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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • plasma membrane 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d032353_P001 Maize cytosol 92.02 87.88
Os04t0304200-01 Rice plasma membrane 71.12 82.1
TraesCS2D01G271600.1 Wheat cytosol 80.11 79.75
TraesCS2B01G290500.1 Wheat cytosol 80.11 79.75
TraesCS2A01G272400.1 Wheat cytosol 79.44 79.35
KRH45318 Soybean cytosol 13.48 66.67
GSMUA_Achr8P25430_001 Banana cytosol 68.09 65.02
Bra020388.1-P Field mustard cytosol 63.15 63.79
CDY32722 Canola cytosol 64.72 62.68
CDY02797 Canola cytosol 64.49 62.53
Bra002669.1-P Field mustard cytosol 61.91 62.47
CDY62690 Canola cytosol 63.71 62.03
Solyc01g097770.2.1 Tomato plastid 66.4 61.88
CDY43878 Canola cytosol 63.48 61.88
AT5G58140.2 Thale cress cytosol 63.48 61.75
CDY58574 Canola cytosol 63.15 61.09
VIT_03s0038g04210.t01 Wine grape cytosol 68.43 60.84
CDX88659 Canola cytosol 62.58 60.28
Bra006782.1-P Field mustard cytosol 60.9 60.09
KRH07591 Soybean cytosol 66.29 59.6
KRH45326 Soybean cytosol 52.7 57.48
EES15492 Sorghum cytosol 55.73 54.33
EER99080 Sorghum cytosol, nucleus, peroxisome 14.72 29.91
EES11030 Sorghum cytosol 15.28 29.5
EES15407 Sorghum cytosol 14.04 28.22
EES07111 Sorghum plastid 15.39 27.51
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.6.5MapMan:20.5.1MapMan:26.1.2.2.1Gene3D:3.30.200.20Gene3D:3.30.450.20
EntrezGene:8069866UniProt:C5YK68EnsemblPlants:EES14872ProteinID:EES14872ProteinID:EES14872.1GO:GO:0000155
GO:GO:0000160GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674
GO:GO:0004871GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005794GO:GO:0005886GO:GO:0006464
GO:GO:0006468GO:GO:0006810GO:GO:0007154GO:GO:0007165GO:GO:0007623GO:GO:0008150
GO:GO:0008152GO:GO:0009605GO:GO:0009606GO:GO:0009628GO:GO:0009637GO:GO:0009638
GO:GO:0009719GO:GO:0009735GO:GO:0009785GO:GO:0009882GO:GO:0009987GO:GO:0010118
GO:GO:0010181GO:GO:0010362GO:GO:0016020GO:GO:0016301GO:GO:0016740GO:GO:0019538
GO:GO:0023014GO:GO:0035556GO:GO:0038023GO:GO:0042802InterPro:IPR000014InterPro:IPR000700
InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:PACInterPro:PASInterPro:PAS-assoc_CInterPro:PAS-like_dom_sf
PFAM:PF00069PFAM:PF13426ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50112
PFscan:PS50113PANTHER:PTHR24351PANTHER:PTHR24351:SF173InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00086
SMART:SM00091SMART:SM00220EnsemblPlantsGene:SORBI_3007G105500SUPFAM:SSF55785SUPFAM:SSF56112unigene:Sbi.12287
InterPro:Ser/Thr_kinase_ASTIGRFAMs:TIGR00229UniParc:UPI0001A8791DRefSeq:XP_002445377.1SEG:seg:
Description
hypothetical protein
Coordinates
chr7:-:37601166..37615208
Molecular Weight (calculated)
99936.2 Da
IEP (calculated)
7.480
GRAVY (calculated)
-0.507
Length
890 amino acids
Sequence
(BLAST)
001: MAGSSREAAE KVEKWMAFPS GSDAGGFTFP QPRSVSGGGK EIVEEEASSS STVGGAGNGN GNRQASFQRD SGVAGSTKSS RGSGDSLPRV SRELKDALSS
101: LQQTFVVSDA TRPDCPIIYA SAGFYTMTGY AAKDVVGRNC RFLQGPDTDM DEVAKIRDAV KTGRSFCGRL LNYRKDGTPF WNMLTVTPIR DDNGKVIKFI
201: GMQVEVSKYT EGLSEKRMRP NEMPVSLIHY DDRQKETAMS SITEVVQTVK HPRARSEGEQ EPVEPAPLVT APPLVAPGTP LWDVKKEDSR LSRKMSRRRS
301: SLMGFKMGKR SSIGSKEAVP AEVEATSPAP APATPESATE KERKNSWEKE GRERDIRQGI DLATTLERIE KNFVITDPRL PDNPIIFASD SFLELTEYTR
401: EEILGRNCRF LQGAETDMST VDKIREAIRE QKEITVQLIN YTKSGKKFWN LFHLQPMRDQ KGELQYFIGV QLDGSDHVEP LRNRLSENTE LQSAKLVKAT
501: AENVDEAVRE LPDPNLRPED LWDIYSKYVS PKPHRRYNSS WIAIEKITKS GEKIGLKHFK PIKPLGCGDT GSVHLVELQG SGELFAMKAM DKSVMLNRNK
601: VHRVCIEREI YSLLDHPFLP TLYTSFQTPT HVCLITDFCP GGELFALLDM QPMKLFREES ARFYAAEVVI GLEYLHFLGI IYRDLKPENI LLQEDGHIVL
701: TDFDLSFLTS SKPHVIKHST SRRRRSKEYL PPSFVSEPAT PSNSFVGTEE YIAPEIITGA PHTSAIDWWA LGILLYEMLY GRTPFRGKNR KRTFHNILHK
801: DLTFPSSIPV SLAAKQLIHG LLQRDPSSRL GSSAGANDIK QHPFFKDIYW PLIRCMEPPE LDVPLKLTRK EPELTVKPEE DTHAQILDTF
Best Arabidopsis Sequence Match ( AT5G58140.1 )
(BLAST)
001: MERPRAPPSP LNDAESLSER RSLEIFNPSS GKETHGSTSS SSKPPLDGNN KGSSSKWMEF QDSAKITERT AEWGLSAVKP DSGDDGISFK LSSEVERSKN
101: MSRRSSEEST SSESGAFPRV SQELKTALST LQQTFVVSDA TQPHCPIVYA SSGFFTMTGY SSKEIVGRNC RFLQGPDTDK NEVAKIRDCV KNGKSYCGRL
201: LNYKKDGTPF WNLLTVTPIK DDQGNTIKFI GMQVEVSKYT EGVNDKALRP NGLSKSLIRY DARQKEKALD SITEVVQTIR HRKSQVQESV SNDTMVKPDS
301: STTPTPGRQT RQSDEASKSF RTPGRVSTPT GSKLKSSNNR HEDLLRMEPE ELMLSTEVIG QRDSWDLSDR ERDIRQGIDL ATTLERIEKN FVISDPRLPD
401: NPIIFASDSF LELTEYSREE ILGRNCRFLQ GPETDQATVQ KIRDAIRDQR EITVQLINYT KSGKKFWNLF HLQPMRDQKG ELQYFIGVQL DGSDHVEPLQ
501: NRLSERTEMQ SSKLVKATAT NVDEAVRELP DANTRPEDLW AAHSKPVYPL PHNKESTSWK AIKKIQASGE TVGLHHFKPI KPLGSGDTGS VHLVELKGTG
601: ELYAMKAMEK TMMLNRNKAH RACIEREIIS LLDHPFLPTL YASFQTSTHV CLITDFCPGG ELFALLDRQP MKILTEDSAR FYAAEVVIGL EYLHCLGIVY
701: RDLKPENILL KKDGHIVLAD FDLSFMTTCT PQLIIPAAPS KRRRSKSQPL PTFVAEPSTQ SNSFVGTEEY IAPEIITGAG HTSAIDWWAL GILLYEMLYG
801: RTPFRGKNRQ KTFANILHKD LTFPSSIPVS LVGRQLINTL LNRDPSSRLG SKGGANEIKQ HAFFRGINWP LIRGMSPPPL DAPLSIIEKD PNAKDIKWED
901: DGVLVNSTDL DIDLF
Arabidopsis Description
PHOT2Phototropin-2 [Source:UniProtKB/Swiss-Prot;Acc:P93025]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.