Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025866.1-P | Field mustard | cytosol | 87.6 | 100.0 |
| CDY04592 | Canola | plastid | 94.63 | 95.02 |
| AT1G21010.1 | Thale cress | cytosol | 73.97 | 85.24 |
| CDY00357 | Canola | nucleus | 72.73 | 85.02 |
| CDY01339 | Canola | nucleus | 71.9 | 84.06 |
| CDY33663 | Canola | cytosol | 70.66 | 82.61 |
| CDX96609 | Canola | cytosol | 70.66 | 81.43 |
| CDY20399 | Canola | nucleus, plastid | 62.4 | 70.89 |
| CDY45978 | Canola | nucleus | 61.57 | 70.28 |
| CDX85960 | Canola | cytosol | 56.2 | 65.38 |
| CDX68092 | Canola | cytosol, plastid | 56.2 | 64.76 |
| CDY06423 | Canola | cytosol | 35.54 | 53.42 |
| VIT_18s0122g00300.t01 | Wine grape | plastid | 40.5 | 51.31 |
| Solyc04g082960.1.1 | Tomato | cytosol | 34.71 | 44.92 |
| PGSC0003DMT400025724 | Potato | cytosol, plastid | 36.36 | 44.9 |
| TraesCS6D01G158200.1 | Wheat | plastid | 16.53 | 37.38 |
| CDY39665 | Canola | cytosol | 24.79 | 36.81 |
| CDX89594 | Canola | cytosol | 24.79 | 36.81 |
| CDX76853 | Canola | cytosol | 24.79 | 36.59 |
| CDY45243 | Canola | cytosol | 21.07 | 36.43 |
| GSMUA_Achr9P12270_001 | Banana | cytosol | 27.27 | 35.87 |
| CDY46066 | Canola | cytosol | 23.97 | 35.58 |
| CDY22462 | Canola | cytosol, nucleus, plastid | 25.21 | 35.26 |
| CDY42708 | Canola | nucleus | 24.79 | 35.09 |
| CDX72612 | Canola | nucleus | 24.38 | 34.5 |
| CDX77946 | Canola | cytosol | 21.07 | 34.46 |
| CDY24764 | Canola | cytosol, nucleus, plastid | 24.38 | 34.1 |
| CDX75606 | Canola | nucleus | 23.97 | 33.14 |
| CDX73789 | Canola | cytosol | 20.66 | 32.68 |
| CDX81387 | Canola | cytosol | 20.66 | 32.26 |
| CDX90684 | Canola | cytosol, nucleus, plastid | 20.66 | 32.05 |
| CDX69254 | Canola | cytosol | 23.55 | 32.02 |
| CDY55087 | Canola | cytosol | 19.83 | 31.79 |
| CDY18612 | Canola | cytosol | 20.25 | 31.61 |
| CDY28982 | Canola | nucleus | 20.25 | 31.41 |
| CDY28078 | Canola | cytosol | 19.83 | 30.0 |
| TraesCS6D01G158000.1 | Wheat | plastid | 23.55 | 29.84 |
| TraesCS6A01G168600.1 | Wheat | plastid | 24.38 | 29.8 |
| TraesCS6D01G158100.1 | Wheat | plastid | 22.73 | 29.73 |
| TraesCS6D01G157700.1 | Wheat | plastid | 23.97 | 29.59 |
| TraesCS6A01G168500.1 | Wheat | mitochondrion | 22.73 | 29.57 |
| TraesCS6B01G196500.1 | Wheat | plastid | 23.14 | 29.47 |
| HORVU6Hr1G034380.1 | Barley | plastid | 23.14 | 29.32 |
| TraesCS6B01G196600.1 | Wheat | plastid | 23.55 | 29.08 |
| TraesCS6D01G157600.1 | Wheat | plastid | 22.73 | 28.95 |
| Os02t0193300-01 | Rice | mitochondrion | 22.73 | 28.65 |
| HORVU6Hr1G034360.1 | Barley | mitochondrion, plastid | 20.25 | 28.0 |
| Os02t0193200-01 | Rice | mitochondrion | 22.73 | 27.5 |
| TraesCS7D01G390000.1 | Wheat | plastid | 21.49 | 26.53 |
| TraesCS7A01G394600.1 | Wheat | plastid | 21.49 | 26.53 |
| TraesCS7D01G390200.1 | Wheat | mitochondrion, plastid | 21.49 | 26.53 |
| EES06442 | Sorghum | plastid | 22.31 | 26.47 |
| TraesCS7B01G296600.1 | Wheat | plastid | 20.66 | 25.64 |
| TraesCS7B01G296700.1 | Wheat | plastid | 20.25 | 25.52 |
| TraesCS7A01G394700.1 | Wheat | mitochondrion, plastid | 21.07 | 25.5 |
| Os02t0193100-01 | Rice | cytosol, peroxisome, plastid | 21.9 | 25.36 |
| Zm00001d046687_P001 | Maize | plastid | 21.9 | 25.36 |
| EER88673 | Sorghum | plastid | 23.55 | 24.78 |
| Zm00001d015867_P001 | Maize | plastid | 21.9 | 24.77 |
| HORVU7Hr1G093050.1 | Barley | mitochondrion, plastid | 21.49 | 24.53 |
| Zm00001d036787_P001 | Maize | plastid | 21.9 | 24.42 |
| HORVU7Hr1G093080.1 | Barley | plastid | 21.07 | 24.17 |
| OQU84553 | Sorghum | plastid | 20.25 | 24.14 |
| TraesCS7D01G390100.1 | Wheat | plastid | 22.73 | 23.01 |
| HORVU6Hr1G034350.1 | Barley | cytosol | 18.59 | 21.43 |
Protein Annotations
| EnsemblPlants:CDY29485 | EnsemblPlantsGene:GSBRNA2T00043161001 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF15 | PFAM:PF14009 |
| ProteinID:CDY29485 | ProteinID:CDY29485.1 | SEG:seg | UniParc:UPI0004EEE06C | UniProt:A0A078GSM1 | MapMan:35.2 |
Description
BnaA06g14850DBnaA06g14850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GSM1]
Coordinates
chrLK032238:-:149898..150841
Molecular Weight (calculated)
26377.6 Da
IEP (calculated)
10.705
GRAVY (calculated)
-0.218
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNSVIRVVS TFVNLSLSQT SSSSFLTSIA MGICVSFHRR DSDSPPTVKI VSVNGDLREY HVPVLASQVL EAESAAASSS SSSSRPSSYF ICDSDSLLYD
101: DFIPAIKLEE PLQAEQIYFV LPVSKRQNRL TASDMAALAV KASVAIQNSV GKESRRRKKV RISPIMMLTQ PNDNAGNGKA SESTTVRKGR PLLNKTAPFK
201: ASSGYNRSGS VRNLKKYTSK RAKLAVRSFR LKLSTIYEGT VV
101: DFIPAIKLEE PLQAEQIYFV LPVSKRQNRL TASDMAALAV KASVAIQNSV GKESRRRKKV RISPIMMLTQ PNDNAGNGKA SESTTVRKGR PLLNKTAPFK
201: ASSGYNRSGS VRNLKKYTSK RAKLAVRSFR LKLSTIYEGT VV
001: MGICVSFRRE DSNSSPTVKI VTVNGDLREY NVPVIASQVL EAESAAAYSS SSSSRPSSYF ICDSDSLYYD DFIPAIKSEE PLQADQIYFV LPISKRQSRL
101: TASDMAALAV KASVAIQNSV KKESRRRKKV RISPVMMLTG SNDSVNGNGS ETTVKKGRPF VSKTAPVKAS SGINRSGSVR NLRRYTSKRA KLAVRSFRLK
201: LSTIYEGSVV
101: TASDMAALAV KASVAIQNSV KKESRRRKKV RISPVMMLTG SNDSVNGNGS ETTVKKGRPF VSKTAPVKAS SGINRSGSVR NLRRYTSKRA KLAVRSFRLK
201: LSTIYEGSVV
Arabidopsis Description
At1g21010 [Source:UniProtKB/TrEMBL;Acc:Q7XJ58]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.