Factsheet for TraesCS5D01G271200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G382800.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51170.1	TraesCS5A01G382800.2	AT4G14640.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G263600.1	Wheat	cytosol	91.88	97.95
TraesCS5B01G263000.1	Wheat	cytosol	91.24	97.05
HORVU5Hr1G072930.1	Barley	mitochondrion	90.17	90.75
EER99080	Sorghum	cytosol, nucleus, peroxisome	71.58	76.48
Zm00001d020927_P001	Maize	cytosol	71.79	76.36
Os09t0486700-01	Rice	cytosol	73.72	75.82
Zm00001d006017_P001	Maize	cytosol	69.02	73.74
TraesCS7D01G243600.1	Wheat	cytosol	58.33	63.93
GSMUA_Achr5P22330_001	Banana	cytosol	42.09	62.74
GSMUA_Achr7P02080_001	Banana	cytosol, mitochondrion	48.93	57.83
Bra018898.1-P	Field mustard	cytosol	33.76	55.05
KRH23156	Soybean	cytosol	44.23	53.63
KRH29689	Soybean	cytosol	45.94	52.31
VIT_06s0004g01780.t01	Wine grape	cytosol	45.73	52.2
CDY22830	Canola	cytosol, plastid	41.45	51.05
CDY25216	Canola	cytosol	41.24	50.79
PGSC0003DMT400054224	Potato	cytosol	44.66	50.73
KRH24685	Soybean	cytosol	45.3	50.6
Solyc11g061720.1.1	Tomato	cytosol	43.16	50.25
AT3G20830.1	Thale cress	cytosol, plastid	41.88	48.04
AT1G51170.1	Thale cress	plastid	41.24	47.77
CDY19600	Canola	plastid	41.03	47.64
CDY06386	Canola	nucleus, plastid	40.81	47.63
Bra035740.1-P	Field mustard	plastid	40.6	47.15
TraesCS6D01G197300.1	Wheat	plastid	35.47	38.25
TraesCS2D01G271600.1	Wheat	cytosol	29.91	15.66
TraesCS5D01G162400.1	Wheat	cytosol	30.34	15.35

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351
PANTHER:PTHR24351:SF167	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS5D01G271200	EnsemblPlants:TraesCS5D01G271200.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5D:+:374706796..374708202

Molecular Weight (calculated)

50799.9 Da

IEP (calculated)

8.474

GRAVY (calculated)

-0.353

Length

468 amino acids

Sequence
(BLAST)

001: MSTSSQAPSQ PDTHEPRRHA RLWRAIMQPA VGTGVMDIDL GAARAARVLG RGAMGTVFLV AAAGAEAEAG YALKVFDKRS HAAAPPGRAE DAARRARWEV
101: SVLSWLAHPH LPSLLGRAET PDLLAWAMPY CAGGDLNELR RAQPDRVFSP AAVRFYAAEL VSALADLHAA GIAYRDLKPE NVLLRADGHV TLTDFDLSRL
201: LPPKSPSAST CTSASSPCSS ATPSPTAPKP QGRHYRHLRR IFARSESSVA ASSGQEPHNL AWYLNRSDGG DDKLKKAKSA RASTPLSRGK NHASFRSAAS
301: GGVACERSFS FVGTEEYVAP EVVRGDGHEF SVDWWALGVL VYEMAFGRTP FRGRNRKETF RNVLLREPEF SADVGRRWPD LTDLIARLLD KDPARRLGFS
401: GGADEVRAHP FFAGVAWDLL GEVSRPPYIP PPADDIVACE GFGVVDYFQK LHQPPPQPDG SPESLPEF

Best Arabidopsis Sequence Match ( AT1G51170.1 )
(BLAST)

001: METRPSSSSS LSPATNLNLD RLKVLKLLGK GATGTVFLVH DSVSDSSVSS PFALKLVDKS SASSLRRARW EIQILRRLSD DTNPNPFLPK LLASSESSEF
101: IAWALPYCSG GDLNVLRQRQ NDGVFSSSVI KFYLAEIVCA LDHLHTMGIA YRDLKPENIL LQESGHVTLT DFDLSCSLNK PTRPEFYHLS DPEPDPNPES
201: NLSHNKKSLR IFRQKKKKTK SARVNPITRR RLSFSGGERS NSFVGTDEYI SPEVIRGDGH DFAVDWWALG VLTYEMMYGE TPFKGRNKKE TFRNVLVKEP
301: EFAGKPSDLT DLIRRLLVKD PTKRFGFWRG AAEIKEHAFF KGVRWELLTE VLRPPFIPLR DDGDLTGKVT EESGFGIKEY FEKLKTPPLP LPHECSENNP
401: FVDF

Arabidopsis Description

UNCSerine/threonine-protein kinase UCN [Source:UniProtKB/Swiss-Prot;Acc:Q9SYB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.