Factsheet for Bra020388.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32722	Canola	cytosol	99.09	94.99
Bra002669.1-P	Field mustard	cytosol	91.15	91.04
Bra006782.1-P	Field mustard	cytosol	90.69	88.58
AT5G58140.2	Thale cress	cytosol	90.58	87.21
KRH45318	Soybean	cytosol	15.89	77.78
Os04t0304200-01	Rice	plasma membrane	58.23	66.54
Solyc01g097770.2.1	Tomato	plastid	72.08	66.49
KRH07591	Soybean	cytosol	73.55	65.45
VIT_03s0038g04210.t01	Wine grape	cytosol	72.87	64.14
TraesCS2B01G290500.1	Wheat	cytosol	64.36	63.42
TraesCS2A01G272400.1	Wheat	cytosol	64.13	63.41
EES14872	Sorghum	cytosol	63.79	63.15
TraesCS2D01G271600.1	Wheat	cytosol	64.02	63.09
GSMUA_Achr8P25430_001	Banana	cytosol	66.52	62.88
KRH45326	Soybean	cytosol	57.55	62.13
Zm00001d032353_P001	Maize	cytosol	63.34	59.87
Bra019474.1-P	Field mustard	nucleus, plastid	56.07	51.3
Bra033907.1-P	Field mustard	cytosol	8.06	44.65
Bra018898.1-P	Field mustard	cytosol	11.8	36.24
Bra035740.1-P	Field mustard	plastid	15.32	33.5
Bra015120.1-P	Field mustard	cytosol	15.1	32.13

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	MapMan:20.5.1	MapMan:26.1.2.2.1	Gene3D:3.30.200.20	Gene3D:3.30.450.20
EnsemblPlantsGene:Bra020388	EnsemblPlants:Bra020388.1	EnsemblPlants:Bra020388.1-P	GO:GO:0000155	GO:GO:0000160	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0023014	GO:GO:0038023	InterPro:IPR000014	InterPro:IPR000700	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M4DV45	InterPro:PAC	InterPro:PAS	InterPro:PAS-assoc_C	InterPro:PAS-like_dom_sf
PFAM:PF00069	PFAM:PF13426	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50112
PFscan:PS50113	PANTHER:PTHR24351	PANTHER:PTHR24351:SF173	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00086
SMART:SM00091	SMART:SM00220	SUPFAM:SSF55785	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGRFAMs:TIGR00229
UniParc:UPI000254306F	SEG:seg	:	:	:	:

Description

AT5G58140 (E=8e-248) PHOT2, NPL1 | PHOT2 (PHOTOTROPIN 2); FMN binding / blue light photoreceptor/ kinase/ protein serine/threonine kinase

Coordinates

chrA02:-:6512671..6517209

Molecular Weight (calculated)

98826.7 Da

IEP (calculated)

6.830

GRAVY (calculated)

-0.487

Length

881 amino acids

Sequence
(BLAST)

001: MERPRASPSP LADLEPLSER TSLEIFNPSS GKEASSSSSS KPQDGNRKGS SSKWMEFHDS AKIVERTAEW GLSSVKPDTG EDGISFKVSS EVERSKMSRR
101: SSEESSASES GAFPRVSQEL KTALSTLQQT FVVSDATQPD CPIVYASSGF FTMTGYSSKE IVGRNCRFLQ GPDTDKKEVV KIRDCVKNGK SYCGRLLNYK
201: KDGTPFWNLL TVTPIKDDQG NTIKFIGMQV EVSKYTEGVN DKELRPNGLS KSLIRYDVRQ KELALDSITE VVQTIKHRKS QVRNSVSNDI LVKPDSTTTP
301: GGQVVRSDEA SKSARTPGRV ATPARPKSKS LSWNKRHEDV PSVEPEELML STEVVEPRES WERLERERDI RQGIDLATTL ERIEKNFVIS DPRLPDNPII
401: FASDSFLELT EYTREEILGR NCRFLQGPET DQATVQKIRD AIREQREITV QLINYTKSGK KFWNLFHLQP MRDQKGELQY FIGVQLDGSD HVEPLRNRLS
501: ERTEMQSSKL VKATATNVDE AVRELPDANM IQASGETIGL HHFKPIKPLG SGDTGSVHLV ELKGTGELYA MKAMEKTMML NRNKAHRACI EREIISLLDH
601: PFLPTLYTSF QTSTHVCLIT DFCPGGELFA LLDIQPMKFL SEESARFYAA EVVIGLEYLH CLGIVYRDLK PENILLKKDG HIVLADFDLS FLTSCTPQLI
701: VPPAPNKRRR SKSQPLPTFV AEPATQSNSF VGTEEYIAPE IITGSGHTSA IDWWALGILL YEMLYGRTPF RGKNRQKTFA NILHKDLTFP SSIPVSLVCR
801: QLINMLLNRD PSSRLGSKGG ANEIKQHAFF CGINWPLIRG TEPPPLDAPL RITEKDPNAK DIKWEDDGVL VNSMDIDIDL F

Best Arabidopsis Sequence Match ( AT5G58140.1 )
(BLAST)

001: MERPRAPPSP LNDAESLSER RSLEIFNPSS GKETHGSTSS SSKPPLDGNN KGSSSKWMEF QDSAKITERT AEWGLSAVKP DSGDDGISFK LSSEVERSKN
101: MSRRSSEEST SSESGAFPRV SQELKTALST LQQTFVVSDA TQPHCPIVYA SSGFFTMTGY SSKEIVGRNC RFLQGPDTDK NEVAKIRDCV KNGKSYCGRL
201: LNYKKDGTPF WNLLTVTPIK DDQGNTIKFI GMQVEVSKYT EGVNDKALRP NGLSKSLIRY DARQKEKALD SITEVVQTIR HRKSQVQESV SNDTMVKPDS
301: STTPTPGRQT RQSDEASKSF RTPGRVSTPT GSKLKSSNNR HEDLLRMEPE ELMLSTEVIG QRDSWDLSDR ERDIRQGIDL ATTLERIEKN FVISDPRLPD
401: NPIIFASDSF LELTEYSREE ILGRNCRFLQ GPETDQATVQ KIRDAIRDQR EITVQLINYT KSGKKFWNLF HLQPMRDQKG ELQYFIGVQL DGSDHVEPLQ
501: NRLSERTEMQ SSKLVKATAT NVDEAVRELP DANTRPEDLW AAHSKPVYPL PHNKESTSWK AIKKIQASGE TVGLHHFKPI KPLGSGDTGS VHLVELKGTG
601: ELYAMKAMEK TMMLNRNKAH RACIEREIIS LLDHPFLPTL YASFQTSTHV CLITDFCPGG ELFALLDRQP MKILTEDSAR FYAAEVVIGL EYLHCLGIVY
701: RDLKPENILL KKDGHIVLAD FDLSFMTTCT PQLIIPAAPS KRRRSKSQPL PTFVAEPSTQ SNSFVGTEEY IAPEIITGAG HTSAIDWWAL GILLYEMLYG
801: RTPFRGKNRQ KTFANILHKD LTFPSSIPVS LVGRQLINTL LNRDPSSRLG SKGGANEIKQ HAFFRGINWP LIRGMSPPPL DAPLSIIEKD PNAKDIKWED
901: DGVLVNSTDL DIDLF

Arabidopsis Description

PHOT2Phototropin-2 [Source:UniProtKB/Swiss-Prot;Acc:P93025]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.