSAD
101: MAAMAVQASE ALAARARPRG RGAGIRKVRV TPVHAEGGRG DVDAQVNAKL NERTLGEYSV KASGNQAKIG KKAAVTAFPP AKKALKQLST IEEDAE

Best Arabidopsis Sequence Match ( AT3G50800.1 )
(BLAST)

001: MGACASRESR RTETAKLILP DGTLQEFSTP VKVWQILQKN PTSFVCNSDD MDFDDAVLAV PGSEDLRPGE LYFVLPLTWL NHPLRADEMA ALAVKASSAL
101: AKSGGGGLSY NDEDVGECRV RRVKRNGCGG RGCGGGGKGR RKFTAELSSI AE

Arabidopsis Description

Uncharacterized protein At3g50800 [Source:UniProtKB/TrEMBL;Acc:Q9SVL8]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.