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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 2
  • plastid 5
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
 extracellular: 29876421
msms PMID: 29876421 doi
L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400058126 Potato plastid 97.7 97.18
Solyc02g083850.2.1 Tomato plastid 86.73 85.96
KRH08079 Soybean plastid 77.35 82.77
KRH69782 Soybean plastid 76.64 81.7
CDY45213 Canola plastid 75.93 80.79
CDY71104 Canola cytosol 20.0 80.71
Bra012058.1-P Field mustard plastid 75.75 80.6
VIT_04s0023g03420.t01 Wine grape plastid 79.47 80.47
GSMUA_Achr2P00480_001 Banana cytosol 41.95 80.34
AT5G66210.1 Thale cress plastid 74.34 80.31
Bra037181.1-P Field mustard plastid 75.75 79.55
TraesCS2D01G245700.1 Wheat cytosol 71.5 79.37
KRH76656 Soybean plastid 78.94 79.36
CDY30782 Canola plastid 73.45 79.35
Zm00001d005164_P001 Maize cytosol 71.86 79.3
CDY18593 Canola plastid 75.58 79.22
KRH28800 Soybean plastid 78.76 79.18
TraesCS2A01G239900.1 Wheat cytosol 71.15 78.98
Os07t0409900-01 Rice plasma membrane 71.5 78.91
CDX81407 Canola plastid 75.22 78.56
HORVU4Hr1G078080.2 Barley cytosol 36.81 78.49
EER98402 Sorghum cytosol 71.15 78.21
GSMUA_Achr1P08900_001 Banana plastid 73.98 77.99
TraesCS6B01G111800.1 Wheat cytosol 70.27 77.69
TraesCS6A01G089400.2 Wheat cytosol 70.27 77.69
TraesCSU01G016900.1 Wheat cytosol 70.27 77.54
GSMUA_Achr8P19290_001 Banana cytosol 71.86 76.75
Os02t0126400-01 Rice cytosol 70.44 76.25
KXG29360 Sorghum plastid 70.44 75.81
HORVU6Hr1G014700.6 Barley cytosol, mitochondrion, plastid 70.09 75.57
Zm00001d015100_P002 Maize plastid 69.73 75.48
GSMUA_Achr5P18720_001 Banana plastid 72.74 72.49
Solyc06g008830.1.1 Tomato cytosol 10.97 60.78
Solyc08g062990.1.1 Tomato cytosol 14.51 57.75
Solyc04g049100.1.1 Tomato cytosol 14.16 56.34
Solyc10g050080.1.1 Tomato cytosol 14.16 56.34
Solyc10g061860.1.1 Tomato cytosol 13.63 55.0
Solyc05g041110.1.1 Tomato nucleus 10.8 54.46
Solyc01g108400.2.1 Tomato cytosol 44.78 43.03
Solyc12g005030.1.1 Tomato cytosol 26.9 42.22
Solyc10g078390.1.1 Tomato cytosol 42.83 42.16
Solyc02g065070.2.1 Tomato cytosol 44.07 42.13
Solyc02g090510.2.1 Tomato nucleus 43.54 40.53
Solyc03g082500.2.1 Tomato nucleus 42.48 40.13
Solyc09g005550.2.1 Tomato cytosol 37.17 39.7
Solyc01g096350.2.1 Tomato cytosol, nucleus 41.06 39.39
Solyc10g079130.1.1 Tomato nucleus 36.46 39.24
Solyc11g065660.1.1 Tomato cytosol 35.75 37.9
Solyc01g008440.2.1 Tomato cytosol 35.58 37.71
Solyc06g073350.2.1 Tomato plastid 34.51 36.38
Solyc03g113390.2.1 Tomato cytosol 34.51 36.25
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.4Gene3D:3.30.200.20UniProt:C6KGT3InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0004683GO:GO:0005488GO:GO:0005509GO:GO:0005515GO:GO:0005516GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005886
GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152
GO:GO:0009719GO:GO:0009738GO:GO:0009931GO:GO:0009987GO:GO:0016020GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0018105GO:GO:0019538GO:GO:0035556GO:GO:0046777
EMBL:GQ205414InterPro:IPR000719InterPro:IPR002048InterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF13499
ScanProsite:PS00018ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50222PANTHER:PTHR24349
PANTHER:PTHR24349:SF246InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00054SMART:SM00220SUPFAM:SSF47473
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASEnsemblPlantsGene:Solyc03g033540.2EnsemblPlants:Solyc03g033540.2.1UniParc:UPI0001AAB1E0SEG:seg
Description
Calcium-dependent protein kinase [Source:UniProtKB/TrEMBL;Acc:C6KGT3]
Coordinates
chr3:-:5075974..5083464
Molecular Weight (calculated)
63886.9 Da
IEP (calculated)
9.396
GRAVY (calculated)
-0.630
Length
565 amino acids
Sequence
(BLAST)
001: MGSCFSSSKV SGSNSNTPST NNTTTNTNTA VNAHQNRRET SKAPSTTVVN PRNQEGCRDK GNINQKNQQK QPRNSQQNVK PSSRRQGGVI PCGKRTDFGY
101: HKDFEKRYTI GKLLGHGQFG YTYVATDKSS GDRVAVKRIE KNKMVLPIAV EDVKREVKIL KALGGHENVV QFYNSFEDDN YVYIVMELCE GGELLDRILS
201: KKDSRYTEKD AAIVVRQMLK VAAECHLHGL VHRDMKPENF LFKSTKEDSP LKATDFGLSD FIRPGKKFQD IVGSAYYVAP EVLKRRSGPE SDVWSIGVIT
301: YILLCGRRPF WDKTEDGIFK EVLRNKPDFR RKPWSNISNS AKDFVKKILV KDPRARLTAA QALSHPWVRE GGDASEIPLD ISVLSNMRQF VKYSRLKQFA
401: LRALASTLDE EEIADLRDQF SAIDVDKNGV ISLEEMRQAL AKDLPWKMKE SRVLEILQAI DSNTDGLVDF PEFVAATLHV HQLEEHNSTK WQQRSQAAFE
501: KFDVDKDGFI TPEELKMHTG LRGSIDPLLE EADIDKDGKI SISEFRRLLR TASMSSPTVR DSRGM
Best Arabidopsis Sequence Match ( AT2G17890.1 )
(BLAST)
001: MGLCFSSAAK SSGHNRSSRN PHPHPPLTVV KSRPPRSPCS FMAVTIQKDH RTQPRRNATA KKTPTRHTPP HGKVREKVIS NNGRRHGETI PYGKRVDFGY
101: AKDFDHRYTI GKLLGHGQFG YTYVATDKKT GDRVAVKKID KAKMTIPIAV EDVKREVKIL QALTGHENVV RFYNAFEDKN SVYIVMELCE GGELLDRILA
201: RKDSRYSERD AAVVVRQMLK VAAECHLRGL VHRDMKPENF LFKSTEEDSP LKATDFGLSD FIKPGKKFHD IVGSAYYVAP EVLKRRSGPE SDVWSIGVIS
301: YILLCGRRPF WDKTEDGIFK EVLKNKPDFR RKPWPTISNS AKDFVKKLLV KDPRARLTAA QALSHPWVRE GGDASEIPID ISVLNNMRQF VKFSRLKQFA
401: LRALATTLDE EELADLRDQF DAIDVDKNGV ISLEEMRQAL AKDHPWKLKD ARVAEILQAI DSNTDGFVDF GEFVAAALHV NQLEEHDSEK WQQRSRAAFE
501: KFDIDGDGFI TAEELRMHTG LKGSIEPLLE EADIDNDGKI SLQEFRRLLR TASIKSRNVR SPPGYLISRK V
Arabidopsis Description
CPK16Calcium-dependent protein kinase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJR9]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.