Factsheet for GSMUA_Achr4P30620_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P10360_001	Banana	cytosol	83.8	80.75
Os12t0101800-02	Rice	mitochondrion	54.21	75.15
EES15492	Sorghum	cytosol	73.22	74.26
Zm00001d044599_P001	Maize	cytosol, nucleus, plastid	73.0	74.2
HORVU5Hr1G049160.8	Barley	cytosol	72.68	73.23
TraesCS5D01G162400.1	Wheat	cytosol	72.35	72.43
Os11t0102200-00	Rice	cytosol, plasma membrane, plastid	71.6	71.99
TraesCS5A01G157000.1	Wheat	cytosol	71.06	71.52
TraesCS5B01G155200.4	Wheat	cytosol	72.46	70.19
VIT_06s0004g03700.t01	Wine grape	cytosol, plastid	75.59	69.72
CDX77857	Canola	cytosol	53.78	68.31
CDY30927	Canola	cytosol	68.57	67.84
KRH22966	Soybean	nucleus, plastid	70.3	66.29
Solyc11g072710.1.1	Tomato	plastid	72.57	66.08
KRH24973	Soybean	cytosol	69.55	65.92
AT3G45780.2	Thale cress	cytosol	70.63	65.66
KRH10351	Soybean	nucleus, plastid	67.93	65.38
PGSC0003DMT400065251	Potato	cytosol	71.92	65.23
Bra019474.1-P	Field mustard	nucleus, plastid	67.39	64.8
GSMUA_Achr8P25430_001	Banana	cytosol	58.42	58.05
GSMUA_Achr4P23010_001	Banana	cytosol	11.23	42.28
GSMUA_Achr2P13010_001	Banana	cytosol	13.71	39.94
GSMUA_AchrUn_...	Banana	cytosol	15.01	39.04
GSMUA_Achr5P22330_001	Banana	cytosol	12.96	38.22
GSMUA_Achr7P02080_001	Banana	cytosol, mitochondrion	14.47	33.84
GSMUA_Achr9P07870_001	Banana	plastid	16.52	32.55
GSMUA_Achr5P03970_001	Banana	cytosol	11.34	29.25

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	MapMan:20.5.1	MapMan:26.1.2.2.1	Gene3D:3.30.200.20	Gene3D:3.30.450.20
ncoils:Coil	GO:GO:0000155	GO:GO:0000160	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0023014
GO:GO:0038023	EnsemblPlantsGene:GSMUA_Achr4G30620_001	EnsemblPlants:GSMUA_Achr4P30620_001	EnsemblPlants:GSMUA_Achr4T30620_001	InterPro:IPR000014	InterPro:IPR000700
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0STH4	InterPro:PAC	InterPro:PAS	InterPro:PAS-assoc_C
InterPro:PAS-like_dom_sf	PFAM:PF00069	PFAM:PF13426	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50112	PFscan:PS50113	PANTHER:PTHR24351	PANTHER:PTHR24351:SF173	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00086	SMART:SM00091	SMART:SM00220	SUPFAM:SSF55785	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
TIGRFAMs:TIGR00229	UniParc:UPI000296C055	:	:	:	:

Description

Phototropin-1A [Source:GMGC_GENE;Acc:GSMUA_Achr4G30620_001]

Coordinates

chr4:+:28116521..28137046

Molecular Weight (calculated)

103903.0 Da

IEP (calculated)

6.824

GRAVY (calculated)

-0.475

Length

926 amino acids

Sequence
(BLAST)

001: MDEESAARRP TSSLIPPLPR DSRGSLEVFN PSSFSPRPHH TQPSPYAAWQ PRAEPPPSSH WDPPDVGAAA QRAAEWGLVL MTDEETGRPQ GVGVRRSEDS
101: ETGAPIAGGG KDKGGIPRVS EDLREALSAF QQTFVVSDAT KPDHPIMYAS AGFFNMTGYL AKEVIGRNCR FLQGAGTDPA EIAKIREALS AGTNYCGRIL
201: NYKKDGTPFW NLLTIAPIKD EAGNTLKFIG MQVEVSKYTE GSKETMVRPN GLPESLIRYD ARQKDRARSS VSDLVMAVKD PHALSESRNS PFMRTSEGGG
301: QIVLSEVPGR KNSGNGTPVW RNSRSEMRNP MQKISELPEV ANKSRISGLK SFMGLIGLGH ANIEKHELEV PVKEEDLLME SDDERPESFD DVERKKEMRR
401: GIDLATTLER IEKNFVITDP RLPDNPIIFA SDSFLELTEY SREEILGRNC RFLQGPETDP TTVRKIRDAI DNQRDVTVQL INYTKSGKKF WNLFHLQPMR
501: DQKAEVQYFI GVQLDGSEHV EPLQNCIPED TAKDSEKLVK ETADNVDEAV RELPDANLKP EDLWANHSKV VLPKPHMKNN PSWRAIQKVV GSGEKIGLKH
601: FRPVKPLGFG DTGSVHLVEL LGTGEFFAMK AMDKNTMLNR NKVHRACAER EILNILDHPF LPTLYASFQT KTHICLITDY CPGGELFLML DRQPAKVLKE
701: DAVRFYAAEV VVALEYLHCQ GIIYRDLKPE NILLQRDGHV ALTDFDLSCL TSCKPQLLLP RIEDKKKQMK GRIPPIFVAE PMRASNSFVG TEEYIAPEII
801: TGAGHTSAVD WWALGILLYE MLYGYTPFRG KTRQKTFANI LHKDLRFPGC ISVSLPAKQL IYRLLHRDPR NRLGSSQGAN EVKQHLFFRG INWALVRCMD
901: PPKLDMPVFD SKMADPEPVD VQIDIF

Best Arabidopsis Sequence Match ( AT3G45780.1 )
(BLAST)

001: MEPTEKPSTK PSSRTLPRDT RGSLEVFNPS TQLTRPDNPV FRPEPPAWQN LSDPRGTSPQ PRPQQEPAPS NPVRSDQEIA VTTSWMALKD PSPETISKKT
101: ITAEKPQKSA VAAEQRAAEW GLVLKTDTKT GKPQGVGVRN SGGTENDPNG KKTTSQRNSQ NSCRSSGEMS DGDVPGGRSG IPRVSEDLKD ALSTFQQTFV
201: VSDATKPDYP IMYASAGFFN MTGYTSKEVV GRNCRFLQGS GTDADELAKI RETLAAGNNY CGRILNYKKD GTSFWNLLTI APIKDESGKV LKFIGMQVEV
301: SKHTEGAKEK ALRPNGLPES LIRYDARQKD MATNSVTELV EAVKRPRALS ESTNLHPFMT KSESDELPKK PARRMSENVV PSGRRNSGGG RRNSMQRINE
401: IPEKKSRKSS LSFMGIKKKS ESLDESIDDG FIEYGEEDDE ISDRDERPES VDDKVRQKEM RKGIDLATTL ERIEKNFVIT DPRLPDNPII FASDSFLELT
501: EYSREEILGR NCRFLQGPET DLTTVKKIRN AIDNQTEVTV QLINYTKSGK KFWNIFHLQP MRDQKGEVQY FIGVQLDGSK HVEPVRNVIE ETAVKEGEDL
601: VKKTAVNIDE AVRELPDANM TPEDLWANHS KVVHCKPHRK DSPPWIAIQK VLESGEPIGL KHFKPVKPLG SGDTGSVHLV ELVGTDQLFA MKAMDKAVML
701: NRNKVHRARA EREILDLLDH PFLPALYASF QTKTHICLIT DYYPGGELFM LLDRQPRKVL KEDAVRFYAA QVVVALEYLH CQGIIYRDLK PENVLIQGNG
801: DISLSDFDLS CLTSCKPQLL IPSIDEKKKK KQQKSQQTPI FMAEPMRASN SFVGTEEYIA PEIISGAGHT SAVDWWALGI LMYEMLYGYT PFRGKTRQKT
901: FTNVLQKDLK FPASIPASLQ VKQLIFRLLQ RDPKKRLGCF EGANEVKQHS FFKGINWALI RCTNPPELET PIFSGEAENG EKVVDPELED LQTNVF

Arabidopsis Description

PHOT1RPT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VFT4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.