Factsheet for GSMUA_Achr8P25430_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, vacuole
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45318	Soybean	cytosol	14.7	76.11
Os04t0304200-01	Rice	plasma membrane	60.41	73.02
TraesCS2B01G290500.1	Wheat	cytosol	66.2	69.02
TraesCS2D01G271600.1	Wheat	cytosol	66.09	68.9
TraesCS2A01G272400.1	Wheat	cytosol	65.67	68.69
EES14872	Sorghum	cytosol	65.02	68.09
Bra020388.1-P	Field mustard	cytosol	62.88	66.52
Bra002669.1-P	Field mustard	cytosol	62.77	66.33
CDY62690	Canola	cytosol	64.91	66.19
Solyc01g097770.2.1	Tomato	plastid	67.81	66.18
CDY43878	Canola	cytosol	64.81	66.16
VIT_03s0038g04210.t01	Wine grape	cytosol	71.03	66.13
AT5G58140.2	Thale cress	cytosol	64.91	66.12
CDY02797	Canola	cytosol	64.81	65.8
CDY32722	Canola	cytosol	64.81	65.72
KRH07591	Soybean	cytosol	69.74	65.66
CDY58574	Canola	cytosol	64.38	65.22
CDX88659	Canola	cytosol	64.06	64.61
Zm00001d032353_P001	Maize	cytosol	64.59	64.59
Bra006782.1-P	Field mustard	cytosol	61.8	63.86
KRH45326	Soybean	cytosol	54.94	62.75
GSMUA_Achr4P30620_001	Banana	cytosol	58.05	58.42
GSMUA_Achr7P10360_001	Banana	cytosol	57.51	55.78
GSMUA_Achr4P23010_001	Banana	cytosol	11.16	42.28
GSMUA_Achr5P22330_001	Banana	cytosol	13.41	39.81
GSMUA_Achr2P13010_001	Banana	cytosol	13.41	39.31
GSMUA_AchrUn_...	Banana	cytosol	14.38	37.64
GSMUA_Achr7P02080_001	Banana	cytosol, mitochondrion	14.38	33.84
GSMUA_Achr9P07870_001	Banana	plastid	15.45	30.64
GSMUA_Achr5P03970_001	Banana	cytosol	10.94	28.41

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	MapMan:20.5.1	MapMan:26.1.2.2.1	Gene3D:3.30.200.20	Gene3D:3.30.450.20
ncoils:Coil	GO:GO:0000155	GO:GO:0000160	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0007623
GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009606	GO:GO:0009628	GO:GO:0009637
GO:GO:0009638	GO:GO:0009719	GO:GO:0009735	GO:GO:0009785	GO:GO:0009882	GO:GO:0009987
GO:GO:0010118	GO:GO:0010181	GO:GO:0010362	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0023014	GO:GO:0038023	GO:GO:0042802	EnsemblPlantsGene:GSMUA_Achr8G25430_001	EnsemblPlants:GSMUA_Achr8P25430_001
EnsemblPlants:GSMUA_Achr8T25430_001	InterPro:IPR000014	InterPro:IPR000700	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0TTJ6
InterPro:PAC	InterPro:PAS	InterPro:PAS-assoc_C	InterPro:PAS-like_dom_sf	PFAM:PF00069	PFAM:PF13426
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50112	PFscan:PS50113	PANTHER:PTHR24351
PANTHER:PTHR24351:SF173	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00086	SMART:SM00091	SMART:SM00220
SUPFAM:SSF55785	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGRFAMs:TIGR00229	UniParc:UPI0002958B42	:

Description

Phototropin-2 [Source:GMGC_GENE;Acc:GSMUA_Achr8G25430_001]

Coordinates

chr8:+:29285326..29322901

Molecular Weight (calculated)

105634.0 Da

IEP (calculated)

7.579

GRAVY (calculated)

-0.471

Length

932 amino acids

Sequence
(BLAST)

001: MIPSSCKSEG ASGMLTDTEP TEKWMAFPTV GSKMPPASTE ILEETSKIKS THESQRSSWD RNKISTEIVS DSARTSIESS YSLESAIPRV SQELKDALST
101: LQQTFVVSDA TRPDCPIVYA STGFFSMTGY SAKEIIGRNC RFLQGPDTDK LEIAKIREAV RTGKSYCGRL LNYKKDGTKF WNLLTITPIR DVNGNIVKYI
201: GMQVEVSKYT EGLNDKTMRP NALPMSLIRY DARQKEKALS SIEEVVQTVK HPRSHSQAVD HDIAIKFDAH ETIQIDSSLQ DSSEIKHFKS PGRMTISLDA
301: KRESSRMSSW KPGRSSSTGP YILDFVPKNS SLPKYTSNNL CCYTKSLPVI CRFMARKQSS IERYEPDIEP EILMTKDVQR TESWDHVERE TDIRQGIDLA
401: TTLERIEKNF VITDPRLPDN PIIFASDSFL ELTEYTREEI LGRNCRFLQG PDTDQGTVAK IREAIREQRE VTVQLINYTK SGKKFWNLFH LQPMRDQKGE
501: LQYFIGVQLD GSDHVEPLRN RLSEKTELHS AKVVKATAEN VDEAVRELPD PNLRPEYLWA IHSKPVFPKP HKKNNSSWVA INKIAGKGEE IGLKNFRPLR
601: PLGCGDTGSV HLVELQGTGE LFAMKAMDKS VMLNRNKVHR ACVEREIYSL LDHPFLPTLY TSFQTTTHVC LITDFCPGGE LFALIDKQPM KIFKEEAARF
701: YAAEVVVGLE YLHCQGIIYR DLKPENILLQ KDGHVVLTDF DLSFLTNCKP QVVKQSLPSK RRKSRDHLRP TFVAEPSTQS NSFVGTEEYI APEIITGAGH
801: SSAIDWWALG ILLYEMLYGR TPFRGKNRQK TFANILHKDL TFPSSIPVSL AARQLIHGLL NRDPANRLGS KTGANEIKQH PFFREINWPL IRCMTPPELD
901: VPLQLIGREP DPVVNDVQWD DEQTIIQGLE NL

Best Arabidopsis Sequence Match ( AT5G58140.1 )
(BLAST)

001: MERPRAPPSP LNDAESLSER RSLEIFNPSS GKETHGSTSS SSKPPLDGNN KGSSSKWMEF QDSAKITERT AEWGLSAVKP DSGDDGISFK LSSEVERSKN
101: MSRRSSEEST SSESGAFPRV SQELKTALST LQQTFVVSDA TQPHCPIVYA SSGFFTMTGY SSKEIVGRNC RFLQGPDTDK NEVAKIRDCV KNGKSYCGRL
201: LNYKKDGTPF WNLLTVTPIK DDQGNTIKFI GMQVEVSKYT EGVNDKALRP NGLSKSLIRY DARQKEKALD SITEVVQTIR HRKSQVQESV SNDTMVKPDS
301: STTPTPGRQT RQSDEASKSF RTPGRVSTPT GSKLKSSNNR HEDLLRMEPE ELMLSTEVIG QRDSWDLSDR ERDIRQGIDL ATTLERIEKN FVISDPRLPD
401: NPIIFASDSF LELTEYSREE ILGRNCRFLQ GPETDQATVQ KIRDAIRDQR EITVQLINYT KSGKKFWNLF HLQPMRDQKG ELQYFIGVQL DGSDHVEPLQ
501: NRLSERTEMQ SSKLVKATAT NVDEAVRELP DANTRPEDLW AAHSKPVYPL PHNKESTSWK AIKKIQASGE TVGLHHFKPI KPLGSGDTGS VHLVELKGTG
601: ELYAMKAMEK TMMLNRNKAH RACIEREIIS LLDHPFLPTL YASFQTSTHV CLITDFCPGG ELFALLDRQP MKILTEDSAR FYAAEVVIGL EYLHCLGIVY
701: RDLKPENILL KKDGHIVLAD FDLSFMTTCT PQLIIPAAPS KRRRSKSQPL PTFVAEPSTQ SNSFVGTEEY IAPEIITGAG HTSAIDWWAL GILLYEMLYG
801: RTPFRGKNRQ KTFANILHKD LTFPSSIPVS LVGRQLINTL LNRDPSSRLG SKGGANEIKQ HAFFRGINWP LIRGMSPPPL DAPLSIIEKD PNAKDIKWED
901: DGVLVNSTDL DIDLF

Arabidopsis Description

PHOT2Phototropin-2 [Source:UniProtKB/Swiss-Prot;Acc:P93025]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.