Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0207g00180.t01 | Wine grape | cytosol | 98.77 | 98.77 |
| KRH76906 | Soybean | cytosol | 65.64 | 67.3 |
| Solyc02g089990.1.1 | Tomato | nucleus | 63.19 | 63.98 |
| PGSC0003DMT400026013 | Potato | cytosol, nucleus, plastid | 63.19 | 63.58 |
| KRH28562 | Soybean | cytosol | 61.35 | 61.35 |
| Solyc03g044860.1.1 | Tomato | cytosol | 54.6 | 60.96 |
| PGSC0003DMT400059007 | Potato | cytosol, nucleus, plastid | 53.37 | 60.0 |
| PGSC0003DMT400007187 | Potato | cytosol | 53.99 | 57.89 |
| Solyc02g065430.1.1 | Tomato | cytosol | 52.76 | 56.58 |
| VIT_03s0063g01940.t01 | Wine grape | cytosol | 58.28 | 54.6 |
| GSMUA_Achr7P27420_001 | Banana | cytosol | 52.76 | 52.12 |
| KRH69989 | Soybean | cytosol | 52.76 | 52.12 |
| GSMUA_Achr2P08730_001 | Banana | cytosol | 52.15 | 51.2 |
| KRH08345 | Soybean | cytosol | 50.92 | 48.54 |
| Os03t0740200-00 | Rice | plastid | 36.81 | 35.29 |
| TraesCS5A01G379900.1 | Wheat | plastid | 34.97 | 34.13 |
| VIT_18s0122g00300.t01 | Wine grape | plastid | 39.88 | 34.03 |
| TraesCS5D01G389400.1 | Wheat | plastid | 34.97 | 33.73 |
| HORVU5Hr1G098280.1 | Barley | cytosol | 36.2 | 33.52 |
| TraesCS5B01G383500.1 | Wheat | plastid | 34.97 | 33.14 |
| Zm00001d033943_P001 | Maize | plastid | 33.74 | 33.13 |
| Os03t0768900-00 | Rice | cytosol | 35.58 | 32.95 |
| TraesCS5A01G404200.1 | Wheat | cytosol | 35.58 | 32.95 |
| KXG37596 | Sorghum | cytosol, nucleus, plastid | 33.74 | 32.93 |
| Zm00001d013311_P001 | Maize | plastid | 31.9 | 32.5 |
| TraesCS5A01G404100.1 | Wheat | cytosol | 34.97 | 32.39 |
| TraesCS5D01G414200.1 | Wheat | cytosol | 34.97 | 32.39 |
| Zm00001d034190_P001 | Maize | cytosol | 35.58 | 31.87 |
| TraesCS5D01G414000.1 | Wheat | cytosol | 34.97 | 31.84 |
| TraesCS5D01G414300.1 | Wheat | cytosol | 34.36 | 31.82 |
| HORVU5Hr1G098290.1 | Barley | cytosol | 34.36 | 31.82 |
| TraesCS5B01G409000.1 | Wheat | cytosol | 33.13 | 31.58 |
| TraesCS5B01G408800.1 | Wheat | cytosol | 33.74 | 31.25 |
| TraesCS5D01G414100.1 | Wheat | cytosol | 33.74 | 30.73 |
| EER93387 | Sorghum | cytosol | 34.97 | 30.32 |
| TraesCS2D01G257700.1 | Wheat | mitochondrion, nucleus, plastid | 34.97 | 30.32 |
| TraesCS5A01G404000.1 | Wheat | cytosol | 33.13 | 30.17 |
| TraesCS1D01G444700.1 | Wheat | cytosol, extracellular, peroxisome, plastid | 34.36 | 30.11 |
| TraesCS1A01G436300.1 | Wheat | mitochondrion | 34.97 | 30.0 |
| TraesCS5B01G408700.1 | Wheat | cytosol | 33.74 | 29.89 |
| TraesCS2B01G276100.1 | Wheat | cytosol, extracellular, plastid | 34.36 | 29.79 |
| TraesCS2B01G276000.1 | Wheat | cytosol, nucleus, plastid | 34.36 | 29.79 |
| TraesCS1B01G471500.1 | Wheat | mitochondrion | 33.74 | 29.73 |
| HORVU5Hr1G093900.1 | Barley | plastid | 31.9 | 29.71 |
| TraesCS2A01G266100.1 | Wheat | cytosol | 30.06 | 29.7 |
| TraesCS2D01G257800.1 | Wheat | plastid | 34.97 | 29.69 |
| TraesCS1A01G436400.1 | Wheat | plastid | 34.36 | 29.63 |
| TraesCS1D01G444800.1 | Wheat | cytosol, plastid | 33.74 | 29.57 |
| Zm00001d013178_P001 | Maize | cytosol | 33.74 | 29.57 |
| HORVU1Hr1G094330.1 | Barley | cytosol | 33.74 | 29.41 |
| TraesCS2A01G266000.1 | Wheat | plastid | 34.36 | 29.17 |
| HORVU2Hr1G061800.1 | Barley | plastid | 33.74 | 28.95 |
| Os07t0123100-00 | Rice | extracellular | 33.74 | 26.83 |
| HORVU5Hr1G098260.1 | Barley | cytosol, mitochondrion | 34.97 | 26.64 |
| Zm00001d018717_P001 | Maize | cytosol | 30.67 | 25.77 |
| EER95817 | Sorghum | nucleus | 30.67 | 25.77 |
| VIT_03s0063g01950.t01 | Wine grape | plastid | 30.06 | 24.87 |
| TraesCS5A01G403900.1 | Wheat | plastid | 34.36 | 24.03 |
| Zm00001d007974_P001 | Maize | nucleus | 26.99 | 22.8 |
| HORVU2Hr1G061850.1 | Barley | extracellular, plastid | 23.93 | 19.7 |
Protein Annotations
| ArrayExpress:VIT_00s0207g00140 | EMBL:AM472566 | EMBL:FN596526 | EnsemblPlants:VIT_00s0207g00140.t01 | EnsemblPlantsGene:VIT_00s0207g00140 | EntrezGene:104878188 |
| InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF17 | PFAM:PF14009 | ProteinID:CAN61825 | ProteinID:CAN61825.1 |
| ProteinID:CCB60990 | ProteinID:CCB60990.1 | RefSeq:XP_010646383.1 | SEG:seg | UniParc:UPI0001986182 | UniProt:F6I223 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrUn:-:12477979..12478788
Molecular Weight (calculated)
17475.9 Da
IEP (calculated)
8.108
GRAVY (calculated)
-0.323
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MGICSSCDAT SVATAKLILQ DGRLEEFSYP VKVSYVLQKN PSCFICNSDE MDFDDVVSAI HDDEELQPGQ LYFALPLSRL KQPLQAEEMA ALAVKASSAL
101: MKSGGDKCRC RRKSLSPVMF AGEKDSKSSG RVAPGGGVEG GLRRGRNGGG RRNSARLLSS IPE
101: MKSGGDKCRC RRKSLSPVMF AGEKDSKSSG RVAPGGGVEG GLRRGRNGGG RRNSARLLSS IPE
001: MGICSSYEST QVATAKLILH DGRMMEFTSP VKVGYVLQKN PMCFICNSDD MDFDNVVSAI SADEEFQLGQ LYFALPLSSL HHSLKAEEMA ALAVKASSAL
101: MRSGGSCGRD KCRCRRKCVS PVIFSARRVA AVGANGETRN GKRRGGGGSG RRKYAAKLSK IEE
101: MRSGGSCGRD KCRCRRKCVS PVIFSARRVA AVGANGETRN GKRRGGGGSG RRKYAAKLSK IEE
Arabidopsis Description
HTH-type transcriptional regulator [Source:UniProtKB/TrEMBL;Acc:Q680G2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.