Factsheet for TraesCS5D01G278200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G270600.1	Wheat	plastid	91.4	91.4
TraesCS5A01G270100.1	Wheat	plastid	91.4	91.4
HORVU5Hr1G074030.1	Barley	cytosol, mitochondrion	81.45	76.92
TraesCS5D01G278100.1	Wheat	plastid	65.16	66.36
TraesCS5D01G278000.1	Wheat	plastid	53.39	61.14
OQU89709	Sorghum	plastid	47.96	46.49
Zm00001d020967_P001	Maize	plastid	47.96	45.3
TraesCS6D01G158200.1	Wheat	plastid	19.91	41.12
Os09t0492900-00	Rice	cytosol, mitochondrion, nucleus, plastid	33.48	40.44
TraesCS5D01G389400.1	Wheat	plastid	28.96	37.87
TraesCS6D01G157600.1	Wheat	plastid	29.86	34.74
TraesCS6D01G158000.1	Wheat	plastid	29.86	34.55
TraesCS6D01G157700.1	Wheat	plastid	30.32	34.18
TraesCS6D01G158100.1	Wheat	plastid	28.05	33.51
TraesCS5D01G414200.1	Wheat	cytosol	26.24	32.95
TraesCS7D01G390000.1	Wheat	plastid	28.51	32.14
TraesCS5D01G414000.1	Wheat	cytosol	25.79	31.84
TraesCS5D01G414300.1	Wheat	cytosol	25.34	31.82
TraesCS7D01G390200.1	Wheat	mitochondrion, plastid	28.05	31.63
TraesCS1D01G444700.1	Wheat	cytosol, extracellular, peroxisome, plastid	26.24	31.18
TraesCS1D01G444800.1	Wheat	cytosol, plastid	26.24	31.18
TraesCS5D01G414100.1	Wheat	cytosol	24.43	30.17
PGSC0003DMT400064780	Potato	extracellular	20.36	29.03
TraesCS2D01G257700.1	Wheat	mitochondrion, nucleus, plastid	24.43	28.72
Solyc01g109250.2.1	Tomato	extracellular	19.46	28.67
TraesCS2D01G257800.1	Wheat	plastid	23.08	26.56
TraesCS7D01G390100.1	Wheat	plastid	28.51	26.36
KRH29531	Soybean	cytosol	16.29	25.0
KRH24527	Soybean	cytosol	15.84	24.48
KRH76905	Soybean	plastid	15.84	23.97
KRH28563	Soybean	plastid	15.38	23.13
VIT_03s0063g01950.t01	Wine grape	plastid	19.0	21.32
Os09t0493000-01	Rice	plastid	10.86	11.94

Protein Annotations

EnsemblPlants:TraesCS5D01G278200.1	EnsemblPlantsGene:TraesCS5D01G278200	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF15	PFAM:PF14009
SEG:seg	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:380031701..380032366

Molecular Weight (calculated)

22992.4 Da

IEP (calculated)

11.240

GRAVY (calculated)

-0.228

Length

221 amino acids

Sequence
(BLAST)

001: MGSCASRSPA PAAAAGSWRA VGSKTAKVIR LDGSMAQYAA LVTAREALVG AARASSFLCS SDELRLDAPA RALAADELLQ PGWLYFVLPL SMLRRPLSGQ
101: EMTALAVRAS SALAVASGIS SPTRGKNGAA LAGANGKRRK VAARVAPLAD DDDVAERDGG WDQHLAHGKY GGVRKRVLAA GDVAAGKARR GDGYGGRRSS
201: RHRRRRAGAE RLSAILEADD F

Best Arabidopsis Sequence Match ( AT5G66580.1 )
(BLAST)

001: MGACASRESL RSDSAKLILL DGTLQEFSSP VKVWQILQKN PTSFVCNSDE MDFDDAVSAV AGNEELRSGQ LYFVLPLTWL NHPLRAEEMA ALAVKASSAL
101: TKSGGVGWVS GDDDVTTSEK TYQKKNIAGV KTNGGGGRGC GKGKRRFTAN LSTIAE

Arabidopsis Description

Uncharacterized protein At5g66580 [Source:UniProtKB/TrEMBL;Acc:Q9FJY2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.