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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra036512.1-P Field mustard cytosol 99.48 99.48
CDX87128 Canola cytosol 97.93 97.93
AT5G24430.1 Thale cress cytosol 93.97 91.75
CDX88104 Canola cytosol 88.1 87.65
CDX80445 Canola cytosol 87.93 87.48
CDY08129 Canola cytosol 84.31 82.18
CDY05930 Canola cytosol 84.31 81.77
CDX86978 Canola cytosol 85.69 76.58
CDY00200 Canola cytosol 86.03 76.42
CDX87112 Canola cytosol 35.86 71.72
KRH64343 Soybean cytosol 70.0 68.01
KRH53593 Soybean cytosol 70.0 67.78
VIT_16s0098g01140.t01 Wine grape cytosol 66.9 65.54
Solyc03g082500.2.1 Tomato nucleus 67.24 65.22
PGSC0003DMT400008340 Potato cytosol 66.55 64.55
GSMUA_Achr9P20900_001 Banana cytosol 59.14 63.17
GSMUA_Achr7P05810_001 Banana cytosol 59.14 62.71
GSMUA_Achr3P12500_001 Banana cytosol 57.93 62.22
GSMUA_Achr1P04170_001 Banana cytosol 58.28 62.13
CDY27530 Canola cytosol 63.62 61.91
CDY48019 Canola cytosol 63.45 61.74
GSMUA_AchrUn_... Banana cytosol 56.72 61.38
Zm00001d036416_P001 Maize plasma membrane 64.14 61.18
GSMUA_Achr2P03380_001 Banana cytosol 56.55 60.97
TraesCS7A01G384500.1 Wheat cytosol 64.66 60.29
TraesCS7B01G287100.1 Wheat cytosol 64.66 60.29
TraesCS7D01G380900.1 Wheat cytosol 64.66 60.29
HORVU7Hr1G091360.1 Barley cytosol 64.66 60.19
KXG20873 Sorghum cytosol 64.66 60.0
Os06t0714200-01 Rice plasma membrane 63.97 59.55
HORVU1Hr1G047350.2 Barley cytosol 62.76 58.05
CDY69753 Canola cytosol, plastid 53.45 58.05
CDY35427 Canola cytosol 56.55 57.85
TraesCS1B01G201900.1 Wheat cytosol 62.41 57.46
TraesCS1D01G176900.1 Wheat cytosol 62.41 57.46
CDY22505 Canola cytosol 56.21 57.39
TraesCS1A01G178400.1 Wheat cytosol 62.24 57.3
CDY65651 Canola cytosol 57.76 57.27
CDX79956 Canola cytosol 56.9 57.19
CDY23873 Canola cytosol 56.55 56.75
CDY52824 Canola cytosol 57.93 56.57
CDY65016 Canola cytosol 57.93 56.57
KXG38195 Sorghum cytosol 62.41 56.47
Zm00001d014773_P001 Maize cytosol 53.62 56.44
CDY47375 Canola cytosol, nucleus, plasma membrane 55.0 55.57
CDX76010 Canola cytosol 54.14 55.09
CDX95464 Canola cytosol, plastid 55.52 54.39
Zm00001d032473_P001 Maize cytosol 51.9 54.23
CDY18568 Canola cytosol, plastid 55.34 54.04
CDX92303 Canola cytosol 55.34 53.86
CDX82311 Canola cytosol 54.83 53.72
CDY22990 Canola cytosol 54.83 53.54
CDX99267 Canola cytosol 55.0 53.52
CDY57585 Canola cytosol, mitochondrion 37.59 52.66
CDX77233 Canola cytosol, plastid 53.62 52.62
CDY16510 Canola cytosol, plastid 53.79 52.35
Zm00001d013868_P001 Maize cytosol 47.24 51.7
Os10t0510700-00 Rice plasma membrane 62.93 50.0
CDY06943 Canola cytosol 39.48 49.14
CDY45213 Canola plastid 37.93 41.43
CDY30782 Canola plastid 37.07 41.11
CDY18593 Canola plastid 38.1 41.0
CDX72575 Canola cytosol 38.1 40.85
CDX81407 Canola plastid 37.93 40.67
CDY47052 Canola cytosol 37.76 40.48
CDY38141 Canola cytosol, plastid 39.48 39.9
CDY63401 Canola cytosol, plastid 39.48 39.76
CDY29208 Canola plastid 39.14 39.0
CDY07808 Canola plastid 38.97 38.7
CDY40640 Canola cytosol 13.62 35.27
CDX92529 Canola cytosol 31.21 33.9
CDY48773 Canola cytosol 27.59 33.76
CDY14001 Canola cytosol 30.52 33.4
CDY42266 Canola cytosol 30.69 33.33
CDY44918 Canola cytosol 30.52 33.15
CDY16652 Canola cytosol 26.9 33.12
CDX72022 Canola cytosol 30.52 32.78
CDX73684 Canola cytosol 29.83 32.77
CDX78044 Canola cytosol, nucleus, plasma membrane 29.66 32.58
CDX95303 Canola cytosol 29.66 32.58
CDY23165 Canola cytosol 29.66 32.58
CDY06098 Canola cytosol 30.34 32.53
CDX67695 Canola cytosol 30.0 32.46
CDY29049 Canola cytosol 29.48 32.39
CDY33817 Canola cytosol 30.0 32.34
CDY53966 Canola cytosol 29.66 32.33
CDX90631 Canola cytosol 29.48 32.33
CDX97205 Canola cytosol 29.66 32.15
CDX81903 Canola cytosol, plastid 29.83 31.86
CDY21691 Canola cytosol, plastid 29.83 31.63
CDX79906 Canola cytosol 28.97 31.58
CDY10809 Canola cytosol 29.14 31.47
CDY34489 Canola cytosol 28.97 31.23
CDX84782 Canola cytosol, plastid 29.48 31.09
CDY23939 Canola cytosol, plastid 29.48 31.09
CDY45391 Canola cytosol 29.14 30.95
CDY14793 Canola cytosol 25.86 30.74
CDX73108 Canola cytosol 28.97 30.71
CDY19084 Canola plastid 29.48 30.21
CDY06900 Canola cytosol 27.59 30.13
CDY15391 Canola plastid 29.83 29.83
CDY26714 Canola cytosol 29.66 28.24
CDY19259 Canola cytosol, plastid 29.66 28.06
CDY10803 Canola cytosol 21.38 27.87
CDY71104 Canola cytosol 6.55 27.14
CDY24762 Canola cytosol 8.28 21.24
TraesCS4A01G458300.1 Wheat cytosol 58.62 20.74
CDX94570 Canola cytosol 26.21 20.49
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.5Gene3D:3.30.200.20GO:A0A078G3A9UniProt:A0A078G3A9
EnsemblPlants:CDY19836ProteinID:CDY19836ProteinID:CDY19836.1InterPro:EF-hand-dom_pairGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00009599001InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR24349PANTHER:PTHR24349:SF186InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SUPFAM:SSF47473SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EE2EACSEG:seg:
Description
BnaA09g04890DBnaA09g04890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G3A9]
Coordinates
chrLK032100:+:608983..612776
Molecular Weight (calculated)
65038.1 Da
IEP (calculated)
9.096
GRAVY (calculated)
-0.362
Length
580 amino acids
Sequence
(BLAST)
001: MGLCYSRNTS SVKDDEIPVE QPSQTPRLAS IPQSPVPSEV NSYASSPFQS PLPAGVAPSP ARTPGRKFKW PFPPPSPAKP IMAALRRRRG APPRPRDEPI
101: PEDSEDVDGV GGERLDKNFG FGKNMEGKYE MGKEVGRGHF GHTCWAKAKK GKMKGQTVAV KIISKAKMTS ALSIEDVRRE VKLLKALSGH KHMVKFYDVY
201: EDNDNVYVVM ELCEGGELLD RILARGGKYP EVDAKRILVQ ILSATAFFHL QGVVHRDLKP ENFLFTSRNE DAVLKVIDFG LSDFIRYDQR LNDVVGSAYY
301: VAPEVLHRSY STEADMWSIG VISYILLCGS RPFYGRTESA IFRCVLRANP NFEDMPWPSI SPTGKDFVKR LLNKDHRKRM TAAQALAHPW LRDENPGLLL
401: DFSVYKLVRS YIRASPFRRS ALKALAKAIP DEELVFLKAQ FMLLDPKDGG LSLNNFTTAL TRYATDAMME SKLPDILNTM QPLVQKKLDF EEFCAAGVSV
501: YQLEALEEWE QIATSAFEHF EQEGNRVISV QELAGEMSVG PNAYPLLKDW IRSSDGKLSF LGYAKFLHGV TVRSSSSRPR
Best Arabidopsis Sequence Match ( AT5G24430.1 )
(BLAST)
001: MGHCYSRNIS AVEDDEIPTG NGEVSNQPSQ NHRHASIPQS PVASGTPEVN SYNISPFQSP LPAGVAPSPA RTPGRKFKWP FPPPSPAKPI MAALRRRRGA
101: PPQPRDEPIP EDSEDVVDHG GDSGGGERLD KNFGFGKNFE GKYELGKEVG RGHFGHTCWA KAKKGKMKNQ TVAVKIISKA KMTSTLSIED VRREVKLLKA
201: LSGHRHMVKF YDVYEDADNV FVVMELCEGG ELLDRILARG GRYPEVDAKR ILVQILSATA FFHLQGVVHR DLKPENFLFT SRNEDAILKV IDFGLSDFIR
301: YDQRLNDVVG SAYYVAPEVL HRSYSTEADM WSIGVISYIL LCGSRPFYGR TESAIFRCVL RANPNFEDMP WPSISPTAKD FVKRLLNKDH RKRMTAAQAL
401: AHPWLRDENP GLLLDFSVYK LVKSYIRASP FRRSALKALS KAIPDEELVF LKAQFMLLDP KDGGLSLNCF TMALTRYATD AMMESRLPDI LNTMQPLAQK
501: KLDFEEFCAA AVSVYQLEAL EEWEQIATSA FEHFEHEGNR IISVQELAGE MSVGPSAYPL LKDWIRSSDG KLSFLGYAKF LHGVTVRSSS SRPR
Arabidopsis Description
CRK4CDPK-related kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIM9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.