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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d021139_P008 Maize cytosol, mitochondrion 86.36 83.8
OQU89769 Sorghum mitochondrion 45.96 78.77
OQU80791 Sorghum cytosol, endoplasmic reticulum, plasma membrane 39.5 74.32
HORVU5Hr1G078430.2 Barley mitochondrion 73.79 74.19
TraesCS5A01G298500.1 Wheat mitochondrion 72.89 74.09
TraesCS5D01G305200.1 Wheat mitochondrion 72.89 73.55
TraesCS5B01G297700.1 Wheat mitochondrion 72.89 73.55
Os09t0514200-01 Rice mitochondrion 74.33 71.75
GSMUA_Achr3P21540_001 Banana cytosol 58.17 62.91
EES19672 Sorghum cytosol 53.68 55.06
EES01704 Sorghum cytosol 53.86 55.05
EER99568 Sorghum cytosol 53.5 54.88
EER93237 Sorghum cytosol 51.71 54.14
EES15873 Sorghum mitochondrion 54.58 53.43
VIT_05s0102g00170.t01 Wine grape cytosol 52.96 53.25
PGSC0003DMT400069175 Potato plastid 49.91 51.87
Solyc06g073350.2.1 Tomato plastid 49.73 51.68
CDY10809 Canola cytosol 49.55 51.4
CDY34489 Canola cytosol 49.55 51.3
KRH24650 Soybean mitochondrion, plastid 48.65 50.84
CDX84782 Canola cytosol, plastid 48.83 49.45
CDY23939 Canola cytosol, plastid 48.83 49.45
Bra022844.1-P Field mustard cytosol, plastid 48.83 49.45
KRH29653 Soybean plastid 48.11 49.45
CDY19084 Canola plastid 49.73 48.94
EER93646 Sorghum plastid 50.45 47.95
Bra018236.1-P Field mustard plastid 50.09 47.77
AT2G31500.1 Thale cress plastid 49.91 47.77
CDY15391 Canola plastid 49.37 47.41
Bra021727.1-P Field mustard plasma membrane 49.37 46.69
EER98402 Sorghum cytosol 34.29 37.16
KXG29360 Sorghum plastid 33.93 36.0
EER99788 Sorghum cytosol 31.78 29.85
EER99712 Sorghum cytosol 31.42 29.12
EER94810 Sorghum cytosol 30.88 29.05
KXG20873 Sorghum cytosol 31.06 27.68
KXG38195 Sorghum cytosol 30.52 26.52
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.4Gene3D:3.30.200.20EntrezGene:8059106UniProt:C5XG72
EnsemblPlants:EES04099ProteinID:EES04099ProteinID:EES04099.1InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_dom
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004683GO:GO:0005488
GO:GO:0005509GO:GO:0005515GO:GO:0005516GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005886GO:GO:0006464GO:GO:0006468
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009719GO:GO:0009738
GO:GO:0009931GO:GO:0009987GO:GO:0016020GO:GO:0016301GO:GO:0016740GO:GO:0018105
GO:GO:0019538GO:GO:0035556GO:GO:0046777InterPro:IPR000719InterPro:IPR002048InterPro:Kinase-like_dom_sf
PFAM:PF00069PFAM:PF13499ScanProsite:PS00018ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PFscan:PS50222PANTHER:PTHR24349PANTHER:PTHR24349:SF127InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00054
SMART:SM00220EnsemblPlantsGene:SORBI_3003G400700SUPFAM:SSF47473SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0001A85544
RefSeq:XP_002458979.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr3:-:70925492..70929970
Molecular Weight (calculated)
62653.1 Da
IEP (calculated)
6.828
GRAVY (calculated)
-0.535
Length
557 amino acids
Sequence
(BLAST)
001: MGGCYSVIAA TKLKMLRRGG RGAAAILPVD ASHDDEDPCC SPDHDDVVTC KERKKEGGGR KGRKKQGSIL GDAGTVDPDF SRRYRLGAEL GRGEFGVTRR
101: CEDTATGEAL ACKTLRRKRL LLRRVGPDAD DVRREVEIMR RMSEAGAGRV VSLREACEDD EGVHLVMELC EGGELFDRIF ERQHYSERAA AKLARTIVEV
201: VQLCHENGVM HRDLKPENFL FVNKSEESPL KAIDFGLSVY FKPGDRFTEV VGSGCYMAPE VLKRSYGPEI DVWSAGVILH ILLCGFPPFW GDSDEKIAQS
301: ILRGVINLQK DPWPKVSQSA KDLVKKMLDP DPSTRLTAKQ VLEHPWLKNA DKASNVSLGE VVRSRLKQFS SMNKFKKKAL GVVAMNLPRE EIDKYHQMFH
401: TMDKDNDGNL SLDELKEGFR INGHPVPEEE IKMLLQAGDI HGNGTLDCEE FVTVLLHIKK MSNNDYLPKA FKFFDKDGNG FIEMAELMEA LGDGELKSNE
501: QVVNDIIREV DKDKDGRISY PEFELMMKGG SDWRNASRRY SRENFSSLSR RLCKDTL
Best Arabidopsis Sequence Match ( AT1G18890.1 )
(BLAST)
001: MGNCNACVRP DSKESKPSSK PKKPNRDRKL NPFAGDFTRS PAPIRVLKDV IPMSNQTQIS DKYILGRELG RGEFGITYLC TDRETHEALA CKSISKRKLR
101: TAVDIEDVRR EVAIMSTLPE HPNVVKLKAS YEDNENVHLV MELCEGGELF DRIVARGHYT ERAAAAVART IAEVVMMCHS NGVMHRDLKP ENFLFANKKE
201: NSPLKAIDFG LSVFFKPGDK FTEIVGSPYY MAPEVLKRDY GPGVDVWSAG VIIYILLCGV PPFWAETEQG VALAILRGVL DFKRDPWPQI SESAKSLVKQ
301: MLDPDPTKRL TAQQVLAHPW IQNAKKAPNV PLGDIVRSRL KQFSMMNRFK KKVLRVIAEH LSIQEVEVIK NMFSLMDDDK DGKITYPELK AGLQKVGSQL
401: GEPEIKMLME VADVDGNGFL DYGEFVAVII HLQKIENDEL FKLAFMFFDK DGSTYIELDE LREALADELG EPDASVLSDI MREVDTDKDG RINYDEFVTM
501: MKAGTDWRKA SRQYSRERFK SLSINLMKDG SLHLHDALTG QTVPV
Arabidopsis Description
CPK10Calcium-dependent protein kinase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V8]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.