Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G278100.1 | Wheat | plastid | 90.78 | 90.78 |
| TraesCS5B01G270500.1 | Wheat | plastid | 90.32 | 90.74 |
| HORVU5Hr1G074020.1 | Barley | nucleus | 83.87 | 75.52 |
| TraesCS5A01G270100.1 | Wheat | plastid | 67.74 | 66.52 |
| TraesCS5A01G269900.1 | Wheat | plastid | 53.46 | 60.1 |
| OQU89709 | Sorghum | plastid | 49.31 | 46.93 |
| Zm00001d020967_P001 | Maize | plastid | 48.85 | 45.3 |
| TraesCS5A01G379900.1 | Wheat | plastid | 29.03 | 37.72 |
| Os09t0492900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 31.8 | 37.7 |
| TraesCS5A01G404100.1 | Wheat | cytosol | 28.11 | 34.66 |
| TraesCS6A01G168500.1 | Wheat | mitochondrion | 29.49 | 34.41 |
| TraesCS5A01G404200.1 | Wheat | cytosol | 27.65 | 34.09 |
| TraesCS6A01G168600.1 | Wheat | plastid | 29.49 | 32.32 |
| TraesCS5A01G404000.1 | Wheat | cytosol | 25.81 | 31.28 |
| TraesCS7A01G394600.1 | Wheat | plastid | 28.11 | 31.12 |
| TraesCS2A01G266100.1 | Wheat | cytosol | 23.04 | 30.3 |
| TraesCS7A01G394700.1 | Wheat | mitochondrion, plastid | 27.65 | 30.0 |
| TraesCS1A01G436300.1 | Wheat | mitochondrion | 25.81 | 29.47 |
| TraesCS2A01G266000.1 | Wheat | plastid | 25.35 | 28.65 |
| TraesCS1A01G436400.1 | Wheat | plastid | 24.88 | 28.57 |
| PGSC0003DMT400064780 | Potato | extracellular | 19.35 | 27.1 |
| Solyc01g109250.2.1 | Tomato | extracellular | 18.43 | 26.67 |
| KRH24527 | Soybean | cytosol | 16.59 | 25.17 |
| KRH29531 | Soybean | cytosol | 16.59 | 25.0 |
| TraesCS5A01G403900.1 | Wheat | plastid | 26.73 | 24.89 |
| KRH76905 | Soybean | plastid | 14.75 | 21.92 |
| KRH28563 | Soybean | plastid | 14.75 | 21.77 |
| VIT_03s0063g01950.t01 | Wine grape | plastid | 17.97 | 19.8 |
| Os09t0493000-01 | Rice | plastid | 9.68 | 10.45 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G270000.1 | EnsemblPlantsGene:TraesCS5A01G270000 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF15 | PFAM:PF14009 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:480503178..480503831
Molecular Weight (calculated)
22554.5 Da
IEP (calculated)
10.602
GRAVY (calculated)
-0.271
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSCVSRSPA SSAVAGSGRS VATKTAKVVD VDGSMAQFTA PVTAREALDS VQERRPRASV FLCSSDELRF DVPARALAAD EALQPGWLYF VLPMSTLRRS
101: LSGPEMAALA ARASWALAFA SGVASPPQRK NGAGVPGAKG KRRKAAARVS PLVVADEIAG TDGGSDHHHV YGKYGGDEPA AKAWKRSSSG GSRSSTRHLR
201: RASGTPTLSS ILEADDF
101: LSGPEMAALA ARASWALAFA SGVASPPQRK NGAGVPGAKG KRRKAAARVS PLVVADEIAG TDGGSDHHHV YGKYGGDEPA AKAWKRSSSG GSRSSTRHLR
201: RASGTPTLSS ILEADDF
001: MGICSSYEST QVATAKLILH DGRMMEFTSP VKVGYVLQKN PMCFICNSDD MDFDNVVSAI SADEEFQLGQ LYFALPLSSL HHSLKAEEMA ALAVKASSAL
101: MRSGGSCGRD KCRCRRKCVS PVIFSARRVA AVGANGETRN GKRRGGGGSG RRKYAAKLSK IEE
101: MRSGGSCGRD KCRCRRKCVS PVIFSARRVA AVGANGETRN GKRRGGGGSG RRKYAAKLSK IEE
Arabidopsis Description
HTH-type transcriptional regulator [Source:UniProtKB/TrEMBL;Acc:Q680G2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.