Factsheet for VIT_06s0004g03700.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 4
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22966	Soybean	nucleus, plastid	74.4	76.07
KRH24973	Soybean	cytosol	73.61	75.64
GSMUA_Achr4P30620_001	Banana	cytosol	69.72	75.59
KRH10351	Soybean	nucleus, plastid	72.01	75.16
Solyc11g072710.1.1	Tomato	plastid	75.4	74.43
CDY30927	Canola	cytosol	69.22	74.25
PGSC0003DMT400065251	Potato	cytosol	75.1	73.85
AT3G45780.2	Thale cress	cytosol	72.61	73.19
CDX77857	Canola	cytosol	53.09	73.11
Bra019474.1-P	Field mustard	nucleus, plastid	69.92	72.9
GSMUA_Achr7P10360_001	Banana	cytosol	69.12	72.22
Os12t0101800-02	Rice	mitochondrion	48.01	72.16
Zm00001d044599_P001	Maize	cytosol, nucleus, plastid	64.64	71.24
EES15492	Sorghum	cytosol	64.74	71.19
HORVU5Hr1G049160.8	Barley	cytosol	64.44	70.4
TraesCS5D01G162400.1	Wheat	cytosol	64.14	69.62
TraesCS5A01G157000.1	Wheat	cytosol	63.35	69.13
Os11t0102200-00	Rice	cytosol, plasma membrane, plastid	63.05	68.73
TraesCS5B01G155200.4	Wheat	cytosol	64.54	67.78
VIT_03s0038g04210.t01	Wine grape	cytosol	58.07	58.24
VIT_06s0004g01780.t01	Wine grape	cytosol	14.14	34.63

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100262213	wikigene:100262213	MapMan:18.4.6.5	MapMan:20.5.1	MapMan:26.1.2.2.1
Gene3D:3.30.200.20	Gene3D:3.30.450.20	ProteinID:CCB43626	ProteinID:CCB43626.1	UniProt:F6GTW2	EMBL:FN594951
GO:GO:0000155	GO:GO:0000160	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0023014	GO:GO:0035556	GO:GO:0038023
InterPro:IPR000014	InterPro:IPR000700	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100262213	wikigene:LOC100262213
InterPro:PAC	InterPro:PAS	InterPro:PAS-assoc_C	InterPro:PAS-like_dom_sf	PFAM:PF00069	PFAM:PF13426
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50112	PFscan:PS50113	PANTHER:PTHR24351
PANTHER:PTHR24351:SF173	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00086	SMART:SM00091	SMART:SM00220
SUPFAM:SSF55785	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC59107	TIGRFAMs:TIGR00229	UniParc:UPI00019836CF
ArrayExpress:VIT_06s0004g03700	EnsemblPlantsGene:VIT_06s0004g03700	EnsemblPlants:VIT_06s0004g03700.t01	unigene:Vvi.1590	RefSeq:XP_002281752	RefSeq:XP_002281752.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6:+:4659710..4675061

Molecular Weight (calculated)

112911.0 Da

IEP (calculated)

7.299

GRAVY (calculated)

-0.696

Length

1004 amino acids

Sequence
(BLAST)

0001: MEASDDSAKS PSLIPPLPRD SRGSLEVFNP STYSTRPTNQ AFRPQPTWKS WAEPRGTPER EGSPELSSKS GRSADEITSW MALKEPSPAP PLPLAQKSVS
0101: PAFNVQDDTR QKPTRKTQLS GEVDNAAQRA AEWGLMLKTD TETGKPQGVA VRTSGGDEPN YKTGTSRRNS GNSVRSSGEM SDEGGAGKDR AFPRVSEDLK
0201: DALSTFQQTF VVSDATKPDY PILYASAGFF KMTGYTSKEV IGRNCRFLQG SGTDPEDVAK IREALHAGNS YCGRLLNYKK DGTPFWNLLT ISPIKDENGN
0301: VLKFIGMQVE VSKHTEGSKE KMTRPNGLPE SLIRYDARQK DMATNSVSEL VQAVKKPRSL SESSDRPFMR KSEDGEQERP EAPGRRNSES VAPPRRNSQS
0401: GRRASMQRIS ELPEKKPRKS SRLSFMRIMR KSQAHTEEFD TEVLVDDTSD SEDDERPDSI DNKTRQREMR RGIDLATTLE RIEKNFVITD PRLPDNPIIF
0501: ASDSFLELTE YSREEILGRN CRFLQGPETD PATVRKIREA IDNQTDVTVQ LINYTKSGKK FWNLFHLQPM RDQKGEVQYF IGVQLDGSEH VEPLHNCIPE
0601: STAKESAKLV KETAENIDDA VRELPDANLK PEDLWSNHSK VVLPKPHRKE SSAWKAIQKI LEDGEQIGLK HFRPVKPLGS GDTGSVHLVE LCGTGEYFAM
0701: KAMDKNVMLN RNKVHRACAE REILDMLDHP FLPALYASFQ TKTHICLITD YCPGGELFLL LDRQPTKVLK EDAVRFYAAE VVVALEYLHC QGVIYRDLKP
0801: ENVLLQSSGH VALTDFDLSC LTSCKPQLLM PNTNEKKRQH KGQQNPIFMA EPMRASNSFV GTEEYIAPEI ITGAGHTSAV DWWALGILLY EMLYGYTPFR
0901: GKTRQKTFAN ILHKDLKFPS SISVSLNAKQ LMYRLLHRDP KNRLGSREGA NEIKRHPFFR GVNWALVRCM NPPELDAPPL ETTDAEKEVK SVDPELLDLQ
1001: TNIF

Best Arabidopsis Sequence Match ( AT3G45780.1 )
(BLAST)

001: MEPTEKPSTK PSSRTLPRDT RGSLEVFNPS TQLTRPDNPV FRPEPPAWQN LSDPRGTSPQ PRPQQEPAPS NPVRSDQEIA VTTSWMALKD PSPETISKKT
101: ITAEKPQKSA VAAEQRAAEW GLVLKTDTKT GKPQGVGVRN SGGTENDPNG KKTTSQRNSQ NSCRSSGEMS DGDVPGGRSG IPRVSEDLKD ALSTFQQTFV
201: VSDATKPDYP IMYASAGFFN MTGYTSKEVV GRNCRFLQGS GTDADELAKI RETLAAGNNY CGRILNYKKD GTSFWNLLTI APIKDESGKV LKFIGMQVEV
301: SKHTEGAKEK ALRPNGLPES LIRYDARQKD MATNSVTELV EAVKRPRALS ESTNLHPFMT KSESDELPKK PARRMSENVV PSGRRNSGGG RRNSMQRINE
401: IPEKKSRKSS LSFMGIKKKS ESLDESIDDG FIEYGEEDDE ISDRDERPES VDDKVRQKEM RKGIDLATTL ERIEKNFVIT DPRLPDNPII FASDSFLELT
501: EYSREEILGR NCRFLQGPET DLTTVKKIRN AIDNQTEVTV QLINYTKSGK KFWNIFHLQP MRDQKGEVQY FIGVQLDGSK HVEPVRNVIE ETAVKEGEDL
601: VKKTAVNIDE AVRELPDANM TPEDLWANHS KVVHCKPHRK DSPPWIAIQK VLESGEPIGL KHFKPVKPLG SGDTGSVHLV ELVGTDQLFA MKAMDKAVML
701: NRNKVHRARA EREILDLLDH PFLPALYASF QTKTHICLIT DYYPGGELFM LLDRQPRKVL KEDAVRFYAA QVVVALEYLH CQGIIYRDLK PENVLIQGNG
801: DISLSDFDLS CLTSCKPQLL IPSIDEKKKK KQQKSQQTPI FMAEPMRASN SFVGTEEYIA PEIISGAGHT SAVDWWALGI LMYEMLYGYT PFRGKTRQKT
901: FTNVLQKDLK FPASIPASLQ VKQLIFRLLQ RDPKKRLGCF EGANEVKQHS FFKGINWALI RCTNPPELET PIFSGEAENG EKVVDPELED LQTNVF

Arabidopsis Description

PHOT1RPT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VFT4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.