CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER93074

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41140.1	EER93074	AT4G17750.1	18466301

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G146200.2	Wheat	cytosol	94.1	94.42
TraesCS2D01G150800.1	Wheat	cytosol	94.1	94.1
TraesCS2B01G171600.1	Wheat	cytosol	94.1	94.1
GSMUA_Achr6P16020_001	Banana	cytosol	60.88	84.15
EER94810	Sorghum	cytosol	82.97	83.11
Zm00001d022305_P001	Maize	cytosol	83.14	82.72
Zm00001d007029_P001	Maize	cytosol	82.12	81.44
GSMUA_Achr10P...	Banana	cytosol	78.92	81.25
KRG95088	Soybean	cytosol	56.66	80.77
GSMUA_Achr6P23680_001	Banana	cytosol	76.22	78.88
CDY22505	Canola	cytosol	74.03	77.29
Solyc10g078390.1.1	Tomato	cytosol	74.7	77.18
PGSC0003DMT400021598	Potato	mitochondrion	74.7	77.18
CDY35427	Canola	cytosol	73.69	77.07
Bra000215.1-P	Field mustard	cytosol	73.69	77.07
AT2G41140.1	Thale cress	cytosol	74.7	76.91
KRH33063	Soybean	endoplasmic reticulum, vacuole	44.18	76.83
Bra004600.1-P	Field mustard	cytosol	74.7	76.78
KRH71707	Soybean	cytosol	75.21	76.5
GSMUA_Achr3P18430_001	Banana	cytosol	69.48	76.44
CDX79956	Canola	cytosol	74.37	76.43
AT3G56760.1	Thale cress	cytosol	73.86	75.91
CDY23873	Canola	cytosol	73.86	75.78
VIT_08s0040g01250.t01	Wine grape	cytosol, plastid, vacuole	75.55	75.55
CDY47375	Canola	cytosol, nucleus, plasma membrane	70.99	73.34
CDX76010	Canola	cytosol	70.49	73.33
Bra014673.1-P	Field mustard	cytosol, nucleus, plasma membrane	70.99	73.22
Bra016950.1-P	Field mustard	cytosol	56.66	68.29
CDY57585	Canola	cytosol, mitochondrion	47.39	67.87
EER99712	Sorghum	cytosol	68.47	67.55
CDY06943	Canola	cytosol	50.25	63.95
HORVU2Hr1G025890.1	Barley	cytosol	82.97	61.5
KXG20873	Sorghum	cytosol	60.71	57.6
KXG38195	Sorghum	cytosol	58.52	54.13
EER98402	Sorghum	cytosol	40.3	46.5
KXG29360	Sorghum	plastid	39.46	44.57
EES19672	Sorghum	cytosol	34.23	37.38
EES01704	Sorghum	cytosol	34.23	37.25
EER93237	Sorghum	cytosol	33.05	36.84
EER99568	Sorghum	cytosol	33.05	36.1
EES15873	Sorghum	mitochondrion	33.39	34.8
EER93646	Sorghum	plastid	34.06	34.47
OQU89769	Sorghum	mitochondrion	17.54	32.0
EES04099	Sorghum	cytosol	29.85	31.78
OQU80791	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	15.85	31.76

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.5	Gene3D:3.30.200.20	EntrezGene:8063549	UniProt:C5X3D9
EnsemblPlants:EER99788	ProteinID:EER99788	ProteinID:EER99788.1	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004683	GO:GO:0005488	GO:GO:0005509
GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009738	GO:GO:0009931
GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538
GO:GO:0035556	GO:GO:0046777	InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF157
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3002G393200	SUPFAM:SSF47473	SUPFAM:SSF56112
unigene:Sbi.3763	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A83EA9	RefSeq:XP_002463267.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:-:74598090..74603112

Molecular Weight (calculated)

65500.4 Da

IEP (calculated)

8.669

GRAVY (calculated)

-0.284

Length

593 amino acids

Sequence
(BLAST)

001: MGLCHGKPTQ IPEAEAEEDP HVASGAGDGG DGATSPSAAT APAAKPGTPK QPKFPFYLPS PLPPSSYKGS PANSSVASTP ARGGFKRPFP PPSPAKHIRA
101: LLARRHGSVK PNEASIPEGG EPELGLDKSF GFSKHFFARY DLGEEVGRGH FGYTCSAKAK KGEHKGQDVA VKVIPKAKMT TAIAIEDVRR EVRILSSLTG
201: HSNLVQFYDA FEDEDNVYIV MELCKGGELL DRILARGGKY SEEDAKVVMV QILSVVSFCH LQGVVHRDLK PENFLFSSKE ENSPLKVIDF GLSDFVKPDE
301: RLNDIVGSAY YVAPEVLHRS YGTEADMWSI GVIAYILLCG SRPFWARTES GIFRAVLKAE PSFDEAPWPT LTAEAKDFVK RLLNKDYRKR MTAAQALSHP
401: WIRNAQQVKV PLDMIIYKLM RAYISSSSLR KSALRALAKT LTTNQLFYVR EQFELLGPNK NGYISLQNLK SALVKNSTDA MKDSRVVDFV NTVCTLQYRK
501: LDFEEFAASA ISVYQMEALE TWEQHARRAY DLFDKEGNRP IVIEELASEL GLGPSVPLHV VLQDWIRHAD GKLSFLGFIK LLHGVSSRSI PKA

Best Arabidopsis Sequence Match ( AT2G41140.1 )
(BLAST)

001: MGICHGKPVE QQSKSLPVSG ETNEAPTNSQ PPAKSSGFPF YSPSPVPSLF KSSPSVSSSV SSTPLRIFKR PFPPPSPAKH IRAFLARRYG SVKPNEVSIP
101: EGKECEIGLD KSFGFSKQFA SHYEIDGEVG RGHFGYTCSA KGKKGSLKGQ EVAVKVIPKS KMTTAIAIED VSREVKMLRA LTGHKNLVQF YDAFEDDENV
201: YIVMELCKGG ELLDKILQRG GKYSEDDAKK VMVQILSVVA YCHLQGVVHR DLKPENFLFS TKDETSPLKA IDFGLSDYVK PDERLNDIVG SAYYVAPEVL
301: HRTYGTEADM WSIGVIAYIL LCGSRPFWAR TESGIFRAVL KAEPNFEEAP WPSLSPEAVD FVKRLLNKDY RKRLTAAQAL CHPWLVGSHE LKIPSDMIIY
401: KLVKVYIMST SLRKSALAAL AKTLTVPQLA YLREQFTLLG PSKNGYISMQ NYKTAILKSS TDAMKDSRVF DFVHMISCLQ YKKLDFEEFC ASALSVYQLE
501: AMETWEQHAR RAYELFEKDG NRPIMIEELA SELGLGPSVP VHVVLQDWIR HSDGKLSFLG FVRLLHGVSS RTLQKA

Arabidopsis Description

CRK1CDPK-related kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O80673]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.