CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX79801
CDX83459
CDX86029
CDX99153
CDY17911
CDY44256

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G25250.1	CDX79801	AT2G43790.1	21276203
AT3G25250.1	CDX83459	AT2G43790.1	21276203
AT3G25250.1	CDY17911	AT2G43790.1	21276203
AT3G25250.1	CDY44256	AT2G43790.1	21276203
AT3G25250.1	CDX86029	AT3G45640.1	21276203
AT3G25250.1	CDX99153	AT3G45640.1	21276203

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015120.1-P	Field mustard	cytosol	99.03	98.79
CDY00833	Canola	cytosol	96.13	97.07
AT3G25250.1	Thale cress	cytosol	84.5	82.9
GSMUA_AchrUn_...	Banana	cytosol	48.91	56.74
Solyc09g056430.2.1	Tomato	cytosol	52.06	54.29
PGSC0003DMT400016996	Potato	cytosol, plastid	53.75	53.37
KRH07383	Soybean	cytosol	53.51	50.92
KRH66186	Soybean	cytosol	53.27	50.46
TraesCS2A01G347400.1	Wheat	cytosol	52.06	47.05
Zm00001d003228_P001	Maize	cytosol, plastid	51.82	47.03
TraesCS2B01G365900.1	Wheat	cytosol	51.57	46.81
KRH46605	Soybean	cytosol	49.88	46.29
EES11030	Sorghum	cytosol	51.57	46.2
Os04t0488700-01	Rice	cytosol	51.57	46.1
HORVU0Hr1G005020.4	Barley	cytosol, mitochondrion	45.76	45.22
Zm00001d025735_P001	Maize	cytosol	51.09	45.18
Os02t0603000-00	Rice	cytosol, endoplasmic reticulum, plastid	48.18	44.52
HORVU6Hr1G054770.3	Barley	plastid	46.97	44.5
TraesCS6B01G244600.1	Wheat	plastid	46.97	44.39
TraesCS6D01G197300.1	Wheat	plastid	46.49	44.24
TraesCS6A01G214800.1	Wheat	cytosol	46.25	44.11
Zm00001d017533_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion, vacuole	33.17	44.05
GSMUA_Achr9P07870_001	Banana	plastid	49.64	43.62
Zm00001d017135_P001	Maize	cytosol	45.28	42.79
CDY25216	Canola	cytosol	36.56	39.74
CDY22830	Canola	cytosol, plastid	36.32	39.47
EES07111	Sorghum	plastid	45.76	37.95
CDY19600	Canola	plastid	36.8	37.72
CDY06386	Canola	nucleus, plastid	36.56	37.66
CDY71460	Canola	cytosol	20.58	34.84
CDY68493	Canola	cytosol	20.58	34.84
CDX99190	Canola	cytosol	21.31	30.56
CDX77857	Canola	cytosol	29.3	16.6
CDY02797	Canola	cytosol	32.45	14.6
CDY43878	Canola	cytosol	32.2	14.57
CDY62690	Canola	cytosol	32.2	14.55
CDY32722	Canola	cytosol	32.2	14.47
CDY58574	Canola	cytosol	32.2	14.46
CDX88659	Canola	cytosol	32.2	14.39
CDY30927	Canola	cytosol	28.81	12.71
CDY70398	Canola	nucleus, plastid	0.24	0.34

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	GO:A0A078GRT7	UniProt:A0A078GRT7	InterPro:AGC-kinase_C
EnsemblPlants:CDY27899	ProteinID:CDY27899	ProteinID:CDY27899.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00038767001	InterPro:IPR000719	InterPro:IPR000961	InterPro:Kinase-like_dom_sf	PFAM:PF00069
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51285	PANTHER:PTHR24351	PANTHER:PTHR24351:SF172	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE1ACC	SEG:seg	:

Description

BnaA07g04890DBnaA07g04890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GRT7]

Coordinates

chrLK032211:-:384213..385782

Molecular Weight (calculated)

46847.5 Da

IEP (calculated)

5.591

GRAVY (calculated)

-0.517

Length

413 amino acids

Sequence
(BLAST)

001: MQSPTLDFNR LEVLSLLGRG AKGVVFLVKD KEDDKQLALK VILREAIEKK KKTTKKDEYR RVSFEQEVLS RFDHPLFPSL HGVISTDKVI GYAIDYCPGK
101: NLNSLRIMQS ESMFSDEIIR FYAAELVLAF EYLHNQGIVY RDLKPDNVMI QDNGHLMLVD FDLSTNLPPR TPSPSTETTP SPGRRKKRLF RFVSFCSSRI
201: SSEEESNSMR LSSSSSSTLA VSDSSGEKSN SFVGTEEYVA PEVITGGGHD FAVDWWSLGV VLYEMLYGTT PFRGSNRKET FFRILSKPPN LVGETTSLRD
301: LIRRLLEKDP SRRISVEEIK GHEFFRGVDW EKVLLVSRPP YIPALDDGGD QGKDGNTKMD VENIVQEIFA ARDEREKQKD DNSNADMKIK GGEWVKGLNN
401: NNDLESDNNF LVF

Best Arabidopsis Sequence Match ( AT3G25250.1 )
(BLAST)

001: MLEGDEKQSR ALDFNRLEVL SLLGRGAKGV VFLVRDDDAK LLALKVILKE AIEKKKKGRE SEDDEYKRVS FEQGVLSRFD HPLFPSLHGV LATDKVIGYA
101: IDYCPGQNLN SLRKMQSESM FSDEIIRFYA AELVLALDYL HNQGIVYRDL KPDNVMIQEN GHLMLIDFDL STNLAPRTPQ PSPSLSKPSP TMKRKKRLFR
201: FTSFCNSGIS PQESISVHSS STLAVSDSSG EKSNSFVGTE EYVAPEVISG DGHDFAVDWW SLGVVLYEML YGATPFRGSN RKETFYRILS KPPNLTGETT
301: SLRDLIRRLL EKDPSRRINV EEIKGHDFFR GVDWEKVILV SRPPYIPAPD DGGDKGTDVN TKMDVENIVQ EIFAARQERE KQSGDNNKNA NMKIKDNTSG
401: EWVKGLNNNH DLESDNNFLV F

Arabidopsis Description

OXI1Serine/threonine-protein kinase OXI1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSF1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.