Factsheet for GSMUA_Achr7P10360_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P30620_001	Banana	cytosol	80.75	83.8
Os12t0101800-02	Rice	mitochondrion	53.59	77.1
HORVU5Hr1G049160.8	Barley	cytosol	70.24	73.45
EES15492	Sorghum	cytosol	69.41	73.06
Zm00001d044599_P001	Maize	cytosol, nucleus, plastid	69.09	72.89
TraesCS5D01G162400.1	Wheat	cytosol	69.82	72.54
Os11t0102200-00	Rice	cytosol, plasma membrane, plastid	69.51	72.53
TraesCS5A01G157000.1	Wheat	cytosol	68.89	71.96
TraesCS5B01G155200.4	Wheat	cytosol	69.82	70.19
VIT_06s0004g03700.t01	Wine grape	cytosol, plastid	72.22	69.12
CDX77857	Canola	cytosol	51.4	67.76
CDY30927	Canola	cytosol	64.2	65.92
KRH24973	Soybean	cytosol	66.29	65.2
KRH22966	Soybean	nucleus, plastid	66.39	64.97
Solyc11g072710.1.1	Tomato	plastid	68.47	64.7
KRH10351	Soybean	nucleus, plastid	64.41	64.35
AT3G45780.2	Thale cress	cytosol	66.29	63.96
PGSC0003DMT400065251	Potato	cytosol	67.85	63.86
Bra019474.1-P	Field mustard	nucleus, plastid	63.16	63.03
GSMUA_Achr8P25430_001	Banana	cytosol	55.78	57.51
GSMUA_Achr4P23010_001	Banana	cytosol	10.93	42.68
GSMUA_Achr2P13010_001	Banana	cytosol	13.63	41.2
GSMUA_AchrUn_...	Banana	cytosol	14.36	38.76
GSMUA_Achr5P22330_001	Banana	cytosol	12.59	38.53
GSMUA_Achr7P02080_001	Banana	cytosol, mitochondrion	14.05	34.09
GSMUA_Achr9P07870_001	Banana	plastid	16.02	32.77
GSMUA_Achr5P03970_001	Banana	cytosol	11.24	30.08

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	MapMan:20.5.1	MapMan:26.1.2.2.1	Gene3D:3.30.200.20	Gene3D:3.30.450.20
GO:GO:0000155	GO:GO:0000160	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0023014	GO:GO:0038023
EnsemblPlantsGene:GSMUA_Achr7G10360_001	EnsemblPlants:GSMUA_Achr7P10360_001	EnsemblPlants:GSMUA_Achr7T10360_001	InterPro:IPR000014	InterPro:IPR000700	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M0TGC4	InterPro:PAC	InterPro:PAS	InterPro:PAS-assoc_C	InterPro:PAS-like_dom_sf
PFAM:PF00069	PFAM:PF13426	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50112
PFscan:PS50113	PANTHER:PTHR24351	PANTHER:PTHR24351:SF173	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00086
SMART:SM00091	SMART:SM00220	SUPFAM:SSF55785	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGRFAMs:TIGR00229
UniParc:UPI000296D27C	SEG:seg	:	:	:	:

Description

Phototropin-1A [Source:GMGC_GENE;Acc:GSMUA_Achr7G10360_001]

Coordinates

chr7:-:8362311..8385902

Molecular Weight (calculated)

107624.0 Da

IEP (calculated)

7.223

GRAVY (calculated)

-0.478

Length

961 amino acids

Sequence
(BLAST)

001: MDEESPTHRP TSSLIPPLPR DSRGSLEVFN PTQPKPRSSP FTTWQSRPDP QLSAHRAPPP PAAASAGGDD DEDIIRPWMA LPSTSAAAPL PYLPYPISKK
101: PPAAAEDVGA AAQRAAEWGL GRSRRASGGS SYRSSEDSEV AARGGFPRVS EELREALSAF QQSFVVSDAT KSDHPVMYAS AGFFHMTGYL AKEVIGRNCR
201: FLQGSGTDPE EIARLREALS AGTNYCGRIL NYKKDGAPFW NLLTIAPIKD EAGNTLKFIG MQVEVSKYTE GSKDIMVRPN GLPESLIRYD ARQKDRARSS
301: VSDLVLAVKD PHSLSESRSY PFMRKSEGGG QTVVSEVPGK KSSENATAAR RNSRSGMRSS MNKICELPEV ANKSRKSGLK SFMGLIGFGH LNVEKHELEV
401: PIEESLLMES DDERPESFDD EERKKEIRRG IDLATTLERI EKNFVITDPR LPDNPIIFAS DSFLQLTEYS REEILGRNCR FLQGPETDAA TVRKIREAID
501: NQRDITVQLI NYTKSGKKFW NLFHLQPMRD QKGEVQYFIG VQLDGSEHVE PLQNCIPADT AKESSKLVKE TADNVDEAVR ELPDANLKPE DLWFNHSKLV
601: LPKPHMRNDT SWRAIQKVVE SGEKIGLKHF RPVKPLGSGD TGSVHLVELL GTGEYFAMKA MDKNIMLNRN KVHRACAERE ILDMLDHPFL PTLYASFQSK
701: THICLITDYC PGGELFLLLD RQPEKVLKED AVRFYAAEVV VALEYLHCQG IIYRDLKPEN ILLRRDGHVS LTDFDLSCLT SCKPQLLLPT VEDKKKQIKE
801: KISPIFVAEP MRASNSFVGT EEYIAPEIIS GAGHTSAVDW WALGILLYEM LYGYTPFRGK TRQKTFANIL HKDLRFPGSI SQVSLPAKQL IYRLLHRDPR
901: NRLGSCHGAN EVKKHPFFRG INWALVRCMS PPKLDTPLFD PKMAKEAEMV DTELVDVQTV F

Best Arabidopsis Sequence Match ( AT3G45780.1 )
(BLAST)

001: MEPTEKPSTK PSSRTLPRDT RGSLEVFNPS TQLTRPDNPV FRPEPPAWQN LSDPRGTSPQ PRPQQEPAPS NPVRSDQEIA VTTSWMALKD PSPETISKKT
101: ITAEKPQKSA VAAEQRAAEW GLVLKTDTKT GKPQGVGVRN SGGTENDPNG KKTTSQRNSQ NSCRSSGEMS DGDVPGGRSG IPRVSEDLKD ALSTFQQTFV
201: VSDATKPDYP IMYASAGFFN MTGYTSKEVV GRNCRFLQGS GTDADELAKI RETLAAGNNY CGRILNYKKD GTSFWNLLTI APIKDESGKV LKFIGMQVEV
301: SKHTEGAKEK ALRPNGLPES LIRYDARQKD MATNSVTELV EAVKRPRALS ESTNLHPFMT KSESDELPKK PARRMSENVV PSGRRNSGGG RRNSMQRINE
401: IPEKKSRKSS LSFMGIKKKS ESLDESIDDG FIEYGEEDDE ISDRDERPES VDDKVRQKEM RKGIDLATTL ERIEKNFVIT DPRLPDNPII FASDSFLELT
501: EYSREEILGR NCRFLQGPET DLTTVKKIRN AIDNQTEVTV QLINYTKSGK KFWNIFHLQP MRDQKGEVQY FIGVQLDGSK HVEPVRNVIE ETAVKEGEDL
601: VKKTAVNIDE AVRELPDANM TPEDLWANHS KVVHCKPHRK DSPPWIAIQK VLESGEPIGL KHFKPVKPLG SGDTGSVHLV ELVGTDQLFA MKAMDKAVML
701: NRNKVHRARA EREILDLLDH PFLPALYASF QTKTHICLIT DYYPGGELFM LLDRQPRKVL KEDAVRFYAA QVVVALEYLH CQGIIYRDLK PENVLIQGNG
801: DISLSDFDLS CLTSCKPQLL IPSIDEKKKK KQQKSQQTPI FMAEPMRASN SFVGTEEYIA PEIISGAGHT SAVDWWALGI LMYEMLYGYT PFRGKTRQKT
901: FTNVLQKDLK FPASIPASLQ VKQLIFRLLQ RDPKKRLGCF EGANEVKQHS FFKGINWALI RCTNPPELET PIFSGEAENG EKVVDPELED LQTNVF

Arabidopsis Description

PHOT1RPT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VFT4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.