Factsheet for TraesCS5D01G278100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G270500.1	Wheat	plastid	90.78	91.2
TraesCS5A01G270000.1	Wheat	plastid	90.78	90.78
HORVU5Hr1G074020.1	Barley	nucleus	86.64	78.01
TraesCS5D01G278200.1	Wheat	plastid	66.36	65.16
TraesCS5D01G278000.1	Wheat	plastid	53.92	60.62
OQU89709	Sorghum	plastid	50.23	47.81
Zm00001d020967_P001	Maize	plastid	49.31	45.73
TraesCS6D01G158200.1	Wheat	plastid	20.28	41.12
TraesCS5D01G389400.1	Wheat	plastid	30.41	39.05
Os09t0492900-00	Rice	cytosol, mitochondrion, nucleus, plastid	32.72	38.8
TraesCS6D01G158000.1	Wheat	plastid	29.95	34.03
TraesCS6D01G157600.1	Wheat	plastid	29.49	33.68
TraesCS6D01G157700.1	Wheat	plastid	30.41	33.67
TraesCS5D01G414300.1	Wheat	cytosol	27.19	33.52
TraesCS5D01G414200.1	Wheat	cytosol	26.73	32.95
TraesCS5D01G414000.1	Wheat	cytosol	26.27	31.84
TraesCS1D01G444700.1	Wheat	cytosol, extracellular, peroxisome, plastid	27.19	31.72
TraesCS6D01G158100.1	Wheat	plastid	26.73	31.35
TraesCS5D01G414100.1	Wheat	cytosol	25.81	31.28
TraesCS1D01G444800.1	Wheat	cytosol, plastid	26.73	31.18
TraesCS7D01G390000.1	Wheat	plastid	27.65	30.61
TraesCS2D01G257700.1	Wheat	mitochondrion, nucleus, plastid	26.27	30.32
TraesCS7D01G390200.1	Wheat	mitochondrion, plastid	27.19	30.1
TraesCS2D01G257800.1	Wheat	plastid	24.88	28.12
PGSC0003DMT400064780	Potato	extracellular	19.35	27.1
Solyc01g109250.2.1	Tomato	extracellular	18.43	26.67
TraesCS7D01G390100.1	Wheat	plastid	28.11	25.52
KRH24527	Soybean	cytosol	16.59	25.17
KRH29531	Soybean	cytosol	16.59	25.0
KRH76905	Soybean	plastid	15.21	22.6
KRH28563	Soybean	plastid	15.21	22.45
VIT_03s0063g01950.t01	Wine grape	plastid	18.43	20.3
Os09t0493000-01	Rice	plastid	10.14	10.95

Protein Annotations

EnsemblPlants:TraesCS5D01G278100.1	EnsemblPlantsGene:TraesCS5D01G278100	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF15	PFAM:PF14009
SEG:seg	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:380013422..380014075

Molecular Weight (calculated)

22435.4 Da

IEP (calculated)

10.813

GRAVY (calculated)

-0.295

Length

217 amino acids

Sequence
(BLAST)

001: MGSCISRSPA SSAAAGSGRA VATKTAKVVD VDGSMAQFAA PVTAREALDS VQERRPGASV FLCSSDELRF DVPARALAGD EALQPGWLYF VLPMSTLRRS
101: LSGPEMAALA ARASSALAVA SGVASPPRRK NGVGAPGANS KRRKAAARVA PLVVADEIAG PDGGSDHHHT YGKYAGDEPA AKAWKRSSWG GSRSSTRRRR
201: RASGTPTLSS ILEADDF

Best Arabidopsis Sequence Match ( AT5G66580.1 )
(BLAST)

001: MGACASRESL RSDSAKLILL DGTLQEFSSP VKVWQILQKN PTSFVCNSDE MDFDDAVSAV AGNEELRSGQ LYFVLPLTWL NHPLRAEEMA ALAVKASSAL
101: TKSGGVGWVS GDDDVTTSEK TYQKKNIAGV KTNGGGGRGC GKGKRRFTAN LSTIAE

Arabidopsis Description

Uncharacterized protein At5g66580 [Source:UniProtKB/TrEMBL;Acc:Q9FJY2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.