CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30927	Canola	cytosol	96.98	75.53
Bra019474.1-P	Field mustard	nucleus, plastid	91.91	69.57
Os12t0101800-02	Rice	mitochondrion	61.87	67.52
AT3G45780.2	Thale cress	cytosol	89.44	65.46
KRH22966	Soybean	nucleus, plastid	73.39	54.48
Zm00001d044599_P001	Maize	cytosol, nucleus, plastid	67.22	53.79
GSMUA_Achr4P30620_001	Banana	cytosol	68.31	53.78
KRH10351	Soybean	nucleus, plastid	70.37	53.33
EES15492	Sorghum	cytosol	66.67	53.23
VIT_06s0004g03700.t01	Wine grape	cytosol, plastid	73.11	53.09
HORVU5Hr1G049160.8	Barley	cytosol	66.26	52.56
TraesCS5D01G162400.1	Wheat	cytosol	65.98	52.0
TraesCS5A01G157000.1	Wheat	cytosol	65.43	51.85
Solyc11g072710.1.1	Tomato	plastid	72.02	51.62
KRH24973	Soybean	cytosol	69.14	51.59
GSMUA_Achr7P10360_001	Banana	cytosol	67.76	51.4
PGSC0003DMT400065251	Potato	cytosol	71.88	51.32
Os11t0102200-00	Rice	cytosol, plasma membrane, plastid	64.61	51.14
TraesCS5B01G155200.4	Wheat	cytosol	65.98	50.31
CDY62690	Canola	cytosol	57.89	46.17
CDY43878	Canola	cytosol	57.75	46.11
CDY58574	Canola	cytosol	58.02	45.98
CDX88659	Canola	cytosol	57.89	45.67
CDY02797	Canola	cytosol	57.2	45.42
CDY32722	Canola	cytosol	57.06	45.27
CDY68493	Canola	cytosol	13.03	38.93
CDY71460	Canola	cytosol	12.76	38.11
CDX99190	Canola	cytosol	13.85	35.07
CDY25216	Canola	cytosol	17.83	34.21
CDY22830	Canola	cytosol, plastid	17.83	34.21
CDY06386	Canola	nucleus, plastid	18.24	33.17
CDY19600	Canola	plastid	18.11	32.75
CDY00833	Canola	cytosol	16.6	29.58
CDY27899	Canola	cytosol	16.6	29.3
CDY70398	Canola	nucleus, plastid	1.1	2.69

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	MapMan:20.5.1	MapMan:26.1.2.2.1	Gene3D:3.30.200.20	Gene3D:3.30.450.20
GO:A0A078CM76	EnsemblPlants:CDX77857	ProteinID:CDX77857	ProteinID:CDX77857.1	GO:GO:0000155	GO:GO:0000160
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004871	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023
EnsemblPlantsGene:GSBRNA2T00129019001	InterPro:IPR000014	InterPro:IPR000700	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:PAC
InterPro:PAS	InterPro:PAS-assoc_C	InterPro:PAS-like_dom_sf	PFAM:PF00069	PFAM:PF13426	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50112	PFscan:PS50113	PANTHER:PTHR24351	PANTHER:PTHR24351:SF173
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00086	SMART:SM00220	SUPFAM:SSF55785	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	TIGRFAMs:TIGR00229	UniParc:UPI0004EDDDB1	SEG:seg	:	:

Description

BnaC03g53620D

Coordinates

chrLK031813:-:938943..945650

Molecular Weight (calculated)

82905.9 Da

IEP (calculated)

7.696

GRAVY (calculated)

-0.629

Length

729 amino acids

Sequence
(BLAST)

001: MSRSVQNHNS TTCKIHVIFR MQVEVSKHTE GAKEKTLRPN GLPESLIRYD ARQKDMATNS VTELVEAVKR PRALSESTHS HPFKRKSESD ELPAKPGRRM
101: SENVVPSGRR NSGGGRRNSM QRISENPEKK PAKTSRLSFM GMKKKGQSQD ESLEDGFIEY GEEDDEISDR DERPESVDDK VRQKEMRKGM DLATTLERIE
201: KNFVITDPRL PDNPIIFASD SFLELTEYSR EEILGRNCRF LQGPETDPTT VKKIRAAIDN QTEVTVQLIN YTKSGKKFWN IFHLQPMRDQ KGEVQYFIGV
301: QLDGSKHVEP VRNVIEEAAV KEGEELVKKT AVNIDEAVRE LPDANMTPED LWANHSKIVH SKPHRKDSPS WKAIQKVLES GEQIGLNHFR PVKPLGSGDT
401: GSVHLVELNG TDQLFAMKAM DKTVMLNRNK VHRARAEREI LDLLDHPFLP ALYASFQTKT HICLITDYYP GGELFMLLDR QPRKVLKEDA VRFYAAQVVA
501: SHSTSTFNFI ETWDARIIYR DLKPENVLIH GNGDISLTDF DLSCLTSCRP QLLIPSIDEK KKKKQQKSQQ SPVFMAEPMR ASNSFVGTEE YIAPEIITGA
601: GHTSAVDWWA LGILMYEMLY GYTPFRGKTR QKTFANVLQK DLKFPASIPA SLQVKQLIFR LLQRDPKKRL GCLEGANEVK NHSFFKGINW ALIRCTTPPE
701: LETPIFPGEA ENGENVVDPE LEDLQTNVF

Best Arabidopsis Sequence Match ( AT3G45780.1 )
(BLAST)

001: MEPTEKPSTK PSSRTLPRDT RGSLEVFNPS TQLTRPDNPV FRPEPPAWQN LSDPRGTSPQ PRPQQEPAPS NPVRSDQEIA VTTSWMALKD PSPETISKKT
101: ITAEKPQKSA VAAEQRAAEW GLVLKTDTKT GKPQGVGVRN SGGTENDPNG KKTTSQRNSQ NSCRSSGEMS DGDVPGGRSG IPRVSEDLKD ALSTFQQTFV
201: VSDATKPDYP IMYASAGFFN MTGYTSKEVV GRNCRFLQGS GTDADELAKI RETLAAGNNY CGRILNYKKD GTSFWNLLTI APIKDESGKV LKFIGMQVEV
301: SKHTEGAKEK ALRPNGLPES LIRYDARQKD MATNSVTELV EAVKRPRALS ESTNLHPFMT KSESDELPKK PARRMSENVV PSGRRNSGGG RRNSMQRINE
401: IPEKKSRKSS LSFMGIKKKS ESLDESIDDG FIEYGEEDDE ISDRDERPES VDDKVRQKEM RKGIDLATTL ERIEKNFVIT DPRLPDNPII FASDSFLELT
501: EYSREEILGR NCRFLQGPET DLTTVKKIRN AIDNQTEVTV QLINYTKSGK KFWNIFHLQP MRDQKGEVQY FIGVQLDGSK HVEPVRNVIE ETAVKEGEDL
601: VKKTAVNIDE AVRELPDANM TPEDLWANHS KVVHCKPHRK DSPPWIAIQK VLESGEPIGL KHFKPVKPLG SGDTGSVHLV ELVGTDQLFA MKAMDKAVML
701: NRNKVHRARA EREILDLLDH PFLPALYASF QTKTHICLIT DYYPGGELFM LLDRQPRKVL KEDAVRFYAA QVVVALEYLH CQGIIYRDLK PENVLIQGNG
801: DISLSDFDLS CLTSCKPQLL IPSIDEKKKK KQQKSQQTPI FMAEPMRASN SFVGTEEYIA PEIISGAGHT SAVDWWALGI LMYEMLYGYT PFRGKTRQKT
901: FTNVLQKDLK FPASIPASLQ VKQLIFRLLQ RDPKKRLGCF EGANEVKQHS FFKGINWALI RCTNPPELET PIFSGEAENG EKVVDPELED LQTNVF

Arabidopsis Description

PHOT1RPT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VFT4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.