CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 5
nucleus 3
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10351	Soybean	nucleus, plastid	92.16	94.07
KRH24973	Soybean	cytosol	76.68	77.07
VIT_06s0004g03700.t01	Wine grape	cytosol, plastid	76.07	74.4
CDX77857	Canola	cytosol	54.48	73.39
CDY30927	Canola	cytosol	68.84	72.22
GSMUA_Achr4P30620_001	Banana	cytosol	66.29	70.3
Bra019474.1-P	Field mustard	nucleus, plastid	68.84	70.2
AT3G45780.2	Thale cress	cytosol	70.98	69.98
Solyc11g072710.1.1	Tomato	plastid	72.4	69.91
PGSC0003DMT400065251	Potato	cytosol	72.3	69.54
Os12t0101800-02	Rice	mitochondrion	47.15	69.31
Zm00001d044599_P001	Maize	cytosol, nucleus, plastid	63.54	68.5
EES15492	Sorghum	cytosol	63.65	68.46
HORVU5Hr1G049160.8	Barley	cytosol	63.24	67.57
TraesCS5D01G162400.1	Wheat	cytosol	63.03	66.92
GSMUA_Achr7P10360_001	Banana	cytosol	64.97	66.39
TraesCS5A01G157000.1	Wheat	cytosol	62.12	66.3
Os11t0102200-00	Rice	cytosol, plasma membrane, plastid	61.3	65.36
TraesCS5B01G155200.4	Wheat	cytosol	63.03	64.75
KRH45318	Soybean	cytosol	11.2	61.11
KRH07591	Soybean	cytosol	56.72	56.26
KRH45326	Soybean	cytosol	45.42	54.66
KRH23156	Soybean	cytosol	14.26	36.27
KRH29689	Soybean	cytosol	14.56	34.79
KRH24685	Soybean	cytosol	14.66	34.37
KRH07383	Soybean	cytosol	14.05	31.8
KRH66186	Soybean	cytosol	13.85	31.19
KRH46605	Soybean	cytosol	13.75	30.34

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100817565	MapMan:18.4.6.5	MapMan:20.5.1	MapMan:26.1.2.2.1	Gene3D:3.30.200.20
Gene3D:3.30.450.20	EMBL:ACUP02008449	ncoils:Coil	EnsemblPlantsGene:GLYMA_13G330400	GO:GO:0000155	GO:GO:0000160
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0023014	GO:GO:0035556	GO:GO:0038023	UniProt:I1M4Q3	InterPro:IPR000014
InterPro:IPR000700	InterPro:IPR000719	EnsemblPlants:KRH22966	ProteinID:KRH22966	ProteinID:KRH22966.1	InterPro:Kinase-like_dom_sf
InterPro:PAC	InterPro:PAS	InterPro:PAS-assoc_C	InterPro:PAS-like_dom_sf	PFAM:PF00069	PFAM:PF13426
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50112	PFscan:PS50113	PANTHER:PTHR24351
PANTHER:PTHR24351:SF173	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00086	SMART:SM00091	SMART:SM00220
SUPFAM:SSF55785	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGRFAMs:TIGR00229	UniParc:UPI000233AC83	SEG:seg

Description

hypothetical protein

Coordinates

chr13:+:42494484..42509495

Molecular Weight (calculated)

110198.0 Da

IEP (calculated)

7.620

GRAVY (calculated)

-0.717

Length

982 amino acids

Sequence
(BLAST)

001: MEQSEKSPTK ISPLRSSFPR DPRGSLEVFN PNTSALASTS TNARVRSQPL WKSWTESEEP RNEIAATSWM AINPAAGESG EAAQRAAEWG LVLRTDTETG
101: KPQGVAVRNS GGEEPNAAKL AAAASSSRKN SQNSARTSGD SSDGGGGGGG IPRISEDVMG ALSAFQQTFV VSDATKADYP ILYASAGFFK MTGYKSKEVI
201: GRNCRFLQGA DTDPEDVAKI REALQAGKIY CGRLLNYKKD GTPFWNLLTI SPIKDEDGKV LKFIGMQVEV SKHTEGSKEK TLRPNGLPES LIRYDARQKE
301: KATSSVTELL QAMKRPRALS ESASRPSIRK SGSRSSDEEK LEQEQEDDKE KAQKTLRRIS ESGASFGRKS EGSGNRISME RISELPENKH RNSQRRSFMG
401: FRRKSQSNDE SMDSEVIEDE SSESEDDERP NSFELDDKEK QREKRKGLDL ATTLERIEKN FVITDPRLPD NPIIFASDSF LELTEYSREE ILGRNCRFLQ
501: GPETDPATVN KIREAIDNQT EVTVQLINYT KSGKKFWNLF HLQPMRDQKG EVQYFIGVQL DGSQHVEPLH NCIAEDTAKE GEQLVKQTAE NVDEAVRDLP
601: DANKKPDDLW TNHSKTVHPK PHRKDDPAWK AIQKVLESGE QIGLKHFRPI KPLGSGDTGS VHLVELRGTG QYFAMKAMDK GVMLNRNKVH RACAEREILD
701: KLDHPFLPAL YASFQTKTHV CLITDYCPGG ELFLLLDRQP TKVLKEDAVR FYAAEVVIVL EYLHCQGIIY RDLKPENVLL QSNGHVSLTD FDLSCLTSSK
801: PQLIIPATNS KKKKKKKQKS QEVPMFMAEP MRASNSFVGT EEYIAPEIIT GSGHTSAVDW WALGILIYEM LYGYTPFRGK TRQKTFANIL HKDLKFPKSK
901: PVSLQGKQLI YWLLQRDPKD RLGSREGANE IKRHPFFRGV NWALVRCMKP PELDAPLLPE TEEEKEAKDI HPGLEDLQTN IF

Best Arabidopsis Sequence Match ( AT5G58140.1 )
(BLAST)

001: MERPRAPPSP LNDAESLSER RSLEIFNPSS GKETHGSTSS SSKPPLDGNN KGSSSKWMEF QDSAKITERT AEWGLSAVKP DSGDDGISFK LSSEVERSKN
101: MSRRSSEEST SSESGAFPRV SQELKTALST LQQTFVVSDA TQPHCPIVYA SSGFFTMTGY SSKEIVGRNC RFLQGPDTDK NEVAKIRDCV KNGKSYCGRL
201: LNYKKDGTPF WNLLTVTPIK DDQGNTIKFI GMQVEVSKYT EGVNDKALRP NGLSKSLIRY DARQKEKALD SITEVVQTIR HRKSQVQESV SNDTMVKPDS
301: STTPTPGRQT RQSDEASKSF RTPGRVSTPT GSKLKSSNNR HEDLLRMEPE ELMLSTEVIG QRDSWDLSDR ERDIRQGIDL ATTLERIEKN FVISDPRLPD
401: NPIIFASDSF LELTEYSREE ILGRNCRFLQ GPETDQATVQ KIRDAIRDQR EITVQLINYT KSGKKFWNLF HLQPMRDQKG ELQYFIGVQL DGSDHVEPLQ
501: NRLSERTEMQ SSKLVKATAT NVDEAVRELP DANTRPEDLW AAHSKPVYPL PHNKESTSWK AIKKIQASGE TVGLHHFKPI KPLGSGDTGS VHLVELKGTG
601: ELYAMKAMEK TMMLNRNKAH RACIEREIIS LLDHPFLPTL YASFQTSTHV CLITDFCPGG ELFALLDRQP MKILTEDSAR FYAAEVVIGL EYLHCLGIVY
701: RDLKPENILL KKDGHIVLAD FDLSFMTTCT PQLIIPAAPS KRRRSKSQPL PTFVAEPSTQ SNSFVGTEEY IAPEIITGAG HTSAIDWWAL GILLYEMLYG
801: RTPFRGKNRQ KTFANILHKD LTFPSSIPVS LVGRQLINTL LNRDPSSRLG SKGGANEIKQ HAFFRGINWP LIRGMSPPPL DAPLSIIEKD PNAKDIKWED
901: DGVLVNSTDL DIDLF

Arabidopsis Description

PHOT2Phototropin-2 [Source:UniProtKB/Swiss-Prot;Acc:P93025]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.