Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| CDY06478 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G51170.1 | CDY06478 | AT4G14640.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22830 | Canola | cytosol, plastid | 98.16 | 98.16 |
| Bra018898.1-P | Field mustard | cytosol | 73.42 | 97.21 |
| AT1G51170.1 | Thale cress | plastid | 89.21 | 83.91 |
| CDY19600 | Canola | plastid | 75.53 | 71.22 |
| CDY06386 | Canola | nucleus, plastid | 75.0 | 71.07 |
| VIT_06s0004g01780.t01 | Wine grape | cytosol | 61.84 | 57.32 |
| GSMUA_Achr5P22330_001 | Banana | cytosol | 47.11 | 57.01 |
| KRH23156 | Soybean | cytosol | 57.63 | 56.74 |
| KRH29689 | Soybean | cytosol | 60.79 | 56.2 |
| Solyc11g061720.1.1 | Tomato | cytosol | 58.68 | 55.47 |
| KRH24685 | Soybean | cytosol | 60.26 | 54.65 |
| PGSC0003DMT400054224 | Potato | cytosol | 58.42 | 53.88 |
| GSMUA_Achr7P02080_001 | Banana | cytosol, mitochondrion | 49.47 | 47.47 |
| Os08t0504800-01 | Rice | cytosol | 50.53 | 45.39 |
| TraesCS7A01G244900.1 | Wheat | cytosol | 51.32 | 45.35 |
| TraesCS7D01G243600.1 | Wheat | cytosol | 50.79 | 45.2 |
| TraesCS7B01G146500.1 | Wheat | cytosol | 50.79 | 45.09 |
| EER99080 | Sorghum | cytosol, nucleus, peroxisome | 51.84 | 44.98 |
| Zm00001d020927_P001 | Maize | cytosol | 51.58 | 44.55 |
| TraesCS5A01G263600.1 | Wheat | cytosol | 51.05 | 44.19 |
| TraesCS5B01G263000.1 | Wheat | cytosol | 50.79 | 43.86 |
| Zm00001d006017_P001 | Maize | cytosol | 50.53 | 43.84 |
| Os09t0486700-01 | Rice | cytosol | 51.84 | 43.3 |
| Zm00001d031426_P001 | Maize | cytosol | 48.95 | 42.08 |
| EES15407 | Sorghum | cytosol | 48.68 | 41.76 |
| HORVU7Hr1G050240.1 | Barley | mitochondrion | 51.32 | 41.49 |
| TraesCS5D01G271200.1 | Wheat | cytosol | 50.79 | 41.24 |
| TraesCS7A01G426500.1 | Wheat | cytosol | 14.47 | 41.04 |
| HORVU5Hr1G072930.1 | Barley | mitochondrion | 49.47 | 40.43 |
| TraesCS5A01G192800.1 | Wheat | cytosol | 13.95 | 39.26 |
| CDY27899 | Canola | cytosol | 39.74 | 36.56 |
| CDY00833 | Canola | cytosol | 38.68 | 35.94 |
| CDY68493 | Canola | cytosol | 22.63 | 35.25 |
| CDY71460 | Canola | cytosol | 22.37 | 34.84 |
| CDX99190 | Canola | cytosol | 23.68 | 31.25 |
| CDX77857 | Canola | cytosol | 34.21 | 17.83 |
| CDX88659 | Canola | cytosol | 36.05 | 14.83 |
| CDY58574 | Canola | cytosol | 35.79 | 14.78 |
| CDY62690 | Canola | cytosol | 35.26 | 14.66 |
| CDY02797 | Canola | cytosol | 35.26 | 14.6 |
| CDY43878 | Canola | cytosol | 35.0 | 14.57 |
| CDY32722 | Canola | cytosol | 35.0 | 14.47 |
| CDY30927 | Canola | cytosol | 34.74 | 14.1 |
| CDY70398 | Canola | nucleus, plastid | 0.53 | 0.67 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.6.5 | Gene3D:3.30.200.20 | GO:A0A078GIK6 | UniProt:A0A078GIK6 | InterPro:AGC-kinase_C |
| EnsemblPlants:CDY25216 | ProteinID:CDY25216 | ProteinID:CDY25216.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00029178001 | InterPro:IPR000719 | InterPro:IPR000961 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 |
| ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PFscan:PS51285 | PANTHER:PTHR24351 | PANTHER:PTHR24351:SF107 |
| InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0004EC712C |
| SEG:seg | : | : | : | : | : |
Description
BnaC06g04410DBnaC06g04410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GIK6]
Coordinates
chrLK032170:-:455986..457491
Molecular Weight (calculated)
43200.5 Da
IEP (calculated)
9.068
GRAVY (calculated)
-0.463
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: METSATKLDL DQIRALKLLG KGATGTVFLV HDSVSDSSAS SPFALKLVDK ASASSLRRAK WETQILRRLS DEPNPFLPRL LATSESSEFF AWAIPYCSGG
101: DLNVLRHRQN DGVFSSSVIK FYLAEILCAL DHLHSMGIAY RDLKPENILL QESGHVTLTD FDLSCSLNKP TRPEFYLSDP EPDPNRKRNL RFFRQKKKTK
201: SARVNPITRR RMSFSGGERS NSFVGTDEYI SPEVIRGDGH DFAVDWWALG VLTYEMMYGA TPFKGRSKKE TFRNVLMKEP EFPGKPSDLT DLIRRLLVKD
301: PTRRLGFRRG AAEIKEHAFF RGVKWEILTE VLRPPFIPLR DDGESTENVT ASGFGIKEYF EKLRTPLPHE CPENNPFVDF
101: DLNVLRHRQN DGVFSSSVIK FYLAEILCAL DHLHSMGIAY RDLKPENILL QESGHVTLTD FDLSCSLNKP TRPEFYLSDP EPDPNRKRNL RFFRQKKKTK
201: SARVNPITRR RMSFSGGERS NSFVGTDEYI SPEVIRGDGH DFAVDWWALG VLTYEMMYGA TPFKGRSKKE TFRNVLMKEP EFPGKPSDLT DLIRRLLVKD
301: PTRRLGFRRG AAEIKEHAFF RGVKWEILTE VLRPPFIPLR DDGESTENVT ASGFGIKEYF EKLRTPLPHE CPENNPFVDF
001: METRPSSSSS LSPATNLNLD RLKVLKLLGK GATGTVFLVH DSVSDSSVSS PFALKLVDKS SASSLRRARW EIQILRRLSD DTNPNPFLPK LLASSESSEF
101: IAWALPYCSG GDLNVLRQRQ NDGVFSSSVI KFYLAEIVCA LDHLHTMGIA YRDLKPENIL LQESGHVTLT DFDLSCSLNK PTRPEFYHLS DPEPDPNPES
201: NLSHNKKSLR IFRQKKKKTK SARVNPITRR RLSFSGGERS NSFVGTDEYI SPEVIRGDGH DFAVDWWALG VLTYEMMYGE TPFKGRNKKE TFRNVLVKEP
301: EFAGKPSDLT DLIRRLLVKD PTKRFGFWRG AAEIKEHAFF KGVRWELLTE VLRPPFIPLR DDGDLTGKVT EESGFGIKEY FEKLKTPPLP LPHECSENNP
401: FVDF
101: IAWALPYCSG GDLNVLRQRQ NDGVFSSSVI KFYLAEIVCA LDHLHTMGIA YRDLKPENIL LQESGHVTLT DFDLSCSLNK PTRPEFYHLS DPEPDPNPES
201: NLSHNKKSLR IFRQKKKKTK SARVNPITRR RLSFSGGERS NSFVGTDEYI SPEVIRGDGH DFAVDWWALG VLTYEMMYGE TPFKGRNKKE TFRNVLVKEP
301: EFAGKPSDLT DLIRRLLVKD PTKRFGFWRG AAEIKEHAFF KGVRWELLTE VLRPPFIPLR DDGDLTGKVT EESGFGIKEY FEKLKTPPLP LPHECSENNP
401: FVDF
Arabidopsis Description
UNCSerine/threonine-protein kinase UCN [Source:UniProtKB/Swiss-Prot;Acc:Q9SYB9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.