Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- nucleus 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
Solyc03g005240.1.1 | |
Solyc06g053930.2.1 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT1G51170.1 | Solyc03g005240.1.1 | AT4G14640.1 | 17360592 |
AT1G51170.1 | Solyc06g053930.2.1 | AT4G14640.1 | 17360592 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400054224 | Potato | cytosol | 89.3 | 87.14 |
VIT_06s0004g01780.t01 | Wine grape | cytosol | 61.44 | 60.24 |
Bra018898.1-P | Field mustard | cytosol | 42.79 | 59.93 |
KRH23156 | Soybean | cytosol | 57.46 | 59.84 |
CDY25216 | Canola | cytosol | 55.47 | 58.68 |
CDY22830 | Canola | cytosol, plastid | 55.22 | 58.42 |
AT1G51170.1 | Thale cress | plastid | 55.97 | 55.69 |
KRH29689 | Soybean | cytosol | 56.47 | 55.23 |
KRH24685 | Soybean | cytosol | 57.46 | 55.13 |
GSMUA_Achr5P22330_001 | Banana | cytosol | 43.03 | 55.1 |
AT3G20830.1 | Thale cress | cytosol, plastid | 54.98 | 54.17 |
CDY06386 | Canola | nucleus, plastid | 53.73 | 53.87 |
CDY19600 | Canola | plastid | 53.98 | 53.85 |
Bra035740.1-P | Field mustard | plastid | 53.73 | 53.6 |
GSMUA_Achr7P02080_001 | Banana | cytosol, mitochondrion | 47.51 | 48.23 |
Os08t0504800-01 | Rice | cytosol | 49.75 | 47.28 |
TraesCS7D01G243600.1 | Wheat | cytosol | 49.25 | 46.37 |
EER99080 | Sorghum | cytosol, nucleus, peroxisome | 50.0 | 45.89 |
TraesCS7A01G244900.1 | Wheat | cytosol | 49.01 | 45.81 |
TraesCS7B01G146500.1 | Wheat | cytosol | 48.76 | 45.79 |
TraesCS5A01G263600.1 | Wheat | cytosol | 50.0 | 45.79 |
TraesCS5B01G263000.1 | Wheat | cytosol | 50.0 | 45.68 |
Zm00001d031426_P001 | Maize | cytosol | 50.0 | 45.48 |
Zm00001d020927_P001 | Maize | cytosol | 49.75 | 45.45 |
EES15407 | Sorghum | cytosol | 49.75 | 45.15 |
Zm00001d006017_P001 | Maize | cytosol | 48.51 | 44.52 |
Os09t0486700-01 | Rice | cytosol | 50.0 | 44.18 |
TraesCS5D01G271200.1 | Wheat | cytosol | 50.25 | 43.16 |
HORVU5Hr1G072930.1 | Barley | mitochondrion | 48.76 | 42.15 |
HORVU7Hr1G050240.1 | Barley | mitochondrion | 48.51 | 41.49 |
Solyc09g056430.2.1 | Tomato | cytosol | 40.55 | 41.16 |
TraesCS5A01G192800.1 | Wheat | cytosol | 13.68 | 40.74 |
TraesCS7A01G426500.1 | Wheat | cytosol | 13.43 | 40.3 |
Solyc01g097770.2.1 | Tomato | plastid | 36.57 | 15.39 |
Solyc11g072710.1.1 | Tomato | plastid | 37.81 | 14.95 |
Protein Annotations
Gene3D:1.10.510.10 | MapMan:18.4.6.5 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005886 | GO:GO:0006464 | GO:GO:0006468 |
GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 |
GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0035556 | InterPro:IPR000719 | UniProt:K4D8Y4 |
InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24351 |
PANTHER:PTHR24351:SF107 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
EnsemblPlantsGene:Solyc11g061720.1 | EnsemblPlants:Solyc11g061720.1.1 | UniParc:UPI00027693AB | SEG:seg | : | : |
Description
No Description!
Coordinates
chr11:-:48256795..48258003
Molecular Weight (calculated)
46063.2 Da
IEP (calculated)
9.160
GRAVY (calculated)
-0.387
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTIKSSDLI LNNLRVIKLL GKGAMGTVFL VHDIFHDPSA LSPFALKAVD KSNFSSNAIH RRALWETTLL SRLQHPFLPT LIGFTENSDF ICYAVPYCPG
101: GDLNVLRYTQ SDHVFSPSAI RFYLAEIVLA LEYLHTLGIA YRDLKPENVL IQQSGHVTLT DFDLSTTLTP KKNLEFYSDP ENNDILSTQS QPQTFKFSKF
201: AKSMVKCKSN ARNGLRKVKS ARVSPVSRRN RSSFYERSNS FVGTEEYVAP EIIRGEGHEF SVDWWALGIL CYEMLYGTTP FKGKNRKETF RRILMTEPEF
301: IGRKNDLADL IGKLLEKDPT RRLGYRRGAS EVKEHEFFRG MKWDRLTEVV RPPFLPLRDV TEEEKKGGIT ITEYFQKLKA PPSPLWSPSH DEWTNNISLT
401: EF
101: GDLNVLRYTQ SDHVFSPSAI RFYLAEIVLA LEYLHTLGIA YRDLKPENVL IQQSGHVTLT DFDLSTTLTP KKNLEFYSDP ENNDILSTQS QPQTFKFSKF
201: AKSMVKCKSN ARNGLRKVKS ARVSPVSRRN RSSFYERSNS FVGTEEYVAP EIIRGEGHEF SVDWWALGIL CYEMLYGTTP FKGKNRKETF RRILMTEPEF
301: IGRKNDLADL IGKLLEKDPT RRLGYRRGAS EVKEHEFFRG MKWDRLTEVV RPPFLPLRDV TEEEKKGGIT ITEYFQKLKA PPSPLWSPSH DEWTNNISLT
401: EF
001: METRPSSSSS LSPATNLNLD RLKVLKLLGK GATGTVFLVH DSVSDSSVSS PFALKLVDKS SASSLRRARW EIQILRRLSD DTNPNPFLPK LLASSESSEF
101: IAWALPYCSG GDLNVLRQRQ NDGVFSSSVI KFYLAEIVCA LDHLHTMGIA YRDLKPENIL LQESGHVTLT DFDLSCSLNK PTRPEFYHLS DPEPDPNPES
201: NLSHNKKSLR IFRQKKKKTK SARVNPITRR RLSFSGGERS NSFVGTDEYI SPEVIRGDGH DFAVDWWALG VLTYEMMYGE TPFKGRNKKE TFRNVLVKEP
301: EFAGKPSDLT DLIRRLLVKD PTKRFGFWRG AAEIKEHAFF KGVRWELLTE VLRPPFIPLR DDGDLTGKVT EESGFGIKEY FEKLKTPPLP LPHECSENNP
401: FVDF
101: IAWALPYCSG GDLNVLRQRQ NDGVFSSSVI KFYLAEIVCA LDHLHTMGIA YRDLKPENIL LQESGHVTLT DFDLSCSLNK PTRPEFYHLS DPEPDPNPES
201: NLSHNKKSLR IFRQKKKKTK SARVNPITRR RLSFSGGERS NSFVGTDEYI SPEVIRGDGH DFAVDWWALG VLTYEMMYGE TPFKGRNKKE TFRNVLVKEP
301: EFAGKPSDLT DLIRRLLVKD PTKRFGFWRG AAEIKEHAFF KGVRWELLTE VLRPPFIPLR DDGDLTGKVT EESGFGIKEY FEKLKTPPLP LPHECSENNP
401: FVDF
Arabidopsis Description
UNCSerine/threonine-protein kinase UCN [Source:UniProtKB/Swiss-Prot;Acc:Q9SYB9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.