CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77857	Canola	cytosol	75.53	96.98
Bra019474.1-P	Field mustard	nucleus, plastid	95.3	92.63
AT3G45780.2	Thale cress	cytosol	92.09	86.55
CDY70398	Canola	nucleus, plastid	24.25	76.43
VIT_06s0004g03700.t01	Wine grape	cytosol, plastid	74.25	69.22
KRH22966	Soybean	nucleus, plastid	72.22	68.84
GSMUA_Achr4P30620_001	Banana	cytosol	67.84	68.57
Os12t0101800-02	Rice	mitochondrion	48.72	68.26
Zm00001d044599_P001	Maize	cytosol, nucleus, plastid	66.35	68.17
KRH10351	Soybean	nucleus, plastid	69.77	67.88
EES15492	Sorghum	cytosol	66.13	67.8
HORVU5Hr1G049160.8	Barley	cytosol	66.03	67.25
Solyc11g072710.1.1	Tomato	plastid	72.86	67.06
PGSC0003DMT400065251	Potato	cytosol	72.86	66.8
TraesCS5A01G157000.1	Wheat	cytosol	65.6	66.74
KRH24973	Soybean	cytosol	69.66	66.73
TraesCS5D01G162400.1	Wheat	cytosol	65.81	66.59
Os11t0102200-00	Rice	cytosol, plasma membrane, plastid	64.53	65.58
TraesCS5B01G155200.4	Wheat	cytosol	65.6	64.23
GSMUA_Achr7P10360_001	Banana	cytosol	65.92	64.2
CDY62690	Canola	cytosol	56.84	58.21
CDY43878	Canola	cytosol	56.73	58.16
CDY58574	Canola	cytosol	56.94	57.93
CDX88659	Canola	cytosol	56.62	57.36
CDY02797	Canola	cytosol	56.09	57.19
CDY32722	Canola	cytosol	56.09	57.13
CDY68493	Canola	cytosol	10.15	38.93
CDY71460	Canola	cytosol	9.94	38.11
CDX99190	Canola	cytosol	10.79	35.07
CDY22830	Canola	cytosol, plastid	14.1	34.74
CDY25216	Canola	cytosol	14.1	34.74
CDY06386	Canola	nucleus, plastid	14.21	33.17
CDY19600	Canola	plastid	14.1	32.75
CDY00833	Canola	cytosol	12.71	29.1
CDY27899	Canola	cytosol	12.71	28.81

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	MapMan:20.5.1	MapMan:26.1.2.2.1	Gene3D:3.30.200.20	Gene3D:3.30.450.20
GO:A0A078H0C1	UniProt:A0A078H0C1	EnsemblPlants:CDY30927	ProteinID:CDY30927	ProteinID:CDY30927.1	GO:GO:0000155
GO:GO:0000160	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0023014	GO:GO:0038023	EnsemblPlantsGene:GSBRNA2T00046474001
InterPro:IPR000014	InterPro:IPR000700	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:PAC	InterPro:PAS
InterPro:PAS-assoc_C	InterPro:PAS-like_dom_sf	PFAM:PF00069	PFAM:PF13426	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS50112	PFscan:PS50113	PANTHER:PTHR24351	PANTHER:PTHR24351:SF173	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00086	SMART:SM00091	SMART:SM00220	SUPFAM:SSF55785	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	TIGRFAMs:TIGR00229	UniParc:UPI0004EE5C34	SEG:seg	:	:

Description

BnaA06g19860DBnaA06g19860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0C1]

Coordinates

chrLK032264:-:25189..33974

Molecular Weight (calculated)

105110.0 Da

IEP (calculated)

7.978

GRAVY (calculated)

-0.635

Length

936 amino acids

Sequence
(BLAST)

001: MEPTEKPSIK PSSRTLPRDT RGSLEVFNPS TFPTRPDNPD PSPEKISKKT ITTEKPQVAA VAAEQRAAEW GLVLKTDTKT GKPQGTSQRN SSNSCRSSGE
101: MSDGDVAGGR GGIPRVSEDL KDALSTFQQT FVVSDATKPD YPIMYASAGF FNMTGYTSKE VVGRNCRFLQ GSGTDADELA KIRESLAAGN NYCGRLLNYK
201: KDGTSFWNLL TIAPIKDESG KVLKFIGMQV EVSKHTEGAK EKTLRPNGLP ESLIRYDARQ KDMATNSVTE LVEAVKRPRA LSESTHSHPF KRKSESDELP
301: AKPGRRMSEN VVPSGRRNSG GGRRNSMQRI NENPEKKPAK SSRLSFMGMK KKGQSQDESL EDGFIEYGEE DDEISDRDER PESVDDKVRQ KEMRKGMDLA
401: TTLERIEKNF VITDPRLPDN PIIFASDSFL ELTEYSREEI LGRNCRFLQG PETDPTTVKK IRAAIDNQTE VTVQLINYTK SGKKFWNIFH LQPMRDQKGE
501: VQYFIGVQLD GSKHVEPVRN VIEEVAVKEG EELVKKTAVN IDEAVRELPD ANMTPEDLWA NHSKIVHSKP HRKDSSSWKA IQKVLESGEQ IGLKHFRPVK
601: PLGSGDTGSV HLVELNGTDQ LFAMKAMDKT VMLNRNKVHR ARAEREILDL LDHPFLPALY ASFQTKTHIC LITDYYPGGE LFMLLDRQPR KVLKEDAVKF
701: YAAQVVASHS TSTFNFIETW DARIIYRDLK PENVLIQGNG DISLTDFDLS CLTSCRPQLL IPSIDEKKKK KQQKSQQSPV FMAEPMRASN SFVGTEEYIA
801: PEIITGAGHT SAVDWWALGI LMYEMLYGYT PFRGKTRQKT FANVLQKDLK FPASIPASLQ VKQLIFRLLQ RDPKKRLGCL EGANEVKNHS FFKGINWALI
901: RCTTPPELET PIFPGEAENG ENVVDPELED LQTSVF

Best Arabidopsis Sequence Match ( AT3G45780.1 )
(BLAST)

001: MEPTEKPSTK PSSRTLPRDT RGSLEVFNPS TQLTRPDNPV FRPEPPAWQN LSDPRGTSPQ PRPQQEPAPS NPVRSDQEIA VTTSWMALKD PSPETISKKT
101: ITAEKPQKSA VAAEQRAAEW GLVLKTDTKT GKPQGVGVRN SGGTENDPNG KKTTSQRNSQ NSCRSSGEMS DGDVPGGRSG IPRVSEDLKD ALSTFQQTFV
201: VSDATKPDYP IMYASAGFFN MTGYTSKEVV GRNCRFLQGS GTDADELAKI RETLAAGNNY CGRILNYKKD GTSFWNLLTI APIKDESGKV LKFIGMQVEV
301: SKHTEGAKEK ALRPNGLPES LIRYDARQKD MATNSVTELV EAVKRPRALS ESTNLHPFMT KSESDELPKK PARRMSENVV PSGRRNSGGG RRNSMQRINE
401: IPEKKSRKSS LSFMGIKKKS ESLDESIDDG FIEYGEEDDE ISDRDERPES VDDKVRQKEM RKGIDLATTL ERIEKNFVIT DPRLPDNPII FASDSFLELT
501: EYSREEILGR NCRFLQGPET DLTTVKKIRN AIDNQTEVTV QLINYTKSGK KFWNIFHLQP MRDQKGEVQY FIGVQLDGSK HVEPVRNVIE ETAVKEGEDL
601: VKKTAVNIDE AVRELPDANM TPEDLWANHS KVVHCKPHRK DSPPWIAIQK VLESGEPIGL KHFKPVKPLG SGDTGSVHLV ELVGTDQLFA MKAMDKAVML
701: NRNKVHRARA EREILDLLDH PFLPALYASF QTKTHICLIT DYYPGGELFM LLDRQPRKVL KEDAVRFYAA QVVVALEYLH CQGIIYRDLK PENVLIQGNG
801: DISLSDFDLS CLTSCKPQLL IPSIDEKKKK KQQKSQQTPI FMAEPMRASN SFVGTEEYIA PEIISGAGHT SAVDWWALGI LMYEMLYGYT PFRGKTRQKT
901: FTNVLQKDLK FPASIPASLQ VKQLIFRLLQ RDPKKRLGCF EGANEVKQHS FFKGINWALI RCTNPPELET PIFSGEAENG EKVVDPELED LQTNVF

Arabidopsis Description

PHOT1RPT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VFT4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.