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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 2
  • plastid 2
  • cytosol 2
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

locusBlocations
CDY06478

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G51170.1 CDY06478 AT4G14640.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra018898.1-P Field mustard cytosol 75.0 99.3
CDY25216 Canola cytosol 98.16 98.16
AT1G51170.1 Thale cress plastid 88.95 83.66
CDY19600 Canola plastid 75.79 71.46
CDY06386 Canola nucleus, plastid 75.26 71.32
VIT_06s0004g01780.t01 Wine grape cytosol 61.84 57.32
GSMUA_Achr5P22330_001 Banana cytosol 47.11 57.01
KRH23156 Soybean cytosol 57.37 56.48
KRH29689 Soybean cytosol 60.26 55.72
Solyc11g061720.1.1 Tomato cytosol 58.42 55.22
KRH24685 Soybean cytosol 59.74 54.18
PGSC0003DMT400054224 Potato cytosol 58.16 53.64
GSMUA_Achr7P02080_001 Banana cytosol, mitochondrion 49.47 47.47
TraesCS7A01G244900.1 Wheat cytosol 51.32 45.35
TraesCS7D01G243600.1 Wheat cytosol 50.79 45.2
TraesCS7B01G146500.1 Wheat cytosol 50.79 45.09
EER99080 Sorghum cytosol, nucleus, peroxisome 51.84 44.98
Os08t0504800-01 Rice cytosol 50.0 44.92
Zm00001d020927_P001 Maize cytosol 51.58 44.55
TraesCS5A01G263600.1 Wheat cytosol 51.32 44.42
TraesCS5B01G263000.1 Wheat cytosol 51.05 44.09
Zm00001d006017_P001 Maize cytosol 50.53 43.84
Os09t0486700-01 Rice cytosol 52.11 43.52
Zm00001d031426_P001 Maize cytosol 48.95 42.08
TraesCS7A01G426500.1 Wheat cytosol 14.74 41.79
EES15407 Sorghum cytosol 48.68 41.76
HORVU7Hr1G050240.1 Barley mitochondrion 51.32 41.49
TraesCS5D01G271200.1 Wheat cytosol 51.05 41.45
HORVU5Hr1G072930.1 Barley mitochondrion 49.74 40.65
TraesCS5A01G192800.1 Wheat cytosol 14.21 40.0
CDY27899 Canola cytosol 39.47 36.32
CDY00833 Canola cytosol 38.42 35.7
CDY68493 Canola cytosol 22.37 34.84
CDY71460 Canola cytosol 22.11 34.43
CDX99190 Canola cytosol 23.68 31.25
CDX77857 Canola cytosol 34.21 17.83
CDY58574 Canola cytosol 35.53 14.67
CDX88659 Canola cytosol 35.53 14.61
CDY62690 Canola cytosol 35.0 14.55
CDY43878 Canola cytosol 34.74 14.46
CDY02797 Canola cytosol 34.74 14.38
CDY32722 Canola cytosol 34.47 14.25
CDY30927 Canola cytosol 34.74 14.1
CDY70398 Canola nucleus, plastid 0.53 0.67
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.6.5Gene3D:3.30.200.20GO:A0A078G8R4UniProt:A0A078G8R4InterPro:AGC-kinase_C
EnsemblPlants:CDY22830ProteinID:CDY22830ProteinID:CDY22830.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00021177001InterPro:IPR000719InterPro:IPR000961InterPro:Kinase-like_dom_sfPFAM:PF00069
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS51285PANTHER:PTHR24351PANTHER:PTHR24351:SF107
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EEA529
SEG:seg:::::
Description
BnaA06g02470DBnaA06g02470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G8R4]
Coordinates
chrLK032136:-:372532..373674
Molecular Weight (calculated)
43115.5 Da
IEP (calculated)
9.064
GRAVY (calculated)
-0.432
Length
380 amino acids
Sequence
(BLAST)
001: METSATKLHL DQIRALKLLG KGATGTVFLV HDSVSDSSAS SPFALKLVDK ASASSLRRAK WETQILRRLS DEPNPFLPRL LATSESSEFF AWAMPYCSGG
101: DLNVLRHRQN DGVFSSSVIK FYLAEILCAL DHLHSMGIAY RDLKPENILL QESGHVTLTD FDLSCSLNKP TRPEFYLSDP EPDPKLKTSL RFFRQKKKTK
201: SARVNPITRR RMSFSGGERS NSFVGTDEYI SPEVIRGDGH DFAVDWWALG VLTYEMMYGA TPFKGRSKKE TFRNVLMKEP EFPGKPSDLT DLIRRLLVKD
301: PTRRLGFRRG AAEIKEHAFF RGVKWEILTE VLRPPFIPLR DDGESTENVT ASGFGVKEYF EKLRTPLPHE CPENNPFVDF
Best Arabidopsis Sequence Match ( AT1G51170.1 )
(BLAST)
001: METRPSSSSS LSPATNLNLD RLKVLKLLGK GATGTVFLVH DSVSDSSVSS PFALKLVDKS SASSLRRARW EIQILRRLSD DTNPNPFLPK LLASSESSEF
101: IAWALPYCSG GDLNVLRQRQ NDGVFSSSVI KFYLAEIVCA LDHLHTMGIA YRDLKPENIL LQESGHVTLT DFDLSCSLNK PTRPEFYHLS DPEPDPNPES
201: NLSHNKKSLR IFRQKKKKTK SARVNPITRR RLSFSGGERS NSFVGTDEYI SPEVIRGDGH DFAVDWWALG VLTYEMMYGE TPFKGRNKKE TFRNVLVKEP
301: EFAGKPSDLT DLIRRLLVKD PTKRFGFWRG AAEIKEHAFF KGVRWELLTE VLRPPFIPLR DDGDLTGKVT EESGFGIKEY FEKLKTPPLP LPHECSENNP
401: FVDF
Arabidopsis Description
UNCSerine/threonine-protein kinase UCN [Source:UniProtKB/Swiss-Prot;Acc:Q9SYB9]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.