Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400021055 | Potato | cytosol | 98.67 | 98.86 |
VIT_08s0007g08300.t01 | Wine grape | cytosol | 84.38 | 84.22 |
KRG95275 | Soybean | cytosol | 83.05 | 81.5 |
KRH66958 | Soybean | cytosol, mitochondrion | 82.86 | 81.46 |
KRH33161 | Soybean | cytosol | 80.19 | 79.73 |
Solyc11g065660.1.1 | Tomato | cytosol | 80.38 | 79.17 |
KRH71977 | Soybean | cytosol | 78.67 | 78.67 |
Solyc01g008440.2.1 | Tomato | cytosol | 79.24 | 78.05 |
AT3G57530.1 | Thale cress | cytosol | 78.29 | 76.39 |
CDY33817 | Canola | cytosol | 77.9 | 76.02 |
CDX67695 | Canola | cytosol | 77.52 | 75.93 |
Bra003287.1-P | Field mustard | cytosol | 77.71 | 75.84 |
GSMUA_Achr3P29750_001 | Banana | cytosol | 72.19 | 75.2 |
GSMUA_AchrUn_... | Banana | cytosol | 71.43 | 75.15 |
Bra007334.1-P | Field mustard | cytosol | 77.14 | 74.86 |
CDY06098 | Canola | cytosol | 77.14 | 74.86 |
GSMUA_Achr8P31440_001 | Banana | cytosol | 72.57 | 74.85 |
Zm00001d006621_P006 | Maize | cytosol | 76.76 | 74.77 |
TraesCS2B01G227000.1 | Wheat | cytosol | 77.14 | 74.59 |
TraesCS2A01G199700.1 | Wheat | cytosol | 77.14 | 74.59 |
AT2G41860.1 | Thale cress | cytosol | 75.24 | 74.53 |
CDY48773 | Canola | cytosol | 67.24 | 74.47 |
EER99568 | Sorghum | cytosol | 76.95 | 74.4 |
TraesCS2D01G207400.1 | Wheat | cytosol | 76.95 | 74.4 |
GSMUA_Achr4P06930_001 | Banana | cytosol | 68.76 | 74.28 |
CDX72022 | Canola | cytosol | 76.38 | 74.26 |
Os07t0568600-01 | Rice | cytosol, plasma membrane | 77.71 | 74.18 |
Zm00001d021835_P001 | Maize | cytosol | 76.0 | 74.03 |
CDY06900 | Canola | cytosol | 74.29 | 73.45 |
GSMUA_Achr4P13880_001 | Banana | cytosol | 73.71 | 73.3 |
Bra016909.1-P | Field mustard | cytosol | 74.1 | 73.26 |
Zm00001d011666_P001 | Maize | cytosol, plasma membrane | 49.52 | 73.24 |
CDX79906 | Canola | cytosol | 74.1 | 73.12 |
Bra004656.1-P | Field mustard | cytosol | 74.1 | 73.12 |
CDY14793 | Canola | cytosol | 67.81 | 72.95 |
GSMUA_Achr2P07790_001 | Banana | cytosol | 70.1 | 72.16 |
Zm00001d029018_P001 | Maize | plasma membrane | 48.76 | 72.11 |
Zm00001d029163_P001 | Maize | cytosol | 24.76 | 67.36 |
Solyc03g113390.2.1 | Tomato | cytosol | 67.05 | 65.43 |
Solyc09g005550.2.1 | Tomato | cytosol | 64.38 | 63.89 |
Zm00001d031188_P002 | Maize | cytosol | 45.33 | 59.06 |
Solyc06g073350.2.1 | Tomato | plastid | 58.48 | 57.28 |
Solyc06g008830.1.1 | Tomato | cytosol | 10.29 | 52.94 |
Solyc10g050080.1.1 | Tomato | cytosol | 14.29 | 52.82 |
Solyc08g062990.1.1 | Tomato | cytosol | 14.29 | 52.82 |
Solyc04g049100.1.1 | Tomato | cytosol | 13.71 | 50.7 |
Solyc10g061860.1.1 | Tomato | cytosol | 13.33 | 50.0 |
Solyc05g041110.1.1 | Tomato | nucleus | 10.29 | 48.21 |
Solyc12g005030.1.1 | Tomato | cytosol | 32.38 | 47.22 |
Zm00001d028016_P001 | Maize | cytosol | 38.67 | 46.14 |
Solyc02g083850.2.1 | Tomato | plastid | 40.0 | 36.84 |
Solyc03g033540.2.1 | Tomato | extracellular | 39.24 | 36.46 |
Solyc02g065070.2.1 | Tomato | cytosol | 40.19 | 35.7 |
Solyc10g078390.1.1 | Tomato | cytosol | 38.48 | 35.19 |
Solyc01g108400.2.1 | Tomato | cytosol | 38.67 | 34.52 |
Solyc02g090510.2.1 | Tomato | nucleus | 39.81 | 34.43 |
Solyc01g096350.2.1 | Tomato | cytosol, nucleus | 36.76 | 32.77 |
Solyc03g082500.2.1 | Tomato | nucleus | 36.95 | 32.44 |
Protein Annotations
Description
No Description!
Coordinates
chr10:-:60740409..60744010
Molecular Weight (calculated)
59633.2 Da
IEP (calculated)
6.256
GRAVY (calculated)
-0.534
Length
525 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNCCAVPKT SETEEKKRGK NKPNPFSVDY GHHGNGHKSY VLDNPTGTDI EATYELGREL GRGEFGVTYL STDKVSGEVY ACKSISKKKL RTRVDIEDVR
101: REVEIMKHLP KHPNIVTLKD TYEDDNAVHI VMELCEGGEL FDRIVARGHY TERAAAAVTR TIVEVIQMCH KHGVMHRDLK PENFLFENKK ETAPLKAIDF
201: GLSVFFKPGE RFNEIVGSPY YMAPEVLKRD YGPEVDVWSA GVILYILLCG VPPFWAETEQ GVAQAIIRSV VNFKRDPWPK VSDNAKDLVK KMLNPDPSQR
301: LTAQEVLDHP WIQNAKKAPN VSLGETVKAR LKQFSMMNKL KKRALRVIAE HLTVDEVAGI KEGFQLMDIS NKGKIDVNEL RVGLQKLGHQ IPESDVQILM
401: DVGDVDKDGF LDYGEFVAIS VHLRKMANEE HLKKAFDFFD RNQNGYIEIE ELREALDDEI ETNSEEVINA IMQDVDTDKD GRISYDEFST MMKAGTDWRK
501: ASRQYSRERY NSLSLKLMKD GSLQS
101: REVEIMKHLP KHPNIVTLKD TYEDDNAVHI VMELCEGGEL FDRIVARGHY TERAAAAVTR TIVEVIQMCH KHGVMHRDLK PENFLFENKK ETAPLKAIDF
201: GLSVFFKPGE RFNEIVGSPY YMAPEVLKRD YGPEVDVWSA GVILYILLCG VPPFWAETEQ GVAQAIIRSV VNFKRDPWPK VSDNAKDLVK KMLNPDPSQR
301: LTAQEVLDHP WIQNAKKAPN VSLGETVKAR LKQFSMMNKL KKRALRVIAE HLTVDEVAGI KEGFQLMDIS NKGKIDVNEL RVGLQKLGHQ IPESDVQILM
401: DVGDVDKDGF LDYGEFVAIS VHLRKMANEE HLKKAFDFFD RNQNGYIEIE ELREALDDEI ETNSEEVINA IMQDVDTDKD GRISYDEFST MMKAGTDWRK
501: ASRQYSRERY NSLSLKLMKD GSLQS
001: MGNCCGTAGS LAQNDNKPKK GRKKQNPFSI DYGLHHGGGD GGGRPLKLIV LNDPTGREIE SKYTLGRELG RGEFGVTYLC TDKETDDVFA CKSILKKKLR
101: TAVDIEDVRR EVEIMRHMPE HPNVVTLKET YEDEHAVHLV MELCEGGELF DRIVARGHYT ERAAAAVTKT IMEVVQVCHK HGVMHRDLKP ENFLFGNKKE
201: TAPLKAIDFG LSVFFKPGER FNEIVGSPYY MAPEVLKRNY GPEVDIWSAG VILYILLCGV PPFWAETEQG VAQAIIRSVL DFRRDPWPKV SENAKDLIRK
301: MLDPDQKRRL TAQQVLDHPW LQNAKTAPNV SLGETVRARL KQFTVMNKLK KRALRVIAEH LSDEEASGIR EGFQIMDTSQ RGKINIDELK IGLQKLGHAI
401: PQDDLQILMD AGDIDRDGYL DCDEFIAISV HLRKMGNDEH LKKAFAFFDQ NNNGYIEIEE LREALSDELG TSEEVVDAII RDVDTDKDGR ISYEEFVTMM
501: KTGTDWRKAS RQYSRERFNS ISLKLMQDAS LQVNGDTR
101: TAVDIEDVRR EVEIMRHMPE HPNVVTLKET YEDEHAVHLV MELCEGGELF DRIVARGHYT ERAAAAVTKT IMEVVQVCHK HGVMHRDLKP ENFLFGNKKE
201: TAPLKAIDFG LSVFFKPGER FNEIVGSPYY MAPEVLKRNY GPEVDIWSAG VILYILLCGV PPFWAETEQG VAQAIIRSVL DFRRDPWPKV SENAKDLIRK
301: MLDPDQKRRL TAQQVLDHPW LQNAKTAPNV SLGETVRARL KQFTVMNKLK KRALRVIAEH LSDEEASGIR EGFQIMDTSQ RGKINIDELK IGLQKLGHAI
401: PQDDLQILMD AGDIDRDGYL DCDEFIAISV HLRKMGNDEH LKKAFAFFDQ NNNGYIEIEE LREALSDELG TSEEVVDAII RDVDTDKDGR ISYEEFVTMM
501: KTGTDWRKAS RQYSRERFNS ISLKLMQDAS LQVNGDTR
Arabidopsis Description
CPK32Calcium-dependent protein kinase 32 [Source:UniProtKB/Swiss-Prot;Acc:Q6NLQ6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.