Factsheet for HORVU6Hr1G054770.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, endoplasmic reticulum, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
WoLF PSORT:	endoplasmic reticulum
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G094240.1
HORVU4Hr1G008590.1
HORVU4Hr1G057200.4
HORVU7Hr1G023760.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G25250.1	HORVU7Hr1G023760.2	AT2G43790.1	21276203
AT3G25250.1	HORVU4Hr1G057200.4	AT3G45640.1	21276203
AT4G13000.1	HORVU1Hr1G094240.1	AT2G41970.1	21798944
AT4G13000.1	HORVU4Hr1G008590.1	AT2G41970.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G214800.1	Wheat	cytosol	94.95	95.61
TraesCS6D01G197300.1	Wheat	plastid	94.72	95.16
TraesCS6B01G244600.1	Wheat	plastid	94.5	94.28
Zm00001d017135_P001	Maize	cytosol	72.48	72.31
Os02t0603000-00	Rice	cytosol, endoplasmic reticulum, plastid	74.08	72.26
EES07111	Sorghum	plastid	72.94	63.86
GSMUA_AchrUn_...	Banana	cytosol	46.56	57.02
HORVU0Hr1G005020.4	Barley	cytosol, mitochondrion	52.06	54.31
AT4G13000.1	Thale cress	cytosol	42.43	49.73
CDY27899	Canola	cytosol	44.5	46.97
CDY00833	Canola	cytosol	44.04	46.94
Bra015120.1-P	Field mustard	cytosol	44.5	46.86
GSMUA_Achr9P07870_001	Banana	plastid	48.17	44.68
AT3G25250.1	Thale cress	cytosol	43.12	44.66
Solyc09g056430.2.1	Tomato	cytosol	40.14	44.19
PGSC0003DMT400016996	Potato	cytosol, plastid	41.97	43.99
KRH07383	Soybean	cytosol	42.2	42.4
KRH66186	Soybean	cytosol	41.74	41.74
KRH46605	Soybean	cytosol	40.83	40.0
HORVU5Hr1G072930.1	Barley	mitochondrion	37.16	34.84
HORVU7Hr1G050240.1	Barley	mitochondrion	35.55	32.98
HORVU3Hr1G068260.1	Barley	cytosol	2.52	16.18
HORVU5Hr1G049160.8	Barley	cytosol	29.13	13.82

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	UniProt:A0A287U847	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:HORVU6Hr1G054770	EnsemblPlants:HORVU6Hr1G054770.3	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF72	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000B47E1F6	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:347811467..347812933

Molecular Weight (calculated)

46183.8 Da

IEP (calculated)

9.185

GRAVY (calculated)

-0.179

Length

436 amino acids

Sequence
(BLAST)

001: MVSTAPMPPP PPQLSLADLR AMSVLGHGAR GVVFHVVPVV AAAAGGGCSA DQPMALKAMS RAAARQKSAA AGPAPGAGGD GLRRIWFERD VLLAVRHPLL
101: PSLRGVVATD AVVGFAIDRC AGGDLNSLRR RQAGLAFSDA AIRFYAAELV LVLEHLHGLG VVYRDLKPDN VLIQGSGHIM LVDFDLSTSL PPPLPPPPPD
201: ANSPSPSSSL SPNSARRGKR KNNKTLVFGH FSSRQAASPE SSSSSSTTSR KASPASSSSC CSSPGARTTP AKSNSFVGTE YYVAPEVVAG SGHDYAVDWW
301: GLGVVLYEML YGRTPFRGRS RRETFQRVLT AQPELPGEPT PLRDLIARLL EKDSGKRLGA NGVKRHAFFR GVCWDRVLDV ARPPFIPVPD DDSAGSGAEG
401: ETLDVEKVVR ETFALSATRA SEEKHDGGDS DFSIFF

Best Arabidopsis Sequence Match ( AT1G51170.1 )
(BLAST)

001: METRPSSSSS LSPATNLNLD RLKVLKLLGK GATGTVFLVH DSVSDSSVSS PFALKLVDKS SASSLRRARW EIQILRRLSD DTNPNPFLPK LLASSESSEF
101: IAWALPYCSG GDLNVLRQRQ NDGVFSSSVI KFYLAEIVCA LDHLHTMGIA YRDLKPENIL LQESGHVTLT DFDLSCSLNK PTRPEFYHLS DPEPDPNPES
201: NLSHNKKSLR IFRQKKKKTK SARVNPITRR RLSFSGGERS NSFVGTDEYI SPEVIRGDGH DFAVDWWALG VLTYEMMYGE TPFKGRNKKE TFRNVLVKEP
301: EFAGKPSDLT DLIRRLLVKD PTKRFGFWRG AAEIKEHAFF KGVRWELLTE VLRPPFIPLR DDGDLTGKVT EESGFGIKEY FEKLKTPPLP LPHECSENNP
401: FVDF

Arabidopsis Description

UNCSerine/threonine-protein kinase UCN [Source:UniProtKB/Swiss-Prot;Acc:Q9SYB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.