CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51170.1	KRH31638	AT4G14640.1	17360592
AT1G51170.1	KRH69070	AT4G14640.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29689	Soybean	cytosol	87.35	89.05
KRH23156	Soybean	cytosol	63.01	68.39
VIT_06s0004g01780.t01	Wine grape	cytosol	65.39	66.83
Bra018898.1-P	Field mustard	cytosol	43.91	64.11
AT3G20830.1	Thale cress	cytosol, plastid	59.19	60.78
CDY25216	Canola	cytosol	54.65	60.26
GSMUA_Achr5P22330_001	Banana	cytosol	44.87	59.87
CDY22830	Canola	cytosol, plastid	54.18	59.74
CDY19600	Canola	plastid	56.8	59.06
CDY06386	Canola	nucleus, plastid	56.09	58.6
Bra035740.1-P	Field mustard	plastid	56.32	58.56
PGSC0003DMT400054224	Potato	cytosol	57.52	58.5
AT1G51170.1	Thale cress	plastid	55.61	57.67
Solyc11g061720.1.1	Tomato	cytosol	55.13	57.46
GSMUA_Achr7P02080_001	Banana	cytosol, mitochondrion	50.12	53.03
Os08t0504800-01	Rice	cytosol	52.03	51.54
Zm00001d020927_P001	Maize	cytosol	52.27	49.77
EER99080	Sorghum	cytosol, nucleus, peroxisome	52.03	49.77
TraesCS7A01G244900.1	Wheat	cytosol	50.6	49.3
TraesCS7D01G243600.1	Wheat	cytosol	49.88	48.95
TraesCS7B01G146500.1	Wheat	cytosol	49.88	48.83
Zm00001d006017_P001	Maize	cytosol	50.84	48.63
TraesCS5A01G263600.1	Wheat	cytosol	50.12	47.84
EES15407	Sorghum	cytosol	50.36	47.63
Zm00001d031426_P001	Maize	cytosol	50.12	47.51
TraesCS5B01G263000.1	Wheat	cytosol	49.88	47.5
Os09t0486700-01	Rice	cytosol	51.07	47.03
TraesCS5D01G271200.1	Wheat	cytosol	50.6	45.3
HORVU7Hr1G050240.1	Barley	mitochondrion	50.36	44.89
HORVU5Hr1G072930.1	Barley	mitochondrion	49.16	44.3
KRH45318	Soybean	cytosol	17.9	41.67
TraesCS7A01G426500.1	Wheat	cytosol	13.13	41.04
TraesCS5A01G192800.1	Wheat	cytosol	13.13	40.74
KRH07383	Soybean	cytosol	39.14	37.79
KRH66186	Soybean	cytosol	37.47	36.01
KRH46605	Soybean	cytosol	36.75	34.61
KRH10351	Soybean	nucleus, plastid	34.61	15.07
KRH22966	Soybean	nucleus, plastid	34.37	14.66
KRH24973	Soybean	cytosol	33.17	14.23
KRH07591	Soybean	cytosol	33.41	14.14
KRH45326	Soybean	cytosol	15.51	7.97

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100785281	MapMan:18.4.6.5	Gene3D:3.30.200.20	EMBL:ACUP02007182	EnsemblPlantsGene:GLYMA_12G056000
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0035556	UniProt:I1LQH9	InterPro:IPR000719	EnsemblPlants:KRH24685	ProteinID:KRH24685	ProteinID:KRH24685.1
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351
PANTHER:PTHR24351:SF107	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000233C409	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:4069019..4070817

Molecular Weight (calculated)

47346.9 Da

IEP (calculated)

10.279

GRAVY (calculated)

-0.478

Length

419 amino acids

Sequence
(BLAST)

001: MDSARTAPPP WQELDLDSLK PLKVLGKGGM GTVFLVQAAN NTRFALKVVD KTCVHAKLDA ERRARWEIQV LSTLSHPFLP SLMGTFESPQ FLAWALPYCP
101: GGDLNVLRYR QTDRAFSPAV IRFYVAEILC ALDHLHSMGI AYRDLKPENV LVQNTGHITL TDFDLSRKLN PKPKPNPQVP SIPLPNSNVP EPRRKHRRNF
201: SRWISLFPPD GTHHNNNKNG LKKAKSARVS PVSRRKPSFS NGERSNSFVG TEEYVSPEVV RGDGHEFAVD WWALGILIYE MLYGTTPFKG KNRKETFRNV
301: ITKPPVFVGK RTALTDLIEK LLEKDPTKRL GYTRGAVEIK EHEFFRGVRW ELLTEVVRPP FIPTRDDGAG DSTDRISDRN CGFDIRGYFL NLKSSPSLPG
401: SPLPSPSCRF KKNVSLTEF

Best Arabidopsis Sequence Match ( AT3G20830.1 )
(BLAST)

001: MEPSPSSPPS SPPEILDLDS IKALKILGKG ATGTVFLAHD VVSTSSSSSP FAVKLVPKSS ASSLRRARWE IEVLRRLSVD SNQNPFLPRL LASFESPEYF
101: AWAVPYCSGG DLNVLLHRQN DGVFSSSVIR FYVAEIVCAL EHLHTMGIAY RDLKPENILI QQSGHVTLTD FDLSRSLKKP LRPHFYQPDP ELIIDRKKSR
201: SFSRLISPTA EKNKTGLKKT RSARVNPINR RKTSFSSGER SNSFVGTDEY VSPEVIRGDG HDFAVDWWAL GVLTYEMMYG ETPFKGKSKK ETFRNVLMKE
301: PEFAGKPNDL TDLIRRLLVK DPNRRLGCHR GAAEIKELAF FAGVRWDLLT EVLRPPFIPL RDDGELTVGG FDIREHFEKL RTTPSSAPPS PLRSPPHVCR
401: KNDPFIEF

Arabidopsis Description

UCNLSerine/threonine-protein kinase UCNL [Source:UniProtKB/Swiss-Prot;Acc:Q9LT38]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.