Factsheet for TraesCS6D01G158200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G157700.1	Wheat	plastid	95.33	52.04
TraesCS6B01G196600.1	Wheat	plastid	91.59	50.0
TraesCS6A01G168600.1	Wheat	plastid	85.98	46.46
TraesCS6D01G158100.1	Wheat	plastid	75.7	43.78
TraesCS6D01G157600.1	Wheat	plastid	76.64	43.16
TraesCS6D01G158000.1	Wheat	plastid	73.83	41.36
Zm00001d015867_P001	Maize	plastid	68.22	34.11
Os02t0193200-01	Rice	mitochondrion	63.55	34.0
Os02t0193300-01	Rice	mitochondrion	60.75	33.85
TraesCS7D01G390200.1	Wheat	mitochondrion, plastid	57.94	31.63
OQU84553	Sorghum	plastid	59.81	31.53
TraesCS7D01G390000.1	Wheat	plastid	57.01	31.12
GSMUA_Achr9P12270_001	Banana	cytosol	43.93	25.54
TraesCS7D01G390100.1	Wheat	plastid	57.01	25.52
TraesCS5D01G414100.1	Wheat	cytosol	40.19	24.02
TraesCS5D01G414300.1	Wheat	cytosol	39.25	23.86
TraesCS5D01G414200.1	Wheat	cytosol	38.32	23.3
TraesCS5D01G414000.1	Wheat	cytosol	38.32	22.91
TraesCS5D01G278000.1	Wheat	plastid	41.12	22.8
VIT_18s0122g00300.t01	Wine grape	plastid	40.19	22.51
PGSC0003DMT400025724	Potato	cytosol, plastid	41.12	22.45
Solyc04g082960.1.1	Tomato	cytosol	38.32	21.93
TraesCS5D01G389400.1	Wheat	plastid	33.64	21.3
TraesCS5D01G278100.1	Wheat	plastid	41.12	20.28
TraesCS5D01G278200.1	Wheat	plastid	41.12	19.91
TraesCS2D01G257700.1	Wheat	mitochondrion, nucleus, plastid	34.58	19.68
AT1G21010.1	Thale cress	cytosol	38.32	19.52
TraesCS1D01G444700.1	Wheat	cytosol, extracellular, peroxisome, plastid	33.64	19.35
CDY33663	Canola	cytosol	37.38	19.32
TraesCS2D01G257800.1	Wheat	plastid	34.58	19.27
AT1G76600.1	Thale cress	nucleus	38.32	18.98
Bra025866.1-P	Field mustard	cytosol	37.38	18.87
Bra008267.1-P	Field mustard	nucleus	37.38	18.87
CDY45978	Canola	nucleus	37.38	18.87
CDY01339	Canola	nucleus	36.45	18.84
TraesCS1D01G444800.1	Wheat	cytosol, plastid	32.71	18.82
CDY20399	Canola	nucleus, plastid	37.38	18.78
CDX85960	Canola	cytosol	36.45	18.75
CDX96609	Canola	cytosol	36.45	18.57
CDX68092	Canola	cytosol, plastid	36.45	18.57
Bra016439.1-P	Field mustard	cytosol	36.45	18.57
Bra003714.1-P	Field mustard	cytosol	36.45	18.57
CDY00357	Canola	nucleus	34.58	17.87
Bra012264.1-P	Field mustard	cytosol	34.58	17.87
CDY04592	Canola	plastid	37.38	16.6
CDY29485	Canola	plastid	37.38	16.53
CDY06423	Canola	cytosol	24.3	16.15

Protein Annotations

EnsemblPlants:TraesCS6D01G158200.1	EnsemblPlantsGene:TraesCS6D01G158200	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF25	PFAM:PF14009
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:134688921..134689244

Molecular Weight (calculated)

11069.3 Da

IEP (calculated)

6.494

GRAVY (calculated)

0.365

Length

107 amino acids

Sequence
(BLAST)

001: MGAKLSCFSN HGGILSQQPH QPAPVRVIAA DGSLKELPAS PRVTVSNVLG GNAASFFVCS SDALYFDQSP PALASGEVLQ AGQIYFVLPA ALLWRPLSSA
101: EMASLAV

Best Arabidopsis Sequence Match ( AT5G66580.1 )
(BLAST)

001: MGACASRESL RSDSAKLILL DGTLQEFSSP VKVWQILQKN PTSFVCNSDE MDFDDAVSAV AGNEELRSGQ LYFVLPLTWL NHPLRAEEMA ALAVKASSAL
101: TKSGGVGWVS GDDDVTTSEK TYQKKNIAGV KTNGGGGRGC GKGKRRFTAN LSTIAE

Arabidopsis Description

Uncharacterized protein At5g66580 [Source:UniProtKB/TrEMBL;Acc:Q9FJY2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.