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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 3
  • nucleus 1
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400054224 Potato cytosol 89.3 87.14
VIT_06s0004g01780.t01 Wine grape cytosol 61.44 60.24
Bra018898.1-P Field mustard cytosol 42.79 59.93
KRH23156 Soybean cytosol 57.46 59.84
CDY25216 Canola cytosol 55.47 58.68
CDY22830 Canola cytosol, plastid 55.22 58.42
AT1G51170.1 Thale cress plastid 55.97 55.69
KRH29689 Soybean cytosol 56.47 55.23
KRH24685 Soybean cytosol 57.46 55.13
GSMUA_Achr5P22330_001 Banana cytosol 43.03 55.1
AT3G20830.1 Thale cress cytosol, plastid 54.98 54.17
CDY06386 Canola nucleus, plastid 53.73 53.87
CDY19600 Canola plastid 53.98 53.85
Bra035740.1-P Field mustard plastid 53.73 53.6
GSMUA_Achr7P02080_001 Banana cytosol, mitochondrion 47.51 48.23
Os08t0504800-01 Rice cytosol 49.75 47.28
TraesCS7D01G243600.1 Wheat cytosol 49.25 46.37
EER99080 Sorghum cytosol, nucleus, peroxisome 50.0 45.89
TraesCS7A01G244900.1 Wheat cytosol 49.01 45.81
TraesCS7B01G146500.1 Wheat cytosol 48.76 45.79
TraesCS5A01G263600.1 Wheat cytosol 50.0 45.79
TraesCS5B01G263000.1 Wheat cytosol 50.0 45.68
Zm00001d031426_P001 Maize cytosol 50.0 45.48
Zm00001d020927_P001 Maize cytosol 49.75 45.45
EES15407 Sorghum cytosol 49.75 45.15
Zm00001d006017_P001 Maize cytosol 48.51 44.52
Os09t0486700-01 Rice cytosol 50.0 44.18
TraesCS5D01G271200.1 Wheat cytosol 50.25 43.16
HORVU5Hr1G072930.1 Barley mitochondrion 48.76 42.15
HORVU7Hr1G050240.1 Barley mitochondrion 48.51 41.49
Solyc09g056430.2.1 Tomato cytosol 40.55 41.16
TraesCS5A01G192800.1 Wheat cytosol 13.68 40.74
TraesCS7A01G426500.1 Wheat cytosol 13.43 40.3
Solyc01g097770.2.1 Tomato plastid 36.57 15.39
Solyc11g072710.1.1 Tomato plastid 37.81 14.95
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.6.5Gene3D:3.30.200.20GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005886GO:GO:0006464GO:GO:0006468
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0035556InterPro:IPR000719UniProt:K4D8Y4
InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24351
PANTHER:PTHR24351:SF107InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:Solyc11g061720.1EnsemblPlants:Solyc11g061720.1.1UniParc:UPI00027693ABSEG:seg::
Description
No Description!
Coordinates
chr11:-:48256795..48258003
Molecular Weight (calculated)
46063.2 Da
IEP (calculated)
9.160
GRAVY (calculated)
-0.387
Length
402 amino acids
Sequence
(BLAST)
001: MDTIKSSDLI LNNLRVIKLL GKGAMGTVFL VHDIFHDPSA LSPFALKAVD KSNFSSNAIH RRALWETTLL SRLQHPFLPT LIGFTENSDF ICYAVPYCPG
101: GDLNVLRYTQ SDHVFSPSAI RFYLAEIVLA LEYLHTLGIA YRDLKPENVL IQQSGHVTLT DFDLSTTLTP KKNLEFYSDP ENNDILSTQS QPQTFKFSKF
201: AKSMVKCKSN ARNGLRKVKS ARVSPVSRRN RSSFYERSNS FVGTEEYVAP EIIRGEGHEF SVDWWALGIL CYEMLYGTTP FKGKNRKETF RRILMTEPEF
301: IGRKNDLADL IGKLLEKDPT RRLGYRRGAS EVKEHEFFRG MKWDRLTEVV RPPFLPLRDV TEEEKKGGIT ITEYFQKLKA PPSPLWSPSH DEWTNNISLT
401: EF
Best Arabidopsis Sequence Match ( AT1G51170.1 )
(BLAST)
001: METRPSSSSS LSPATNLNLD RLKVLKLLGK GATGTVFLVH DSVSDSSVSS PFALKLVDKS SASSLRRARW EIQILRRLSD DTNPNPFLPK LLASSESSEF
101: IAWALPYCSG GDLNVLRQRQ NDGVFSSSVI KFYLAEIVCA LDHLHTMGIA YRDLKPENIL LQESGHVTLT DFDLSCSLNK PTRPEFYHLS DPEPDPNPES
201: NLSHNKKSLR IFRQKKKKTK SARVNPITRR RLSFSGGERS NSFVGTDEYI SPEVIRGDGH DFAVDWWALG VLTYEMMYGE TPFKGRNKKE TFRNVLVKEP
301: EFAGKPSDLT DLIRRLLVKD PTKRFGFWRG AAEIKEHAFF KGVRWELLTE VLRPPFIPLR DDGDLTGKVT EESGFGIKEY FEKLKTPPLP LPHECSENNP
401: FVDF
Arabidopsis Description
UNCSerine/threonine-protein kinase UCN [Source:UniProtKB/Swiss-Prot;Acc:Q9SYB9]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.