Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS5A01G382800.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G51170.1 | TraesCS5A01G382800.2 | AT4G14640.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G263000.1 | Wheat | cytosol | 97.04 | 96.82 |
| TraesCS5D01G271200.1 | Wheat | cytosol | 97.95 | 91.88 |
| HORVU5Hr1G072930.1 | Barley | mitochondrion | 93.62 | 88.39 |
| Zm00001d020927_P001 | Maize | cytosol | 76.31 | 76.14 |
| EER99080 | Sorghum | cytosol, nucleus, peroxisome | 75.85 | 76.03 |
| Os09t0486700-01 | Rice | cytosol | 77.68 | 74.95 |
| Zm00001d006017_P001 | Maize | cytosol | 72.89 | 73.06 |
| TraesCS7A01G244900.1 | Wheat | cytosol | 62.19 | 63.49 |
| GSMUA_Achr5P22330_001 | Banana | cytosol | 44.65 | 62.42 |
| TraesCS5A01G192800.1 | Wheat | cytosol | 18.45 | 60.0 |
| TraesCS7A01G426500.1 | Wheat | cytosol | 18.22 | 59.7 |
| GSMUA_Achr7P02080_001 | Banana | cytosol, mitochondrion | 51.25 | 56.82 |
| Bra018898.1-P | Field mustard | cytosol | 36.22 | 55.4 |
| KRH23156 | Soybean | cytosol | 47.15 | 53.63 |
| VIT_06s0004g01780.t01 | Wine grape | cytosol | 48.52 | 51.95 |
| KRH29689 | Soybean | cytosol | 48.52 | 51.82 |
| CDY22830 | Canola | cytosol, plastid | 44.42 | 51.32 |
| CDY25216 | Canola | cytosol | 44.19 | 51.05 |
| PGSC0003DMT400054224 | Potato | cytosol | 47.38 | 50.49 |
| KRH24685 | Soybean | cytosol | 47.84 | 50.12 |
| Solyc11g061720.1.1 | Tomato | cytosol | 45.79 | 50.0 |
| AT3G20830.1 | Thale cress | cytosol, plastid | 44.87 | 48.28 |
| AT1G51170.1 | Thale cress | plastid | 44.19 | 48.02 |
| CDY19600 | Canola | plastid | 43.96 | 47.89 |
| CDY06386 | Canola | nucleus, plastid | 43.74 | 47.88 |
| Bra035740.1-P | Field mustard | plastid | 43.51 | 47.39 |
| TraesCS6A01G214800.1 | Wheat | cytosol | 36.45 | 36.95 |
| TraesCS2A01G347400.1 | Wheat | cytosol | 37.59 | 36.1 |
| TraesCS2A01G272400.1 | Wheat | cytosol | 30.3 | 14.93 |
| TraesCS5A01G157000.1 | Wheat | cytosol | 30.52 | 14.57 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.6.5 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf |
| PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24351 | PANTHER:PTHR24351:SF167 |
| InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS5A01G263600 |
| EnsemblPlants:TraesCS5A01G263600.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:476413199..476414518
Molecular Weight (calculated)
47534.1 Da
IEP (calculated)
8.467
GRAVY (calculated)
-0.320
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPAVGTGVV DIDLGAARAA RVLGRGAMGT VFLVAAEAEA GYALKVFDKR SHAAAPPGRA EDATRRARWE VSVLSRLAHP HLPSLLGRAE TPDLLAWAMP
101: YCAGGDLNEL RRAQPDRVFS PAAVRFYAAE LVSALADLHA AGIAYRDLKP ENVLLRADGH VTLTDFDLSR LLQPKSPSAS TCTSASSPCS SATPSPTAPK
201: PQGRQYRHLR RIFARSESSV AASSGQEPHN LAWYLNRSDG GVDKLKKAKS ARASTPLGRG KNHASFRSAA SGGGACERSF SFVGTEEYVA PEVVRGDGHE
301: FSVDWWALGV LVYEMAFGRT PFRGRNRKET FRNVLLREPE FSADVGRRWP DLTDLIARLL DKDPARRLGF SGGADEVRAH PFFAGVAWDL LGEVSRPPYI
401: PPPADDIVTC EGFGVVDYFQ KLHQPPPQPD GSPESLPEF
101: YCAGGDLNEL RRAQPDRVFS PAAVRFYAAE LVSALADLHA AGIAYRDLKP ENVLLRADGH VTLTDFDLSR LLQPKSPSAS TCTSASSPCS SATPSPTAPK
201: PQGRQYRHLR RIFARSESSV AASSGQEPHN LAWYLNRSDG GVDKLKKAKS ARASTPLGRG KNHASFRSAA SGGGACERSF SFVGTEEYVA PEVVRGDGHE
301: FSVDWWALGV LVYEMAFGRT PFRGRNRKET FRNVLLREPE FSADVGRRWP DLTDLIARLL DKDPARRLGF SGGADEVRAH PFFAGVAWDL LGEVSRPPYI
401: PPPADDIVTC EGFGVVDYFQ KLHQPPPQPD GSPESLPEF
001: METRPSSSSS LSPATNLNLD RLKVLKLLGK GATGTVFLVH DSVSDSSVSS PFALKLVDKS SASSLRRARW EIQILRRLSD DTNPNPFLPK LLASSESSEF
101: IAWALPYCSG GDLNVLRQRQ NDGVFSSSVI KFYLAEIVCA LDHLHTMGIA YRDLKPENIL LQESGHVTLT DFDLSCSLNK PTRPEFYHLS DPEPDPNPES
201: NLSHNKKSLR IFRQKKKKTK SARVNPITRR RLSFSGGERS NSFVGTDEYI SPEVIRGDGH DFAVDWWALG VLTYEMMYGE TPFKGRNKKE TFRNVLVKEP
301: EFAGKPSDLT DLIRRLLVKD PTKRFGFWRG AAEIKEHAFF KGVRWELLTE VLRPPFIPLR DDGDLTGKVT EESGFGIKEY FEKLKTPPLP LPHECSENNP
401: FVDF
101: IAWALPYCSG GDLNVLRQRQ NDGVFSSSVI KFYLAEIVCA LDHLHTMGIA YRDLKPENIL LQESGHVTLT DFDLSCSLNK PTRPEFYHLS DPEPDPNPES
201: NLSHNKKSLR IFRQKKKKTK SARVNPITRR RLSFSGGERS NSFVGTDEYI SPEVIRGDGH DFAVDWWALG VLTYEMMYGE TPFKGRNKKE TFRNVLVKEP
301: EFAGKPSDLT DLIRRLLVKD PTKRFGFWRG AAEIKEHAFF KGVRWELLTE VLRPPFIPLR DDGDLTGKVT EESGFGIKEY FEKLKTPPLP LPHECSENNP
401: FVDF
Arabidopsis Description
UNCSerine/threonine-protein kinase UCN [Source:UniProtKB/Swiss-Prot;Acc:Q9SYB9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.