CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88659	Canola	cytosol	97.17	96.75
Bra006782.1-P	Field mustard	cytosol	92.61	94.46
CDY62690	Canola	cytosol	90.65	91.25
CDY43878	Canola	cytosol	90.43	91.13
CDY32722	Canola	cytosol	90.54	90.64
CDY02797	Canola	cytosol	90.43	90.63
AT5G58140.2	Thale cress	cytosol	89.46	89.95
KRH45318	Soybean	cytosol	15.11	77.22
Os04t0304200-01	Rice	plasma membrane	57.72	68.87
Solyc01g097770.2.1	Tomato	plastid	70.76	68.17
KRH07591	Soybean	cytosol	71.96	66.87
VIT_03s0038g04210.t01	Wine grape	cytosol	72.17	66.33
TraesCS2B01G290500.1	Wheat	cytosol	63.37	65.21
TraesCS2A01G272400.1	Wheat	cytosol	63.04	65.1
TraesCS2D01G271600.1	Wheat	cytosol	62.93	64.77
GSMUA_Achr8P25430_001	Banana	cytosol	65.22	64.38
KRH45326	Soybean	cytosol	56.41	63.6
EES14872	Sorghum	cytosol	61.09	63.15
Zm00001d032353_P001	Maize	cytosol	60.54	59.76
CDX77857	Canola	cytosol	45.98	58.02
CDY30927	Canola	cytosol	57.93	56.94
CDY71460	Canola	cytosol	10.98	41.39
CDY68493	Canola	cytosol	10.98	41.39
CDY70398	Canola	nucleus, plastid	12.61	39.06
CDX99190	Canola	cytosol	11.85	37.85
CDY25216	Canola	cytosol	14.78	35.79
CDY22830	Canola	cytosol, plastid	14.67	35.53
CDY06386	Canola	nucleus, plastid	14.89	34.16
CDY19600	Canola	plastid	14.89	33.99
CDY00833	Canola	cytosol	14.35	32.27
CDY27899	Canola	cytosol	14.46	32.2

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	MapMan:20.5.1	MapMan:26.1.2.2.1	Gene3D:3.30.200.20	Gene3D:3.30.450.20
GO:A0A078J0E3	UniProt:A0A078J0E3	EnsemblPlants:CDY58574	ProteinID:CDY58574	ProteinID:CDY58574.1	GO:GO:0000155
GO:GO:0000160	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0023014	GO:GO:0038023	EnsemblPlantsGene:GSBRNA2T00024857001
InterPro:IPR000014	InterPro:IPR000700	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:PAC	InterPro:PAS
InterPro:PAS-assoc_C	InterPro:PAS-like_dom_sf	PFAM:PF00069	PFAM:PF13426	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS50112	PFscan:PS50113	PANTHER:PTHR24351	PANTHER:PTHR24351:SF173	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00086	SMART:SM00091	SMART:SM00220	SUPFAM:SSF55785	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	TIGRFAMs:TIGR00229	UniParc:UPI0004EE492A	SEG:seg	:	:

Description

BnaC03g12530DBnaC03g12530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0E3]

Coordinates

chrLK033679:-:42274..47378

Molecular Weight (calculated)

103458.0 Da

IEP (calculated)

8.497

GRAVY (calculated)

-0.542

Length

920 amino acids

Sequence
(BLAST)

001: MERPRAPPSS LTDLEPLSER RSLEVFNPSS GSSSSSKPHD GNGKGSKWME FQDSAKITER TAEWGLSAVK PESGENGITF KLSTEAERSK MSRRSSEEST
101: SSDSGAFPRV SQELKTALST LQQTFVVSDA TQPHCPIVYA SSGFFTMTGY TSKEIVGRNC RFLQGPDTDQ KEVAKIRDCV KNGKSYCGRL LNYKKDGTPF
201: WNLLTITPIK DDQGNTIKFI GMQVEVSKYT EGVNDKELRP NGLSKSLIRY DARQKEKALD SMTEVVQTIR HRKSQVRDSV SNDVLVKPDS ATTTPGRQAI
301: QSDEASMSAK TPGRVSTPAR SKSKSLSSNK KHEDVPSVEP EELMLSTEVI EPRDSWDRSE REKDIRQGID LATTLERIEK NFVISDPRLP DNPIIFASDS
401: FLELTEYTRE EILGRNCRFL QGPETDQSTV QKIRDAIRDQ REITVQLINY TKSGKKFWNL FHLQPMRDQK GELQYFIGVQ LDGSDHVEPI RNRLSERTEM
501: QSSKLVKATA TNVDEAVREL PDANMTPEDL WAAHSKPVYP LPHKKESASW KAIQKACIKN HITFDFIQAG GETVGLHHFK PVKPLGSGDT GSVHLVELKG
601: TGELYAMKAM EKTMMLNRNK AHRARIEREI ISLLDHPFLP TLYASFQTST HVCLITDFCP GGELFALLDR QPMKFLSEDS ARFYAAEVVI GLEYLHCLGI
701: VYRDLKPENI LLKKDGHIVL ADFDLSFMTS CTPQLIVPPA PNKRRRSSSS KSRALPTFVA EPITKSNSFV GTEEYIAPEI ITGAGHTSAI DWWALGILLY
801: EMLYGRTPFR GKNRQKTFAN ILHKDLTFPS SIPVSLVGRQ LINMLLNRDP RKRLGTKGGA NEIKQHAFFR GINWPLIRDM VPPPLDAPLR IIEKDPKAKD
901: RKWEDDGVLV NSMDIDIDLF

Best Arabidopsis Sequence Match ( AT5G58140.1 )
(BLAST)

001: MERPRAPPSP LNDAESLSER RSLEIFNPSS GKETHGSTSS SSKPPLDGNN KGSSSKWMEF QDSAKITERT AEWGLSAVKP DSGDDGISFK LSSEVERSKN
101: MSRRSSEEST SSESGAFPRV SQELKTALST LQQTFVVSDA TQPHCPIVYA SSGFFTMTGY SSKEIVGRNC RFLQGPDTDK NEVAKIRDCV KNGKSYCGRL
201: LNYKKDGTPF WNLLTVTPIK DDQGNTIKFI GMQVEVSKYT EGVNDKALRP NGLSKSLIRY DARQKEKALD SITEVVQTIR HRKSQVQESV SNDTMVKPDS
301: STTPTPGRQT RQSDEASKSF RTPGRVSTPT GSKLKSSNNR HEDLLRMEPE ELMLSTEVIG QRDSWDLSDR ERDIRQGIDL ATTLERIEKN FVISDPRLPD
401: NPIIFASDSF LELTEYSREE ILGRNCRFLQ GPETDQATVQ KIRDAIRDQR EITVQLINYT KSGKKFWNLF HLQPMRDQKG ELQYFIGVQL DGSDHVEPLQ
501: NRLSERTEMQ SSKLVKATAT NVDEAVRELP DANTRPEDLW AAHSKPVYPL PHNKESTSWK AIKKIQASGE TVGLHHFKPI KPLGSGDTGS VHLVELKGTG
601: ELYAMKAMEK TMMLNRNKAH RACIEREIIS LLDHPFLPTL YASFQTSTHV CLITDFCPGG ELFALLDRQP MKILTEDSAR FYAAEVVIGL EYLHCLGIVY
701: RDLKPENILL KKDGHIVLAD FDLSFMTTCT PQLIIPAAPS KRRRSKSQPL PTFVAEPSTQ SNSFVGTEEY IAPEIITGAG HTSAIDWWAL GILLYEMLYG
801: RTPFRGKNRQ KTFANILHKD LTFPSSIPVS LVGRQLINTL LNRDPSSRLG SKGGANEIKQ HAFFRGINWP LIRGMSPPPL DAPLSIIEKD PNAKDIKWED
901: DGVLVNSTDL DIDLF

Arabidopsis Description

PHOT2Phototropin-2 [Source:UniProtKB/Swiss-Prot;Acc:P93025]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.