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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • vacuole 1
  • mitochondrion 1
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90684 Canola cytosol, nucleus, plastid 100.0 100.0
Bra036862.1-P Field mustard cytosol 83.97 88.51
AT3G50800.1 Thale cress cytosol, nucleus, plastid 82.05 84.21
Bra012084.1-P Field mustard cytosol 60.9 67.86
Bra037163.1-P Field mustard cytosol 66.67 67.1
Bra031814.1-P Field mustard cytosol 64.74 66.89
Bra017789.1-P Field mustard nucleus 55.77 50.88
Bra032151.1-P Field mustard cytosol 52.56 50.31
Bra039208.1-P Field mustard cytosol 41.67 46.76
Bra010578.1-P Field mustard cytosol, nucleus, plastid 44.23 46.0
Bra011715.1-P Field mustard nucleus 51.28 45.71
GSMUA_Achr7P27420_001 Banana cytosol 43.59 41.21
GSMUA_Achr2P08730_001 Banana cytosol 43.59 40.96
Zm00001d013311_P001 Maize plastid 33.97 33.12
Os03t0740200-00 Rice plastid 35.26 32.35
KXG37596 Sorghum cytosol, nucleus, plastid 33.33 31.14
TraesCS5A01G379900.1 Wheat plastid 33.33 31.14
TraesCS5D01G389400.1 Wheat plastid 33.33 30.77
TraesCS5B01G383500.1 Wheat plastid 33.33 30.23
Zm00001d033943_P001 Maize plastid 31.41 29.52
TraesCS2B01G276100.1 Wheat cytosol, extracellular, plastid 35.26 29.26
TraesCS2A01G266000.1 Wheat plastid 35.9 29.17
TraesCS2D01G257800.1 Wheat plastid 35.9 29.17
TraesCS2D01G257700.1 Wheat mitochondrion, nucleus, plastid 34.62 28.72
TraesCS5D01G414100.1 Wheat cytosol 32.69 28.49
Os03t0768900-00 Rice cytosol 32.05 28.41
HORVU1Hr1G094330.1 Barley cytosol 33.97 28.34
TraesCS2B01G276000.1 Wheat cytosol, nucleus, plastid 33.97 28.19
TraesCS5B01G409000.1 Wheat cytosol 30.77 28.07
TraesCS1A01G436400.1 Wheat plastid 33.97 28.04
TraesCS1D01G444800.1 Wheat cytosol, plastid 33.33 27.96
TraesCS1A01G436300.1 Wheat mitochondrion 33.97 27.89
TraesCS2A01G266100.1 Wheat cytosol 29.49 27.88
TraesCS5D01G414300.1 Wheat cytosol 31.41 27.84
TraesCS5D01G414200.1 Wheat cytosol 31.41 27.84
Zm00001d034190_P001 Maize cytosol 32.05 27.47
EER95817 Sorghum nucleus 33.97 27.32
HORVU5Hr1G098290.1 Barley cytosol 30.77 27.27
HORVU5Hr1G098280.1 Barley cytosol 30.77 27.27
TraesCS5A01G404100.1 Wheat cytosol 30.77 27.27
TraesCS5A01G404200.1 Wheat cytosol 30.77 27.27
TraesCS5B01G408700.1 Wheat cytosol 32.05 27.17
TraesCS1B01G471500.1 Wheat mitochondrion 32.05 27.03
TraesCS1D01G444700.1 Wheat cytosol, extracellular, peroxisome, plastid 32.05 26.88
HORVU2Hr1G061800.1 Barley plastid 32.69 26.84
TraesCS5A01G404000.1 Wheat cytosol 30.77 26.82
TraesCS5B01G408800.1 Wheat cytosol 30.13 26.7
EER93387 Sorghum cytosol 32.05 26.6
TraesCS5D01G414000.1 Wheat cytosol 30.13 26.26
HORVU5Hr1G093900.1 Barley plastid 28.85 25.71
Os07t0123100-00 Rice extracellular 33.33 25.37
Zm00001d013178_P001 Maize cytosol 30.13 25.27
Zm00001d018717_P001 Maize cytosol 30.77 24.74
Bra012264.1-P Field mustard cytosol 32.69 24.64
HORVU5Hr1G098260.1 Barley cytosol, mitochondrion 33.33 24.3
Bra016439.1-P Field mustard cytosol 32.05 23.81
Bra025866.1-P Field mustard cytosol 32.05 23.58
Zm00001d007974_P001 Maize nucleus 28.85 23.32
Bra008267.1-P Field mustard nucleus 31.41 23.11
Bra003714.1-P Field mustard cytosol 30.77 22.86
TraesCS5A01G403900.1 Wheat plastid 30.77 20.6
HORVU2Hr1G061850.1 Barley extracellular, plastid 20.51 16.16
Protein Annotations
EnsemblPlants:Bra012887.1EnsemblPlants:Bra012887.1-PEnsemblPlantsGene:Bra012887InterPro:DUF4228_plantPANTHER:PTHR33052PANTHER:PTHR33052:SF17
PFAM:PF14009SEG:segUniParc:UPI000254065FUniProt:M4D8S7MapMan:35.2:
Description
AT3G50800 (E=3e-053) | unknown protein
Coordinates
chrA03:-:21731333..21731803
Molecular Weight (calculated)
16643.7 Da
IEP (calculated)
8.114
GRAVY (calculated)
-0.386
Length
156 amino acids
Sequence
(BLAST)
001: MGACGSSESR RTDTAKLILQ DGTLQEFTSP VKVWQILQKN PTSFVCNSDD MDFDDAVIAV GGSEDLRPGE LYFVLPLTWL NHPLRAEQMA ALAVKASSAL
101: NKSGWSCGDD GDARKVSGGE CGRVKRVKRN SCGGRGCGGG GKGRRKFTVE LSSIAE
Best Arabidopsis Sequence Match ( AT3G50800.1 )
(BLAST)
001: MGACASRESR RTETAKLILP DGTLQEFSTP VKVWQILQKN PTSFVCNSDD MDFDDAVLAV PGSEDLRPGE LYFVLPLTWL NHPLRADEMA ALAVKASSAL
101: AKSGGGGLSY NDEDVGECRV RRVKRNGCGG RGCGGGGKGR RKFTAELSSI AE
Arabidopsis Description
Uncharacterized protein At3g50800 [Source:UniProtKB/TrEMBL;Acc:Q9SVL8]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.