CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 1
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX78797
CDY60785

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41140.1	CDX78797	AT4G17750.1	18466301
AT2G41140.1	CDY60785	AT4G17750.1	18466301

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000215.1-P	Field mustard	cytosol	98.94	98.94
CDY22505	Canola	cytosol	98.06	97.89
CDX79956	Canola	cytosol	94.71	93.07
CDY23873	Canola	cytosol	94.36	92.56
AT2G41140.1	Thale cress	cytosol	93.65	92.19
CDY47375	Canola	cytosol, nucleus, plasma membrane	87.13	86.06
CDX76010	Canola	cytosol	85.54	85.09
KRG95088	Soybean	cytosol	61.73	84.13
KRH33063	Soybean	endoplasmic reticulum, vacuole	48.5	80.65
GSMUA_Achr6P16020_001	Banana	cytosol	60.49	79.95
CDY57585	Canola	cytosol, mitochondrion	58.38	79.95
Os07t0641200-01	Rice	plasma membrane	36.68	79.39
KRH71707	Soybean	cytosol	81.48	79.25
Solyc10g078390.1.1	Tomato	cytosol	79.54	78.57
PGSC0003DMT400021598	Potato	mitochondrion	79.01	78.05
HORVU7Hr1G066710.3	Barley	cytosol	23.28	77.19
Os03t0366200-01	Rice	cytosol, plasma membrane	38.8	76.12
HORVU6Hr1G016380.1	Barley	cytosol	22.93	76.02
CDY06943	Canola	cytosol	62.26	75.75
VIT_08s0040g01250.t01	Wine grape	cytosol, plastid, vacuole	79.01	75.55
GSMUA_Achr10P...	Banana	cytosol	76.37	75.17
HORVU3Hr1G026700.1	Barley	plasma membrane	18.52	75.0
GSMUA_Achr6P23680_001	Banana	cytosol	74.6	73.82
TraesCS2A01G146200.2	Wheat	cytosol	76.9	73.77
EER99788	Sorghum	cytosol	77.07	73.69
TraesCS2B01G171600.1	Wheat	cytosol	76.9	73.52
TraesCS2D01G150800.1	Wheat	cytosol	76.9	73.52
GSMUA_Achr3P18430_001	Banana	cytosol	69.31	72.91
HORVU5Hr1G097280.1	Barley	extracellular, plasma membrane	11.82	71.28
CDY69753	Canola	cytosol, plastid	65.96	70.04
EER94810	Sorghum	cytosol	73.02	69.93
CDY52824	Canola	cytosol	72.66	69.36
CDY65651	Canola	cytosol	71.43	69.23
CDY65016	Canola	cytosol	72.31	69.02
HORVU1Hr1G005350.3	Barley	endoplasmic reticulum, plasma membrane	23.46	68.91
Zm00001d047428_P001	Maize	cytosol	72.31	68.56
CDY18568	Canola	cytosol, plastid	65.78	62.79
CDX95464	Canola	cytosol, plastid	65.26	62.5
CDX99267	Canola	cytosol	65.43	62.25
CDX92303	Canola	cytosol	65.26	62.08
Zm00001d022305_P001	Maize	cytosol	64.9	61.74
CDX82311	Canola	cytosol	64.2	61.49
Zm00001d007029_P001	Maize	cytosol	64.55	61.2
Zm00001d029264_P004	Maize	cytosol	72.31	61.19
CDY22990	Canola	cytosol	63.84	60.94
CDX77233	Canola	cytosol, plastid	62.26	59.73
CDY16510	Canola	cytosol, plastid	62.08	59.06
CDY27530	Canola	cytosol	60.49	57.55
CDY48019	Canola	cytosol	60.49	57.55
CDY19836	Canola	cytosol	57.85	56.55
CDX87128	Canola	cytosol	57.67	56.38
CDX88104	Canola	cytosol	56.61	55.06
CDX80445	Canola	cytosol	56.44	54.89
CDY08129	Canola	cytosol	57.32	54.62
CDY05930	Canola	cytosol	57.14	54.18
HORVU2Hr1G025890.1	Barley	cytosol	72.13	51.12
CDY00200	Canola	cytosol	57.5	49.92
CDX86978	Canola	cytosol	56.97	49.77
CDX87112	Canola	cytosol	23.46	45.86
CDY45213	Canola	plastid	41.8	44.63
CDY30782	Canola	plastid	40.92	44.36
CDY18593	Canola	plastid	41.27	43.41
CDY38141	Canola	cytosol, plastid	43.74	43.21
CDY63401	Canola	cytosol, plastid	43.74	43.06
CDX81407	Canola	plastid	40.92	42.88
CDX72575	Canola	cytosol	40.74	42.7
CDY47052	Canola	cytosol	40.56	42.51
CDY29208	Canola	plastid	43.56	42.44
CDY07808	Canola	plastid	43.39	42.12
CDY40640	Canola	cytosol	15.34	38.84
CDX92529	Canola	cytosol	36.16	38.39
CDY42266	Canola	cytosol	35.8	38.02
CDY44918	Canola	cytosol	35.63	37.83
CDY14001	Canola	cytosol	35.27	37.74
CDY53966	Canola	cytosol	35.27	37.59
CDX97205	Canola	cytosol	35.45	37.57
CDY48773	Canola	cytosol	31.22	37.34
CDX67695	Canola	cytosol	34.22	36.19
CDY33817	Canola	cytosol	34.22	36.06
CDX72022	Canola	cytosol	34.22	35.93
CDY06098	Canola	cytosol	34.22	35.86
CDY14793	Canola	cytosol	30.34	35.25
CDX73684	Canola	cytosol	32.8	35.23
CDX78044	Canola	cytosol, nucleus, plasma membrane	32.63	35.04
CDY23165	Canola	cytosol	32.63	35.04
CDY45391	Canola	cytosol	33.69	34.98
CDX79906	Canola	cytosol	32.8	34.96
CDX95303	Canola	cytosol	32.45	34.85
CDY29049	Canola	cytosol	32.45	34.85
CDY06900	Canola	cytosol	32.63	34.84
CDX73108	Canola	cytosol	33.51	34.73
CDX90631	Canola	cytosol	32.28	34.59
CDY10809	Canola	cytosol	32.63	34.45
CDX81903	Canola	cytosol, plastid	32.98	34.44
CDY21691	Canola	cytosol, plastid	33.16	34.37
CDY34489	Canola	cytosol	32.45	34.2
CDY16652	Canola	cytosol	28.04	33.76
CDX84782	Canola	cytosol, plastid	32.63	33.64
CDY23939	Canola	cytosol, plastid	32.63	33.64
CDY19084	Canola	plastid	33.51	33.57
CDY15391	Canola	plastid	33.51	32.76
CDY71104	Canola	cytosol	7.76	31.43
CDY26714	Canola	cytosol	32.98	30.71
CDY19259	Canola	cytosol, plastid	32.98	30.51
CDY10803	Canola	cytosol	20.63	26.29
CDX94570	Canola	cytosol	27.69	21.16
CDY24762	Canola	cytosol	7.76	19.47

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.5	Gene3D:3.30.200.20	GO:A0A078HCA8	UniProt:A0A078HCA8
EnsemblPlants:CDY35427	ProteinID:CDY35427	ProteinID:CDY35427.1	InterPro:EF-hand-dom_pair	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00058424001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24349	PANTHER:PTHR24349:SF92	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE7BB3	SEG:seg	:

Description

BnaA03g19330DBnaA03g19330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCA8]

Coordinates

chrLK032351:-:314827..317883

Molecular Weight (calculated)

63462.6 Da

IEP (calculated)

8.730

GRAVY (calculated)

-0.209

Length

567 amino acids

Sequence
(BLAST)

001: MGICHGKPIE QQSKQSTSVS SDQTPAKSSG FPFYSPSPLP SLFKPSPASA SSTPLRIFKR PFPPPSPAKH IRAFLARRNG STNKPNEVSI PEGKEFEIGL
101: DKSFGFSKHF ASHYEIDGEV GRGHFGYTCS AKGKTGSLKG QEVAVKVIPK SKMTTAIAIE DVCREVKILR ALTGHKNLVQ FYDAFEDDEN VYIVMELCKG
201: GELLDKILQR GGKYTEEDAK QVMVQILSVV AYCHLQGVVH RDLKPENFLF STKDETSPLK AIDFGLSDYV KPDERLNDIV GSAYYVAPEV LHRTYGTEAD
301: MWSIGVIAYI LLCGSRPFWA RTESGIFRAV LKSVPNFEEA PWPSLSPDAV DFVKRLLNKD YRKRLTAAQA LCHPWLVGSH ELKIPCDMII YKLVKVYIMS
401: TSLRKSALVA LAKTLTVPQL AYLREQFTLL GPSKNGYISM QNYKTAILKS ATDAMKDSRV IDFVHMISCL QYKKLDFEEF CASALSVYQM EAMETWEQHA
501: RRAYELFEKD GNRPIMIEEL ASELGLGPSV PVHVVLQDWI RHSDGKLSFL GFVRLLHGVS SRTLHKA

Best Arabidopsis Sequence Match ( AT2G41140.1 )
(BLAST)

001: MGICHGKPVE QQSKSLPVSG ETNEAPTNSQ PPAKSSGFPF YSPSPVPSLF KSSPSVSSSV SSTPLRIFKR PFPPPSPAKH IRAFLARRYG SVKPNEVSIP
101: EGKECEIGLD KSFGFSKQFA SHYEIDGEVG RGHFGYTCSA KGKKGSLKGQ EVAVKVIPKS KMTTAIAIED VSREVKMLRA LTGHKNLVQF YDAFEDDENV
201: YIVMELCKGG ELLDKILQRG GKYSEDDAKK VMVQILSVVA YCHLQGVVHR DLKPENFLFS TKDETSPLKA IDFGLSDYVK PDERLNDIVG SAYYVAPEVL
301: HRTYGTEADM WSIGVIAYIL LCGSRPFWAR TESGIFRAVL KAEPNFEEAP WPSLSPEAVD FVKRLLNKDY RKRLTAAQAL CHPWLVGSHE LKIPSDMIIY
401: KLVKVYIMST SLRKSALAAL AKTLTVPQLA YLREQFTLLG PSKNGYISMQ NYKTAILKSS TDAMKDSRVF DFVHMISCLQ YKKLDFEEFC ASALSVYQLE
501: AMETWEQHAR RAYELFEKDG NRPIMIEELA SELGLGPSVP VHVVLQDWIR HSDGKLSFLG FVRLLHGVSS RTLQKA

Arabidopsis Description

CRK1CDPK-related kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O80673]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.