CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG37587
KXG37588

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51170.1	KXG37587	AT4G14640.1	17360592
AT1G51170.1	KXG37588	AT4G14640.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020927_P001	Maize	cytosol	91.55	91.14
Zm00001d006017_P001	Maize	cytosol	87.67	87.67
TraesCS5A01G263600.1	Wheat	cytosol	76.03	75.85
TraesCS5B01G263000.1	Wheat	cytosol	76.03	75.68
Os09t0486700-01	Rice	cytosol	76.26	73.41
TraesCS5D01G271200.1	Wheat	cytosol	76.48	71.58
HORVU5Hr1G072930.1	Barley	mitochondrion	74.43	70.11
GSMUA_Achr5P22330_001	Banana	cytosol	44.52	62.1
EES15407	Sorghum	cytosol	59.82	59.14
GSMUA_Achr7P02080_001	Banana	cytosol, mitochondrion	50.0	55.3
Bra018898.1-P	Field mustard	cytosol	36.07	55.05
VIT_06s0004g01780.t01	Wine grape	cytosol	50.46	53.9
KRH23156	Soybean	cytosol	47.49	53.89
KRH29689	Soybean	cytosol	50.23	53.53
KRH24685	Soybean	cytosol	49.77	52.03
CDY22830	Canola	cytosol, plastid	44.98	51.84
CDY25216	Canola	cytosol	44.98	51.84
PGSC0003DMT400054224	Potato	cytosol	47.72	50.73
AT3G20830.1	Thale cress	cytosol, plastid	46.8	50.25
Solyc11g061720.1.1	Tomato	cytosol	45.89	50.0
CDY19600	Canola	plastid	45.89	49.88
CDY06386	Canola	nucleus, plastid	45.43	49.63
Bra035740.1-P	Field mustard	plastid	45.43	49.38
AT1G51170.1	Thale cress	plastid	44.98	48.76
EES11030	Sorghum	cytosol	39.04	37.09
EES07111	Sorghum	plastid	35.62	31.33
EES15492	Sorghum	cytosol	31.96	15.33
EES14872	Sorghum	cytosol	29.91	14.72

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	UniProt:C5X3V0	EnsemblPlants:EER99080	ProteinID:EER99080	ProteinID:EER99080.2
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	GO:GO:0061630	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF167	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3002G245900	SUPFAM:SSF56112	unigene:Sbi.11478	InterPro:Ser/Thr_kinase_AS
UniParc:UPI00081AC99E	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:63422139..63423455

Molecular Weight (calculated)

47962.6 Da

IEP (calculated)

6.518

GRAVY (calculated)

-0.307

Length

438 amino acids

Sequence
(BLAST)

001: MPVTPTMEID LHDVRAARVL GRGAMGTVFL AVDGAASSGE AYALKVFDKR SPAASRPAAG ADAARRARWE VSVLSRLAHP HLPSLLGCAE TPDLLAWALP
101: YCPGGDLNEL RHAQPDRVFS PAAIRFYVAE VVSALAELHA TGIAYRDLKP ENVLLRADGH VMLTDFDLSR QLPPRSPAAS TSTSTSSSCS ATSSPPPPQA
201: QSHRRLKNIF KRSESAVTAS TSGQEEEPRN LAWYLDRSIE GGVDQIKKAK SARVSPMERA KKLSSFLSAA AGERSFSFVG TEEYVAPEVV RGDGHEFAVD
301: WWALGVLVYE MCHGRTPFRG RNRKETFRNV LLREPEFTAD ARRRWPELTD LIARLLEKDP SRRLGFAGGA DEVRAHPFFA GVAWDLLGEV SRPPYIPAPA
401: DDIVSCDGFS VVEYFDKLHQ PPLSPAEHSP EDDLLPEF

Best Arabidopsis Sequence Match ( AT3G20830.1 )
(BLAST)

001: MEPSPSSPPS SPPEILDLDS IKALKILGKG ATGTVFLAHD VVSTSSSSSP FAVKLVPKSS ASSLRRARWE IEVLRRLSVD SNQNPFLPRL LASFESPEYF
101: AWAVPYCSGG DLNVLLHRQN DGVFSSSVIR FYVAEIVCAL EHLHTMGIAY RDLKPENILI QQSGHVTLTD FDLSRSLKKP LRPHFYQPDP ELIIDRKKSR
201: SFSRLISPTA EKNKTGLKKT RSARVNPINR RKTSFSSGER SNSFVGTDEY VSPEVIRGDG HDFAVDWWAL GVLTYEMMYG ETPFKGKSKK ETFRNVLMKE
301: PEFAGKPNDL TDLIRRLLVK DPNRRLGCHR GAAEIKELAF FAGVRWDLLT EVLRPPFIPL RDDGELTVGG FDIREHFEKL RTTPSSAPPS PLRSPPHVCR
401: KNDPFIEF

Arabidopsis Description

UCNLSerine/threonine-protein kinase UCNL [Source:UniProtKB/Swiss-Prot;Acc:Q9LT38]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.