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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc01g008950.2.1
Solyc03g005240.1.1
Solyc06g053930.2.1
Solyc10g077010.1.1
Solyc10g081170.1.1
Solyc11g072240.1.1
Solyc12g099990.1.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G74740.1 Solyc01g008950.2.1 AT2G41090.1 17360592
AT1G74740.1 Solyc10g077010.1.1 AT2G41090.1 17360592
AT1G74740.1 Solyc10g081170.1.1 AT2G41090.1 17360592
AT1G74740.1 Solyc11g072240.1.1 AT2G41090.1 17360592
AT1G74740.1 Solyc12g099990.1.1 AT2G41090.1 17360592
AT1G74740.1 Solyc01g008950.2.1 AT2G41100.1 17360592
AT1G74740.1 Solyc10g077010.1.1 AT2G41100.1 17360592
AT1G74740.1 Solyc10g081170.1.1 AT2G41100.1 17360592
AT1G74740.1 Solyc11g072240.1.1 AT2G41100.1 17360592
AT1G74740.1 Solyc12g099990.1.1 AT2G41100.1 17360592
AT1G74740.1 Solyc03g005240.1.1 AT4G14640.1 17360592
AT1G74740.1 Solyc06g053930.2.1 AT4G14640.1 17360592
AT1G74740.1 Solyc01g008950.2.1 AT5G21274.1 17360592
AT1G74740.1 Solyc10g077010.1.1 AT5G21274.1 17360592
AT1G74740.1 Solyc10g081170.1.1 AT5G21274.1 17360592
AT1G74740.1 Solyc11g072240.1.1 AT5G21274.1 17360592
AT1G74740.1 Solyc12g099990.1.1 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400034291 Potato cytosol 99.44 99.44
VIT_17s0000g05520.t01 Wine grape cytosol 68.96 86.08
GSMUA_Achr2P17730_001 Banana cytosol 62.27 83.13
KRH63420 Soybean cytosol 83.46 80.76
AT1G74740.1 Thale cress cytosol 81.04 80.59
KRH54494 Soybean cytosol 82.16 80.22
KRH03406 Soybean cytosol 80.48 80.04
KRH56973 Soybean cytosol 80.11 79.96
AT1G18890.1 Thale cress cytosol, plastid 80.86 79.82
Bra015896.1-P Field mustard cytosol 80.67 79.49
CDY45391 Canola cytosol 80.48 79.3
CDX81903 Canola cytosol, plastid 79.93 79.19
Bra031055.1-P Field mustard cytosol, plastid 78.07 79.1
CDX73108 Canola cytosol 80.3 78.98
CDY21691 Canola cytosol, plastid 79.93 78.61
Bra025696.1-P Field mustard cytosol, plastid 71.19 72.54
CDY26714 Canola cytosol 80.11 70.77
CDY19259 Canola cytosol, plastid 80.3 70.47
Solyc01g008440.2.1 Tomato cytosol 66.54 67.17
Solyc10g079130.1.1 Tomato nucleus 65.43 67.05
Solyc09g005550.2.1 Tomato cytosol 65.61 66.73
TraesCS4D01G027600.1 Wheat plastid 70.63 66.67
TraesCS4A01G283400.1 Wheat plastid 70.45 66.61
Os03t0688300-01 Rice plasma membrane 70.26 65.85
Zm00001d013527_P002 Maize cytosol, plastid 71.19 65.47
EER93646 Sorghum plastid 71.19 65.36
Solyc11g065660.1.1 Tomato cytosol 64.68 65.29
TraesCS4B01G030100.1 Wheat plastid 70.82 63.5
HORVU4Hr1G004540.20 Barley plastid 69.7 62.29
Solyc06g073350.2.1 Tomato plastid 55.2 55.41
Solyc06g008830.1.1 Tomato cytosol 10.22 53.92
Solyc08g062990.1.1 Tomato cytosol 13.75 52.11
Solyc10g050080.1.1 Tomato cytosol 13.75 52.11
Solyc05g041110.1.1 Tomato nucleus 10.59 50.89
Solyc10g061860.1.1 Tomato cytosol 13.01 50.0
Solyc04g049100.1.1 Tomato cytosol 13.2 50.0
Solyc12g005030.1.1 Tomato cytosol 30.48 45.56
Solyc10g078390.1.1 Tomato cytosol 37.55 35.19
Solyc02g083850.2.1 Tomato plastid 36.99 34.91
Solyc03g033540.2.1 Tomato extracellular 36.25 34.51
Solyc02g065070.2.1 Tomato cytosol 37.73 34.35
Solyc02g090510.2.1 Tomato nucleus 38.48 34.1
Solyc01g108400.2.1 Tomato cytosol 36.62 33.5
Solyc03g082500.2.1 Tomato nucleus 35.13 31.61
Solyc01g096350.2.1 Tomato cytosol, nucleus 34.57 31.58
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.4MapMan:25.1.2.1Gene3D:3.30.200.20InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0004683GO:GO:0005488GO:GO:0005509GO:GO:0005515GO:GO:0005516GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005886
GO:GO:0006464GO:GO:0006468GO:GO:0006950GO:GO:0006970GO:GO:0007154GO:GO:0007165
GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009628GO:GO:0009719GO:GO:0009738
GO:GO:0009931GO:GO:0009987GO:GO:0010152GO:GO:0016020GO:GO:0016301GO:GO:0016740
GO:GO:0018105GO:GO:0019538GO:GO:0035556GO:GO:0046777GO:GO:1902584InterPro:IPR000719
InterPro:IPR002048UniProt:K4BKJ2InterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF13499ScanProsite:PS00018
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50222PANTHER:PTHR24349PANTHER:PTHR24349:SF167
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00054SMART:SM00220SUPFAM:SSF47473SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASEnsemblPlantsGene:Solyc03g113390.2EnsemblPlants:Solyc03g113390.2.1UniParc:UPI0002767C17SEG:seg:
Description
No Description!
Coordinates
chr3:+:63540030..63545517
Molecular Weight (calculated)
60940.5 Da
IEP (calculated)
6.852
GRAVY (calculated)
-0.385
Length
538 amino acids
Sequence
(BLAST)
001: MGNCNACIRP EEASKTDPQT KPKKPRERRP NPYSGSPAPI RVLKDFIPKT RISDKYILGR ELGRGEFGVT YLCTDRETRE ALACKSISKK KLRTAVDIED
101: VRREVAIMSS LPDHPNIVKL RATYEDNEAV HLVMELCEGG ELFDRIVARG HYSERAAAGV ARTVAEVVRM CHANGVMHRD LKPENFLFAN KKEHSALKAI
201: DFGLSVFFKP GERFSEIVGS PYYMAPEVLK RNYGPEVDIW SAGVILYILL CGVPPFWAET EQGVALSILR GVIDFKREPW PQVSEKAKSL VRQMLEPDPK
301: KRLTAQQVLD HPWIQNAKKA SNVPLGDIVR TRLKQFSIMN RFKKKALRVI AEHLKLEEIE VIREMFALMD SDGDGKITYD ELKTGLRKVG SQLAEAEMKL
401: LMDVADVDGN GVLDYGEFVA VIIHLQRMEN DEHFRRAFMF FDKDGSGYIE LDELREALAD ESGACDTDVV NEIMREVDTD KDGQISFEEF VGMMKAGTDW
501: RKASRQYSRE RFKSLSVNLM KDGSLQLQDV LSGQTVIV
Best Arabidopsis Sequence Match ( AT1G18890.1 )
(BLAST)
001: MGNCNACVRP DSKESKPSSK PKKPNRDRKL NPFAGDFTRS PAPIRVLKDV IPMSNQTQIS DKYILGRELG RGEFGITYLC TDRETHEALA CKSISKRKLR
101: TAVDIEDVRR EVAIMSTLPE HPNVVKLKAS YEDNENVHLV MELCEGGELF DRIVARGHYT ERAAAAVART IAEVVMMCHS NGVMHRDLKP ENFLFANKKE
201: NSPLKAIDFG LSVFFKPGDK FTEIVGSPYY MAPEVLKRDY GPGVDVWSAG VIIYILLCGV PPFWAETEQG VALAILRGVL DFKRDPWPQI SESAKSLVKQ
301: MLDPDPTKRL TAQQVLAHPW IQNAKKAPNV PLGDIVRSRL KQFSMMNRFK KKVLRVIAEH LSIQEVEVIK NMFSLMDDDK DGKITYPELK AGLQKVGSQL
401: GEPEIKMLME VADVDGNGFL DYGEFVAVII HLQKIENDEL FKLAFMFFDK DGSTYIELDE LREALADELG EPDASVLSDI MREVDTDKDG RINYDEFVTM
501: MKAGTDWRKA SRQYSRERFK SLSINLMKDG SLHLHDALTG QTVPV
Arabidopsis Description
CPK10Calcium-dependent protein kinase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V8]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.