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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
nucleus: 28394025
msms PMID: 28394025 doi
AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400021055 Potato cytosol 98.67 98.86
VIT_08s0007g08300.t01 Wine grape cytosol 84.38 84.22
KRG95275 Soybean cytosol 83.05 81.5
KRH66958 Soybean cytosol, mitochondrion 82.86 81.46
KRH33161 Soybean cytosol 80.19 79.73
Solyc11g065660.1.1 Tomato cytosol 80.38 79.17
KRH71977 Soybean cytosol 78.67 78.67
Solyc01g008440.2.1 Tomato cytosol 79.24 78.05
AT3G57530.1 Thale cress cytosol 78.29 76.39
CDY33817 Canola cytosol 77.9 76.02
CDX67695 Canola cytosol 77.52 75.93
Bra003287.1-P Field mustard cytosol 77.71 75.84
GSMUA_Achr3P29750_001 Banana cytosol 72.19 75.2
GSMUA_AchrUn_... Banana cytosol 71.43 75.15
Bra007334.1-P Field mustard cytosol 77.14 74.86
CDY06098 Canola cytosol 77.14 74.86
GSMUA_Achr8P31440_001 Banana cytosol 72.57 74.85
Zm00001d006621_P006 Maize cytosol 76.76 74.77
TraesCS2B01G227000.1 Wheat cytosol 77.14 74.59
TraesCS2A01G199700.1 Wheat cytosol 77.14 74.59
AT2G41860.1 Thale cress cytosol 75.24 74.53
CDY48773 Canola cytosol 67.24 74.47
EER99568 Sorghum cytosol 76.95 74.4
TraesCS2D01G207400.1 Wheat cytosol 76.95 74.4
GSMUA_Achr4P06930_001 Banana cytosol 68.76 74.28
CDX72022 Canola cytosol 76.38 74.26
Os07t0568600-01 Rice cytosol, plasma membrane 77.71 74.18
Zm00001d021835_P001 Maize cytosol 76.0 74.03
CDY06900 Canola cytosol 74.29 73.45
GSMUA_Achr4P13880_001 Banana cytosol 73.71 73.3
Bra016909.1-P Field mustard cytosol 74.1 73.26
Zm00001d011666_P001 Maize cytosol, plasma membrane 49.52 73.24
CDX79906 Canola cytosol 74.1 73.12
Bra004656.1-P Field mustard cytosol 74.1 73.12
CDY14793 Canola cytosol 67.81 72.95
GSMUA_Achr2P07790_001 Banana cytosol 70.1 72.16
Zm00001d029018_P001 Maize plasma membrane 48.76 72.11
Zm00001d029163_P001 Maize cytosol 24.76 67.36
Solyc03g113390.2.1 Tomato cytosol 67.05 65.43
Solyc09g005550.2.1 Tomato cytosol 64.38 63.89
Zm00001d031188_P002 Maize cytosol 45.33 59.06
Solyc06g073350.2.1 Tomato plastid 58.48 57.28
Solyc06g008830.1.1 Tomato cytosol 10.29 52.94
Solyc10g050080.1.1 Tomato cytosol 14.29 52.82
Solyc08g062990.1.1 Tomato cytosol 14.29 52.82
Solyc04g049100.1.1 Tomato cytosol 13.71 50.7
Solyc10g061860.1.1 Tomato cytosol 13.33 50.0
Solyc05g041110.1.1 Tomato nucleus 10.29 48.21
Solyc12g005030.1.1 Tomato cytosol 32.38 47.22
Zm00001d028016_P001 Maize cytosol 38.67 46.14
Solyc02g083850.2.1 Tomato plastid 40.0 36.84
Solyc03g033540.2.1 Tomato extracellular 39.24 36.46
Solyc02g065070.2.1 Tomato cytosol 40.19 35.7
Solyc10g078390.1.1 Tomato cytosol 38.48 35.19
Solyc01g108400.2.1 Tomato cytosol 38.67 34.52
Solyc02g090510.2.1 Tomato nucleus 39.81 34.43
Solyc01g096350.2.1 Tomato cytosol, nucleus 36.76 32.77
Solyc03g082500.2.1 Tomato nucleus 36.95 32.44
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.4Gene3D:3.30.200.20ncoils:CoilInterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0004683GO:GO:0005488GO:GO:0005509GO:GO:0005515GO:GO:0005516GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005886
GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152
GO:GO:0009719GO:GO:0009738GO:GO:0009931GO:GO:0009987GO:GO:0016020GO:GO:0016301
GO:GO:0016740GO:GO:0018105GO:GO:0019538GO:GO:0035556GO:GO:0046777InterPro:IPR000719
InterPro:IPR002048UniProt:K4D2F4InterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF13499PFAM:PF13833
ScanProsite:PS00018ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50222PANTHER:PTHR24349
PANTHER:PTHR24349:SF126InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00054SMART:SM00220SUPFAM:SSF47473
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASEnsemblPlantsGene:Solyc10g079130.1EnsemblPlants:Solyc10g079130.1.1UniParc:UPI000276A587SEG:seg
Description
No Description!
Coordinates
chr10:-:60740409..60744010
Molecular Weight (calculated)
59633.2 Da
IEP (calculated)
6.256
GRAVY (calculated)
-0.534
Length
525 amino acids
Sequence
(BLAST)
001: MGNCCAVPKT SETEEKKRGK NKPNPFSVDY GHHGNGHKSY VLDNPTGTDI EATYELGREL GRGEFGVTYL STDKVSGEVY ACKSISKKKL RTRVDIEDVR
101: REVEIMKHLP KHPNIVTLKD TYEDDNAVHI VMELCEGGEL FDRIVARGHY TERAAAAVTR TIVEVIQMCH KHGVMHRDLK PENFLFENKK ETAPLKAIDF
201: GLSVFFKPGE RFNEIVGSPY YMAPEVLKRD YGPEVDVWSA GVILYILLCG VPPFWAETEQ GVAQAIIRSV VNFKRDPWPK VSDNAKDLVK KMLNPDPSQR
301: LTAQEVLDHP WIQNAKKAPN VSLGETVKAR LKQFSMMNKL KKRALRVIAE HLTVDEVAGI KEGFQLMDIS NKGKIDVNEL RVGLQKLGHQ IPESDVQILM
401: DVGDVDKDGF LDYGEFVAIS VHLRKMANEE HLKKAFDFFD RNQNGYIEIE ELREALDDEI ETNSEEVINA IMQDVDTDKD GRISYDEFST MMKAGTDWRK
501: ASRQYSRERY NSLSLKLMKD GSLQS
Best Arabidopsis Sequence Match ( AT3G57530.1 )
(BLAST)
001: MGNCCGTAGS LAQNDNKPKK GRKKQNPFSI DYGLHHGGGD GGGRPLKLIV LNDPTGREIE SKYTLGRELG RGEFGVTYLC TDKETDDVFA CKSILKKKLR
101: TAVDIEDVRR EVEIMRHMPE HPNVVTLKET YEDEHAVHLV MELCEGGELF DRIVARGHYT ERAAAAVTKT IMEVVQVCHK HGVMHRDLKP ENFLFGNKKE
201: TAPLKAIDFG LSVFFKPGER FNEIVGSPYY MAPEVLKRNY GPEVDIWSAG VILYILLCGV PPFWAETEQG VAQAIIRSVL DFRRDPWPKV SENAKDLIRK
301: MLDPDQKRRL TAQQVLDHPW LQNAKTAPNV SLGETVRARL KQFTVMNKLK KRALRVIAEH LSDEEASGIR EGFQIMDTSQ RGKINIDELK IGLQKLGHAI
401: PQDDLQILMD AGDIDRDGYL DCDEFIAISV HLRKMGNDEH LKKAFAFFDQ NNNGYIEIEE LREALSDELG TSEEVVDAII RDVDTDKDGR ISYEEFVTMM
501: KTGTDWRKAS RQYSRERFNS ISLKLMQDAS LQVNGDTR
Arabidopsis Description
CPK32Calcium-dependent protein kinase 32 [Source:UniProtKB/Swiss-Prot;Acc:Q6NLQ6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.