Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77946 | Canola | cytosol | 93.46 | 96.62 |
| CDX90684 | Canola | cytosol, nucleus, plastid | 90.85 | 89.1 |
| CDY28982 | Canola | nucleus | 89.54 | 87.82 |
| AT3G50800.1 | Thale cress | cytosol, nucleus, plastid | 84.97 | 85.53 |
| CDY28078 | Canola | cytosol | 87.58 | 83.75 |
| CDY45243 | Canola | cytosol | 63.4 | 69.29 |
| CDY55087 | Canola | cytosol | 66.67 | 67.55 |
| CDY18612 | Canola | cytosol | 67.32 | 66.45 |
| CDX81387 | Canola | cytosol | 67.32 | 66.45 |
| CDY42708 | Canola | nucleus | 55.56 | 49.71 |
| CDX72612 | Canola | nucleus | 54.9 | 49.12 |
| CDY46066 | Canola | cytosol | 52.29 | 49.08 |
| CDY39665 | Canola | cytosol | 52.29 | 49.08 |
| CDX89594 | Canola | cytosol | 52.29 | 49.08 |
| CDY22462 | Canola | cytosol, nucleus, plastid | 54.9 | 48.55 |
| CDY24764 | Canola | cytosol, nucleus, plastid | 54.9 | 48.55 |
| CDX76853 | Canola | cytosol | 50.98 | 47.56 |
| CDX75606 | Canola | nucleus | 50.98 | 44.57 |
| CDX69254 | Canola | cytosol | 51.63 | 44.38 |
| GSMUA_Achr7P27420_001 | Banana | cytosol | 45.1 | 41.82 |
| GSMUA_Achr2P08730_001 | Banana | cytosol | 44.44 | 40.96 |
| Zm00001d013311_P001 | Maize | plastid | 33.99 | 32.5 |
| Os03t0740200-00 | Rice | plastid | 35.29 | 31.76 |
| TraesCS5A01G379900.1 | Wheat | plastid | 33.33 | 30.54 |
| KXG37596 | Sorghum | cytosol, nucleus, plastid | 33.33 | 30.54 |
| TraesCS5D01G389400.1 | Wheat | plastid | 33.33 | 30.18 |
| TraesCS2B01G276100.1 | Wheat | cytosol, extracellular, plastid | 36.6 | 29.79 |
| TraesCS2D01G257800.1 | Wheat | plastid | 37.25 | 29.69 |
| TraesCS2A01G266000.1 | Wheat | plastid | 37.25 | 29.69 |
| TraesCS5B01G383500.1 | Wheat | plastid | 33.33 | 29.65 |
| Os03t0768900-00 | Rice | cytosol | 33.99 | 29.55 |
| TraesCS5D01G414100.1 | Wheat | cytosol | 33.99 | 29.05 |
| Zm00001d033943_P001 | Maize | plastid | 31.37 | 28.92 |
| HORVU1Hr1G094330.1 | Barley | cytosol | 35.29 | 28.88 |
| TraesCS2D01G257700.1 | Wheat | mitochondrion, nucleus, plastid | 35.29 | 28.72 |
| TraesCS5B01G409000.1 | Wheat | cytosol | 32.03 | 28.66 |
| TraesCS1A01G436400.1 | Wheat | plastid | 35.29 | 28.57 |
| TraesCS1D01G444800.1 | Wheat | cytosol, plastid | 34.64 | 28.49 |
| TraesCS1A01G436300.1 | Wheat | mitochondrion | 35.29 | 28.42 |
| HORVU5Hr1G098290.1 | Barley | cytosol | 32.68 | 28.41 |
| TraesCS5D01G414300.1 | Wheat | cytosol | 32.68 | 28.41 |
| TraesCS5D01G414200.1 | Wheat | cytosol | 32.68 | 28.41 |
| TraesCS2B01G276000.1 | Wheat | cytosol, nucleus, plastid | 34.64 | 28.19 |
| TraesCS1B01G471500.1 | Wheat | mitochondrion | 33.99 | 28.11 |
| TraesCS5A01G404000.1 | Wheat | cytosol | 32.68 | 27.93 |
| TraesCS2A01G266100.1 | Wheat | cytosol | 30.07 | 27.88 |
| HORVU5Hr1G098280.1 | Barley | cytosol | 32.03 | 27.84 |
| TraesCS5A01G404100.1 | Wheat | cytosol | 32.03 | 27.84 |
| TraesCS5A01G404200.1 | Wheat | cytosol | 32.03 | 27.84 |
| TraesCS5B01G408700.1 | Wheat | cytosol | 33.33 | 27.72 |
| Zm00001d034190_P001 | Maize | cytosol | 32.68 | 27.47 |
| TraesCS1D01G444700.1 | Wheat | cytosol, extracellular, peroxisome, plastid | 33.33 | 27.42 |
| TraesCS5D01G414000.1 | Wheat | cytosol | 32.03 | 27.37 |
| HORVU2Hr1G061800.1 | Barley | plastid | 33.99 | 27.37 |
| TraesCS5B01G408800.1 | Wheat | cytosol | 31.37 | 27.27 |
| EER95817 | Sorghum | nucleus | 33.99 | 26.8 |
| EER93387 | Sorghum | cytosol | 32.68 | 26.6 |
| Os07t0123100-00 | Rice | extracellular | 34.64 | 25.85 |
| Zm00001d013178_P001 | Maize | cytosol | 30.72 | 25.27 |
| HORVU5Hr1G093900.1 | Barley | plastid | 28.76 | 25.14 |
| HORVU5Hr1G098260.1 | Barley | cytosol, mitochondrion | 34.64 | 24.77 |
| Zm00001d018717_P001 | Maize | cytosol | 31.37 | 24.74 |
| CDY33663 | Canola | cytosol | 32.68 | 24.15 |
| CDX96609 | Canola | cytosol | 32.68 | 23.81 |
| CDY01339 | Canola | nucleus | 32.03 | 23.67 |
| CDY00357 | Canola | nucleus | 32.03 | 23.67 |
| CDY20399 | Canola | nucleus, plastid | 32.68 | 23.47 |
| CDY45978 | Canola | nucleus | 32.03 | 23.11 |
| CDX85960 | Canola | cytosol | 31.37 | 23.08 |
| CDX68092 | Canola | cytosol, plastid | 31.37 | 22.86 |
| Zm00001d007974_P001 | Maize | nucleus | 28.76 | 22.8 |
| TraesCS5A01G403900.1 | Wheat | plastid | 32.68 | 21.46 |
| CDY04592 | Canola | plastid | 32.68 | 20.75 |
| CDY29485 | Canola | plastid | 32.68 | 20.66 |
| CDY06423 | Canola | cytosol | 19.61 | 18.63 |
| HORVU2Hr1G061850.1 | Barley | extracellular, plastid | 21.57 | 16.67 |
Protein Annotations
| EnsemblPlants:CDX73789 | EnsemblPlantsGene:GSBRNA2T00109408001 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF17 | PFAM:PF14009 |
| ProteinID:CDX73789 | ProteinID:CDX73789.1 | SEG:seg | UniParc:UPI0004EDE7EB | MapMan:35.2 | : |
Description
BnaC08g22140D
Coordinates
chrLK031799:+:2755528..2756114
Molecular Weight (calculated)
16538.6 Da
IEP (calculated)
8.382
GRAVY (calculated)
-0.393
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTCSSSESR RTETAKLILP DGTLQEFSSP VKVWQILQKN PTSFVCNSDD MDFDDAVVAV GGSEDLRPGE LYFVLPLTWL NHPLRAEQMA ALAVKASSAL
101: TKSGWSCSHE GEGRRVSGGE CRVKRVKRNG CGGRGCGGKG RRKFTVELSS IAE
101: TKSGWSCSHE GEGRRVSGGE CRVKRVKRNG CGGRGCGGKG RRKFTVELSS IAE
001: MGACASRESR RTETAKLILP DGTLQEFSTP VKVWQILQKN PTSFVCNSDD MDFDDAVLAV PGSEDLRPGE LYFVLPLTWL NHPLRADEMA ALAVKASSAL
101: AKSGGGGLSY NDEDVGECRV RRVKRNGCGG RGCGGGGKGR RKFTAELSSI AE
101: AKSGGGGLSY NDEDVGECRV RRVKRNGCGG RGCGGGGKGR RKFTAELSSI AE
Arabidopsis Description
Uncharacterized protein At3g50800 [Source:UniProtKB/TrEMBL;Acc:Q9SVL8]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.