Factsheet for Os04t0304200-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
vacuole 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, vacuole
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	cytosol

plasma membrane: 18557835
extracellular: 21255809
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18557835 doi

SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis

Department of Biology Area 9, University of York, York YO10 5DD, UK.

msms PMID: 21255809 doi

T Shinano, S Komatsu, T Yoshimura, S Tokutake, FJ Kong, T Watanabe, J Wasaki, M Osaki

National Agriculture and Food Research Organization, National Agricultural Research Center for Hokkaido Region, 1-Hitsujigaoka, Toyohira-ku, Sapporo 062-8555, Japan. shinano@affrc.go.jp

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G271600.1	Wheat	cytosol	86.64	74.72
TraesCS2B01G290500.1	Wheat	cytosol	86.64	74.72
TraesCS2A01G272400.1	Wheat	cytosol	85.86	74.3
KRH45318	Soybean	cytosol	16.73	71.67
EES14872	Sorghum	cytosol	82.1	71.12
Zm00001d032353_P001	Maize	cytosol	82.1	67.92
GSMUA_Achr8P25430_001	Banana	cytosol	73.02	60.41
Os12t0101800-02	Rice	mitochondrion	51.49	59.43
CDY43878	Canola	cytosol	69.13	58.38
CDY62690	Canola	cytosol	69.13	58.32
Bra002669.1-P	Field mustard	cytosol	66.67	58.28
Bra020388.1-P	Field mustard	cytosol	66.54	58.23
Solyc01g097770.2.1	Tomato	plastid	71.98	58.12
CDY58574	Canola	cytosol	68.87	57.72
AT5G58140.2	Thale cress	cytosol	68.48	57.7
CDY32722	Canola	cytosol	68.61	57.56
CDY02797	Canola	cytosol	68.35	57.41
CDX88659	Canola	cytosol	68.48	57.14
VIT_03s0038g04210.t01	Wine grape	cytosol	73.41	56.54
Bra006782.1-P	Field mustard	cytosol	66.02	56.43
KRH07591	Soybean	cytosol	71.72	55.86
KRH45326	Soybean	cytosol	54.99	51.96
Os11t0102200-00	Rice	cytosol, plasma membrane, plastid	58.75	49.19
Os08t0504800-01	Rice	cytosol	17.38	31.68
Os04t0488700-01	Rice	cytosol	17.38	29.0
Os09t0486700-01	Rice	cytosol	16.86	28.57
Os02t0603000-00	Rice	cytosol, endoplasmic reticulum, plastid	16.34	28.19
Os11t0102500-01	Rice	cytosol	0.52	13.33

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	MapMan:20.5.1	MapMan:26.1.2.2.1	Gene3D:3.30.200.20	Gene3D:3.30.450.20
UniProt:A0A0P0W8S4	ProteinID:BAS88477.1	GO:GO:0000155	GO:GO:0000160	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005794	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0006810	GO:GO:0007154
GO:GO:0007165	GO:GO:0007623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009606
GO:GO:0009628	GO:GO:0009637	GO:GO:0009638	GO:GO:0009719	GO:GO:0009735	GO:GO:0009785
GO:GO:0009881	GO:GO:0009882	GO:GO:0009987	GO:GO:0010118	GO:GO:0010181	GO:GO:0010362
GO:GO:0016020	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0018298	GO:GO:0019538
GO:GO:0023014	GO:GO:0035556	GO:GO:0038023	GO:GO:0042802	GO:GO:0050896	InterPro:IPR000014
InterPro:IPR000700	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os04g0304200	EnsemblPlants:Os04t0304200-01	InterPro:PAC
InterPro:PAS	InterPro:PAS-assoc_C	InterPro:PAS-like_dom_sf	PFAM:PF00069	PFAM:PF13426	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50112	PFscan:PS50113	PANTHER:PTHR24351	PANTHER:PTHR24351:SF173
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00086	SMART:SM00220	SUPFAM:SSF55785	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	TIGRFAMs:TIGR00229	UniParc:UPI0000DD8FDD	SEG:seg	:	:

Description

Similar to Nonphototropic hypocotyl protein 1 (EC 2.7.1.37) (Phototropin). (Os04t0304200-01)

Coordinates

chr4:-:13641661..13654849

Molecular Weight (calculated)

86411.8 Da

IEP (calculated)

8.386

GRAVY (calculated)

-0.422

Length

771 amino acids

Sequence
(BLAST)

001: VLCRFLQGPD TDAAEVAKIR DAVKHGRSFC GRLLNYRKDG APFWNLLTVT PIRDDNGKVI KFIGMQVEVS KYTEGLSDKR MRPNELPVSL IRYDERQKDK
101: AMSSMTEVVQ TVKQPRGARA PADAALLTPP KMSDADKMAA MSPVVAPGTP SGGGGGAGSF KSPLWDLKKE ESRLSRLASG RKSGRSSLMG FKIGKRSSVG
201: SREAPAVVEE PAPAPPPAPE VVERTDSWER AEREKDIRQG IDLATTLERI EKNFVITDPR IPDNPIIFAS DSFLELTEYT REEILGRNCR FLQGPETDQG
301: TVDKIREAIR EQKEITVQLI NYTKSGKKFW NLFHLQPMRD QKGELQYFIG VQLDGSDHVE PLRNRLSENT EIQSAKLVKA TAENVDDAVR ELPDANLRPE
401: DLWAIHSMRV SPKPHKRNNP SWIAIEKATN LGEKIGLKHF KPVKPLGCGD TGSVHLVELQ GSGELFAMKA MDKSVMLNRN KVHRACIERE IYALLDHPFL
501: PTLYTSFQTP THVCLITDFC PGGELFAVLD RQPMKIFREE CARFYAAEVV IGLEYLHCLG IIYRDLKPEN ILLQADGHIV LTDFDLSFLT TSKPHVIKNS
601: TSLKRRRSQE FLPPTFVSEP STPSNSFVGT EEYIAPEVIT GAGHTSAIDW WALGILLYEM LYGRTPFRGK NRKKTFYNIL HKDLTFPSSI PVSLAAKQLI
701: HGLLQRDPSN RIGSNAGAND IKQHSFFQDI NWPLIRCMSP PELDVPLKLI GKETQPKAKP DEDVPLNLDT F

Best Arabidopsis Sequence Match ( AT5G58140.1 )
(BLAST)

001: MERPRAPPSP LNDAESLSER RSLEIFNPSS GKETHGSTSS SSKPPLDGNN KGSSSKWMEF QDSAKITERT AEWGLSAVKP DSGDDGISFK LSSEVERSKN
101: MSRRSSEEST SSESGAFPRV SQELKTALST LQQTFVVSDA TQPHCPIVYA SSGFFTMTGY SSKEIVGRNC RFLQGPDTDK NEVAKIRDCV KNGKSYCGRL
201: LNYKKDGTPF WNLLTVTPIK DDQGNTIKFI GMQVEVSKYT EGVNDKALRP NGLSKSLIRY DARQKEKALD SITEVVQTIR HRKSQVQESV SNDTMVKPDS
301: STTPTPGRQT RQSDEASKSF RTPGRVSTPT GSKLKSSNNR HEDLLRMEPE ELMLSTEVIG QRDSWDLSDR ERDIRQGIDL ATTLERIEKN FVISDPRLPD
401: NPIIFASDSF LELTEYSREE ILGRNCRFLQ GPETDQATVQ KIRDAIRDQR EITVQLINYT KSGKKFWNLF HLQPMRDQKG ELQYFIGVQL DGSDHVEPLQ
501: NRLSERTEMQ SSKLVKATAT NVDEAVRELP DANTRPEDLW AAHSKPVYPL PHNKESTSWK AIKKIQASGE TVGLHHFKPI KPLGSGDTGS VHLVELKGTG
601: ELYAMKAMEK TMMLNRNKAH RACIEREIIS LLDHPFLPTL YASFQTSTHV CLITDFCPGG ELFALLDRQP MKILTEDSAR FYAAEVVIGL EYLHCLGIVY
701: RDLKPENILL KKDGHIVLAD FDLSFMTTCT PQLIIPAAPS KRRRSKSQPL PTFVAEPSTQ SNSFVGTEEY IAPEIITGAG HTSAIDWWAL GILLYEMLYG
801: RTPFRGKNRQ KTFANILHKD LTFPSSIPVS LVGRQLINTL LNRDPSSRLG SKGGANEIKQ HAFFRGINWP LIRGMSPPPL DAPLSIIEKD PNAKDIKWED
901: DGVLVNSTDL DIDLF

Arabidopsis Description

PHOT2Phototropin-2 [Source:UniProtKB/Swiss-Prot;Acc:P93025]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.