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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d005164_P001 Maize cytosol 97.28 97.66
Os07t0409900-01 Rice plasma membrane 91.63 91.99
TraesCS2D01G245700.1 Wheat cytosol 89.49 90.37
TraesCS2A01G239900.1 Wheat cytosol 89.49 90.37
KRH08079 Soybean plastid 78.02 75.95
KXG29360 Sorghum plastid 77.43 75.81
GSMUA_Achr8P19290_001 Banana cytosol 77.82 75.61
KRH69782 Soybean plastid 76.65 74.34
CDY45213 Canola plastid 76.46 74.01
Bra012058.1-P Field mustard plastid 76.26 73.82
AT5G66210.1 Thale cress plastid 75.1 73.81
CDY30782 Canola plastid 74.12 72.85
VIT_04s0023g03420.t01 Wine grape plastid 78.99 72.76
Bra037181.1-P Field mustard plastid 75.88 72.49
CDY18593 Canola plastid 75.88 72.36
KRH76656 Soybean plastid 78.99 72.24
CDX81407 Canola plastid 75.68 71.9
KRH28800 Soybean plastid 78.4 71.71
PGSC0003DMT400009177 Potato plastid 78.21 71.28
GSMUA_Achr5P18720_001 Banana plastid 78.6 71.25
Solyc03g033540.2.1 Tomato extracellular 78.21 71.15
PGSC0003DMT400058126 Potato plastid 78.4 70.95
Solyc02g083850.2.1 Tomato plastid 78.21 70.53
CDY71104 Canola cytosol 19.07 70.0
EER99788 Sorghum cytosol 46.5 40.3
EES19672 Sorghum cytosol 42.22 39.96
EER94810 Sorghum cytosol 45.72 39.7
EES01704 Sorghum cytosol 41.83 39.45
EER99712 Sorghum cytosol 46.11 39.43
EER99568 Sorghum cytosol 41.05 38.86
EER93237 Sorghum cytosol 39.49 38.16
KXG20873 Sorghum cytosol 43.39 35.68
EER93646 Sorghum plastid 40.08 35.15
EES15873 Sorghum mitochondrion 38.72 34.97
OQU80791 Sorghum cytosol, endoplasmic reticulum, plasma membrane 20.04 34.8
KXG38195 Sorghum cytosol 43.19 34.63
EES04099 Sorghum cytosol 37.16 34.29
OQU89769 Sorghum mitochondrion 19.46 30.77
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.4Gene3D:3.30.200.20EntrezGene:8057328UniProt:C5X4C2
EnsemblPlants:EER98402ProteinID:EER98402ProteinID:EER98402.1InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_dom
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004683GO:GO:0005488
GO:GO:0005509GO:GO:0005515GO:GO:0005516GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005886GO:GO:0006464GO:GO:0006468
GO:GO:0006950GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009605
GO:GO:0009607GO:GO:0009719GO:GO:0009738GO:GO:0009931GO:GO:0009987GO:GO:0010857
GO:GO:0016020GO:GO:0016301GO:GO:0016740GO:GO:0018105GO:GO:0019538GO:GO:0035556
GO:GO:0046777GO:GO:0050832InterPro:IPR000719InterPro:IPR002048InterPro:Kinase-like_dom_sfPFAM:PF00069
PFAM:PF13499ScanProsite:PS00018ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50222
PANTHER:PTHR24349PANTHER:PTHR24349:SF87InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00054SMART:SM00220
EnsemblPlantsGene:SORBI_3002G114800SUPFAM:SSF47473SUPFAM:SSF56112unigene:Sbi.8392InterPro:Ser/Thr_kinase_ASUniParc:UPI0001A84028
RefSeq:XP_002461881.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr2:-:14003613..14017732
Molecular Weight (calculated)
57597.8 Da
IEP (calculated)
7.891
GRAVY (calculated)
-0.372
Length
514 amino acids
Sequence
(BLAST)
001: MGLCSSCTAA RAASDPGAAA AGDAAAAAAK KGRGIVACGK RTDFGYDKDF EARYSLGKLL GHGQFGYTFA AVDRASSERV AVKRIDKNKM VLPVAVEDVK
101: REVKILKALQ GHENVVHFYN AFEDDNYVYI VMELCEGGEL LDRILAKKDS RYSEKDAAVV VRQMLKVAAE CHLHGLVHRD MKPENFLFKS TKEDSPLKAT
201: DFGLSDFIKP GRQFRDIVGS AYYVAPEVLK RKSGPESDVW SIGVITYILL CGRRPFWDKT EDGIFKEVLK NKPDFRRKPW PNITSSAKDF VQKLLVKDPR
301: VRLTAAQALS HDWVREGGKA SEIPLDISVL HNMRQFVKYS RFKQFALRAL ASTLNSEELS DLRDQFNAID VDKNGTISLE ELKQALAKDV PWRLKGPRVL
401: EIIEAIDSNT DGLVDFEEFV AATLHMHQLV EHDTEKWKSL SQAAFDKFDV DRDGYITSDE LRMHTGMKGS IDPLLEEADI DKDGKISLDE FRRLLKTASM
501: SARNVQTPRG VRVS
Best Arabidopsis Sequence Match ( AT2G17890.1 )
(BLAST)
001: MGLCFSSAAK SSGHNRSSRN PHPHPPLTVV KSRPPRSPCS FMAVTIQKDH RTQPRRNATA KKTPTRHTPP HGKVREKVIS NNGRRHGETI PYGKRVDFGY
101: AKDFDHRYTI GKLLGHGQFG YTYVATDKKT GDRVAVKKID KAKMTIPIAV EDVKREVKIL QALTGHENVV RFYNAFEDKN SVYIVMELCE GGELLDRILA
201: RKDSRYSERD AAVVVRQMLK VAAECHLRGL VHRDMKPENF LFKSTEEDSP LKATDFGLSD FIKPGKKFHD IVGSAYYVAP EVLKRRSGPE SDVWSIGVIS
301: YILLCGRRPF WDKTEDGIFK EVLKNKPDFR RKPWPTISNS AKDFVKKLLV KDPRARLTAA QALSHPWVRE GGDASEIPID ISVLNNMRQF VKFSRLKQFA
401: LRALATTLDE EELADLRDQF DAIDVDKNGV ISLEEMRQAL AKDHPWKLKD ARVAEILQAI DSNTDGFVDF GEFVAAALHV NQLEEHDSEK WQQRSRAAFE
501: KFDIDGDGFI TAEELRMHTG LKGSIEPLLE EADIDNDGKI SLQEFRRLLR TASIKSRNVR SPPGYLISRK V
Arabidopsis Description
CPK16Calcium-dependent protein kinase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJR9]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.