CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51170.1	KRH31638	AT4G14640.1	17360592
AT1G51170.1	KRH69070	AT4G14640.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24685	Soybean	cytosol	89.05	87.35
VIT_06s0004g01780.t01	Wine grape	cytosol	66.67	66.83
KRH23156	Soybean	cytosol	61.56	65.54
Bra018898.1-P	Field mustard	cytosol	44.53	63.76
CDY25216	Canola	cytosol	56.2	60.79
CDY22830	Canola	cytosol, plastid	55.72	60.26
AT3G20830.1	Thale cress	cytosol, plastid	58.39	58.82
GSMUA_Achr5P22330_001	Banana	cytosol	44.77	58.6
AT1G51170.1	Thale cress	plastid	56.69	57.67
PGSC0003DMT400054224	Potato	cytosol	57.66	57.52
CDY19600	Canola	plastid	55.96	57.07
CDY06386	Canola	nucleus, plastid	55.23	56.61
Bra035740.1-P	Field mustard	plastid	55.47	56.58
Solyc11g061720.1.1	Tomato	cytosol	55.23	56.47
GSMUA_Achr7P02080_001	Banana	cytosol, mitochondrion	50.61	52.53
Os08t0504800-01	Rice	cytosol	53.04	51.54
EER99080	Sorghum	cytosol, nucleus, peroxisome	53.53	50.23
Zm00001d020927_P001	Maize	cytosol	53.53	50.0
Zm00001d006017_P001	Maize	cytosol	52.07	48.86
TraesCS7A01G244900.1	Wheat	cytosol	51.09	48.84
TraesCS7D01G243600.1	Wheat	cytosol	50.61	48.71
TraesCS5A01G263600.1	Wheat	cytosol	51.82	48.52
TraesCS5B01G263000.1	Wheat	cytosol	51.58	48.18
TraesCS7B01G146500.1	Wheat	cytosol	50.12	48.13
Os09t0486700-01	Rice	cytosol	52.55	47.47
EES15407	Sorghum	cytosol	50.37	46.73
Zm00001d031426_P001	Maize	cytosol	49.63	46.15
TraesCS5D01G271200.1	Wheat	cytosol	52.31	45.94
HORVU5Hr1G072930.1	Barley	mitochondrion	50.85	44.95
HORVU7Hr1G050240.1	Barley	mitochondrion	50.85	44.47
KRH45318	Soybean	cytosol	18.0	41.11
TraesCS7A01G426500.1	Wheat	cytosol	12.65	38.81
TraesCS5A01G192800.1	Wheat	cytosol	12.41	37.78
KRH07383	Soybean	cytosol	38.69	36.64
KRH66186	Soybean	cytosol	37.47	35.32
KRH46605	Soybean	cytosol	36.5	33.71
KRH10351	Soybean	nucleus, plastid	35.04	14.97
KRH22966	Soybean	nucleus, plastid	34.79	14.56
KRH24973	Soybean	cytosol	33.58	14.12
KRH07591	Soybean	cytosol	33.82	14.04
KRH45326	Soybean	cytosol	15.82	7.97

Protein Annotations

EntrezGene:100782070	MapMan:18.4.6.5	EMBL:ACUP02006815	InterPro:AGC-kinase_C	EnsemblPlantsGene:GLYMA_11G131800	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
GO:GO:0035556	InterPro:IPR000719	InterPro:IPR000961	UniProt:K7LPJ4	EnsemblPlants:KRH29689	ProteinID:KRH29689
ProteinID:KRH29689.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS51285	PANTHER:PTHR24351	PANTHER:PTHR24351:SF107	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001BA5887	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr11:-:10083308..10084893

Molecular Weight (calculated)

46526.8 Da

IEP (calculated)

10.040

GRAVY (calculated)

-0.493

Length

411 amino acids

Sequence
(BLAST)

001: MDSATTAPPP SQELDLDNLK LLKVLGKGAM GTVFLVQDTT NTPFALKVVD KTCVHAKLDA ERRARWEIQV LSTLSHPFLP SLMGTLESPQ FLAWALPYCP
101: GGDLNFLRYR QTDRSFSPAV IRFYVAEILC ALDHLHSMGI AYRDLKPENV LVQNTGHVTL TDFDLSRKLN PKPKPNPNPV IVPSIPLPNS NVPQPRRKHR
201: RNLSRWISFF PPDGTNNNNK NGLKKAKSAQ VSPVSRRKPS FSSGERSNSF VGTEEYVSPE VVRGDGHEFA VDWWALGILI YEMLYGKTPF KGRNRKETFR
301: NVIMKPPEFV GKRTALTNLI ERLLEKDPTK RLGYTRGAAE IKEHEFFRGV QWELLTEVVR PPFIPSGDDG AGEMTERFSD RNCGVNIRDY FQNLKSSPSG
401: RFEKNVSLRE F

Best Arabidopsis Sequence Match ( AT1G51170.1 )
(BLAST)

001: METRPSSSSS LSPATNLNLD RLKVLKLLGK GATGTVFLVH DSVSDSSVSS PFALKLVDKS SASSLRRARW EIQILRRLSD DTNPNPFLPK LLASSESSEF
101: IAWALPYCSG GDLNVLRQRQ NDGVFSSSVI KFYLAEIVCA LDHLHTMGIA YRDLKPENIL LQESGHVTLT DFDLSCSLNK PTRPEFYHLS DPEPDPNPES
201: NLSHNKKSLR IFRQKKKKTK SARVNPITRR RLSFSGGERS NSFVGTDEYI SPEVIRGDGH DFAVDWWALG VLTYEMMYGE TPFKGRNKKE TFRNVLVKEP
301: EFAGKPSDLT DLIRRLLVKD PTKRFGFWRG AAEIKEHAFF KGVRWELLTE VLRPPFIPLR DDGDLTGKVT EESGFGIKEY FEKLKTPPLP LPHECSENNP
401: FVDF

Arabidopsis Description

UNCSerine/threonine-protein kinase UCN [Source:UniProtKB/Swiss-Prot;Acc:Q9SYB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.